RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ZNF326Q5BKZ1 582 aaKnown RBP27.17■■□□□ 1.94
PVT1-220ENST00000524165 RALGAPBQ86X10 1494 aa27.17■■□□□ 1.94
PVT1-220ENST00000524165 FAM50AQ14320 339 aaKnown RBP27.15■■□□□ 1.94
PVT1-220ENST00000524165 NPHP3Q7Z494 1330 aa27.15■■□□□ 1.94
PVT1-220ENST00000524165 NEXMIFQ5QGS0 1516 aa27.14■■□□□ 1.94
PVT1-220ENST00000524165 PXDNQ92626 1479 aa27.13■■□□□ 1.93
PVT1-220ENST00000524165 UNC5CLQ8IV45 518 aa27.13■■□□□ 1.93
PVT1-220ENST00000524165 SLIT2O94813 1529 aa27.12■■□□□ 1.93
PVT1-220ENST00000524165 PRAG1Q86YV5 1406 aa27.12■■□□□ 1.93
PVT1-220ENST00000524165 ROBO2Q9HCK4 1378 aa27.11■■□□□ 1.93
PVT1-220ENST00000524165 NUP155O75694 1391 aa27.1■■□□□ 1.93
PVT1-220ENST00000524165 HRCP23327 699 aa27.09■■□□□ 1.93
PVT1-220ENST00000524165 ROCK1Q13464 1354 aa27.07■■□□□ 1.92
PVT1-220ENST00000524165 HFM1A2PYH4 1435 aa27.06■■□□□ 1.92
PVT1-220ENST00000524165 PSDA5PKW4 1024 aaPredicted RBP27.05■■□□□ 1.92
PVT1-220ENST00000524165 ESCO1Q5FWF5 840 aa27.05■■□□□ 1.92
PVT1-220ENST00000524165 SEPT12Q8IYM1 358 aa27.05■■□□□ 1.92
PVT1-220ENST00000524165 CDC42BPGQ6DT37 1551 aa27.05■■□□□ 1.92
PVT1-220ENST00000524165 LOC105371045A0A1W2PR82 267 aa27.04■■□□□ 1.92
PVT1-220ENST00000524165 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
PVT1-220ENST00000524165 KIF1BO60333 1816 aa27.02■■□□□ 1.92
PVT1-220ENST00000524165 FOXO3O43524 673 aa27.01■■□□□ 1.91
PVT1-220ENST00000524165 ONECUT3O60422 494 aaPredicted RBP27.01■■□□□ 1.91
PVT1-220ENST00000524165 USP32Q8NFA0 1604 aa27.01■■□□□ 1.91
PVT1-220ENST00000524165 BAG6P46379 1132 aa27■■□□□ 1.91
PVT1-220ENST00000524165 CLTCL1P53675 1640 aa27■■□□□ 1.91
PVT1-220ENST00000524165 XPCQ01831 940 aaPredicted RBP26.99■■□□□ 1.91
PVT1-220ENST00000524165 KRT27Q7Z3Y8 459 aa26.99■■□□□ 1.91
PVT1-220ENST00000524165 VPS72Q15906 364 aa26.98■■□□□ 1.91
PVT1-220ENST00000524165 NWD2Q9ULI1 1742 aa26.98■■□□□ 1.91
PVT1-220ENST00000524165 VGFO15240 615 aaPredicted RBP26.95■■□□□ 1.9
PVT1-220ENST00000524165 PLCH1Q4KWH8 1693 aa26.94■■□□□ 1.9
PVT1-220ENST00000524165 SPATA31A3Q5VYP0 1347 aa26.93■■□□□ 1.9
PVT1-220ENST00000524165 RGPD1P0DJD0 1748 aa26.91■■□□□ 1.9
PVT1-220ENST00000524165 KIF1AQ12756 1690 aa26.89■■□□□ 1.89
PVT1-220ENST00000524165 YY1P25490 414 aa26.88■■□□□ 1.89
PVT1-220ENST00000524165 CCDC144AA2RUR9 1427 aa26.88■■□□□ 1.89
PVT1-220ENST00000524165 CCDC9Q9Y3X0 531 aaKnown RBP26.87■■□□□ 1.89
PVT1-220ENST00000524165 NAIPQ13075 1403 aa26.87■■□□□ 1.89
PVT1-220ENST00000524165 R3HDM1Q15032 1099 aaKnown RBP26.86■■□□□ 1.89
PVT1-220ENST00000524165 EN1Q05925 392 aaPredicted RBP26.84■■□□□ 1.89
PVT1-220ENST00000524165 DISP2A7MBM2 1401 aa26.83■■□□□ 1.89
PVT1-220ENST00000524165 HAP1P54257 671 aaPredicted RBP26.83■■□□□ 1.89
PVT1-220ENST00000524165 PPLO60437 1756 aa26.83■■□□□ 1.89
PVT1-220ENST00000524165 RPGRIP1LQ68CZ1 1315 aa26.83■■□□□ 1.89
PVT1-220ENST00000524165 ABCA3Q99758 1704 aa26.82■■□□□ 1.88
PVT1-220ENST00000524165 FMN2Q9NZ56 1722 aa26.82■■□□□ 1.88
PVT1-220ENST00000524165 NUTM2FA1L443 756 aa26.81■■□□□ 1.88
PVT1-220ENST00000524165 KRT28Q7Z3Y7 464 aa26.8■■□□□ 1.88
PVT1-220ENST00000524165 TNS3Q68CZ2 1445 aa26.8■■□□□ 1.88
PVT1-220ENST00000524165 A0A0G2JS52 829 aa26.79■■□□□ 1.88
PVT1-220ENST00000524165 MYT1Q01538 1121 aa26.79■■□□□ 1.88
PVT1-220ENST00000524165 TNS1Q9HBL0 1735 aaKnown RBP26.79■■□□□ 1.88
PVT1-220ENST00000524165 NRAPQ86VF7 1730 aa26.77■■□□□ 1.88
PVT1-220ENST00000524165 TECPR2O15040 1411 aa26.77■■□□□ 1.88
PVT1-220ENST00000524165 CABLES1Q8TDN4 633 aa26.76■■□□□ 1.87
PVT1-220ENST00000524165 FAM98CQ17RN3 349 aaKnown RBP26.75■■□□□ 1.87
PVT1-220ENST00000524165 PSME1Q06323 249 aa26.74■■□□□ 1.87
PVT1-220ENST00000524165 WAPLQ7Z5K2 1190 aa26.73■■□□□ 1.87
PVT1-220ENST00000524165 KNDC1Q76NI1 1749 aa26.73■■□□□ 1.87
PVT1-220ENST00000524165 RGPD8O14715 1765 aaPredicted RBP26.72■■□□□ 1.87
PVT1-220ENST00000524165 FAM83GA6ND36 823 aa26.72■■□□□ 1.87
PVT1-220ENST00000524165 ADGRB2O60241 1585 aa26.71■■□□□ 1.87
PVT1-220ENST00000524165 SBNO1A3KN83 1393 aa26.71■■□□□ 1.87
PVT1-220ENST00000524165 ARHGEF10O15013 1369 aa26.71■■□□□ 1.87
PVT1-220ENST00000524165 EZH2Q15910 746 aaKnown RBP26.7■■□□□ 1.86
PVT1-220ENST00000524165 ABCC11Q96J66 1382 aa26.68■■□□□ 1.86
PVT1-220ENST00000524165 IFT172Q9UG01 1749 aa26.68■■□□□ 1.86
PVT1-220ENST00000524165 THSD7AQ9UPZ6 1657 aa26.67■■□□□ 1.86
PVT1-220ENST00000524165 ITGAEP38570 1179 aa26.67■■□□□ 1.86
PVT1-220ENST00000524165 FAM182BQ5T319 152 aa26.67■■□□□ 1.86
PVT1-220ENST00000524165 CAMKK2Q96RR4 588 aa26.67■■□□□ 1.86
PVT1-220ENST00000524165 STK26Q9P289 416 aa26.66■■□□□ 1.86
PVT1-220ENST00000524165 PHF8Q9UPP1 1060 aa26.66■■□□□ 1.86
PVT1-220ENST00000524165 PARD3Q8TEW0 1356 aa26.66■■□□□ 1.86
PVT1-220ENST00000524165 COL14A1Q05707 1796 aaKnown RBP26.66■■□□□ 1.86
PVT1-220ENST00000524165 PLEKHH1Q9ULM0 1364 aa26.65■■□□□ 1.86
PVT1-220ENST00000524165 NRXN1Q9ULB1 1477 aa26.64■■□□□ 1.86
PVT1-220ENST00000524165 PLEKHG5O94827 1062 aa26.64■■□□□ 1.86
PVT1-220ENST00000524165 BTG4Q9NY30 223 aa26.64■■□□□ 1.86
PVT1-220ENST00000524165 LMOD2Q6P5Q4 547 aa26.63■■□□□ 1.85
PVT1-220ENST00000524165 RREB1Q92766 1687 aa26.62■■□□□ 1.85
PVT1-220ENST00000524165 SPATA31A5Q5VU36 1347 aa26.62■■□□□ 1.85
PVT1-220ENST00000524165 SPATA31A7Q8IWB4 1347 aa26.62■■□□□ 1.85
PVT1-220ENST00000524165 DCAF8L1A6NGE4 600 aa26.61■■□□□ 1.85
PVT1-220ENST00000524165 ADGRF5Q8IZF2 1346 aa26.59■■□□□ 1.85
PVT1-220ENST00000524165 RRBP1Q9P2E9 1410 aaKnown RBP26.58■■□□□ 1.85
PVT1-220ENST00000524165 NUP188Q5SRE5 1749 aa26.58■■□□□ 1.85
PVT1-220ENST00000524165 FAM196AQ6ZSG2 479 aa26.57■■□□□ 1.84
PVT1-220ENST00000524165 NINLQ9Y2I6 1382 aa26.57■■□□□ 1.84
PVT1-220ENST00000524165 TRIM37O94972 964 aa26.56■■□□□ 1.84
PVT1-220ENST00000524165 SIRT1Q96EB6 747 aa26.56■■□□□ 1.84
PVT1-220ENST00000524165 TRPM3Q9HCF6 1732 aaPredicted RBP26.54■■□□□ 1.84
PVT1-220ENST00000524165 APBA3O96018 575 aa26.54■■□□□ 1.84
PVT1-220ENST00000524165 PPP1R1BQ9UD71 204 aaPredicted RBP26.54■■□□□ 1.84
PVT1-220ENST00000524165 YTHDC2Q9H6S0 1430 aaKnown RBP26.54■■□□□ 1.84
PVT1-220ENST00000524165 NBPF8Q3BBV2 869 aa26.53■■□□□ 1.84
PVT1-220ENST00000524165 NBPF14Q5TI25 921 aa26.53■■□□□ 1.84
PVT1-220ENST00000524165 TMEM132EQ6IEE7 984 aa26.53■■□□□ 1.84
PVT1-220ENST00000524165 SPON1Q9HCB6 807 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms