RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 VPS8Q8N3P4 1428 aa15.39■□□□□ 0.05
NDRG1-228ENST00000523931 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
NDRG1-228ENST00000523931 SEPT12Q8IYM1 358 aa15.38■□□□□ 0.05
NDRG1-228ENST00000523931 ANKRD50Q9ULJ7 1429 aa15.36■□□□□ 0.05
NDRG1-228ENST00000523931 E9PCH4 1651 aa15.35■□□□□ 0.05
NDRG1-228ENST00000523931 R3HDM1Q15032 1099 aaKnown RBP15.35■□□□□ 0.05
NDRG1-228ENST00000523931 NPHP3Q7Z494 1330 aa15.35■□□□□ 0.05
NDRG1-228ENST00000523931 KRT27Q7Z3Y8 459 aa15.34■□□□□ 0.05
NDRG1-228ENST00000523931 SLIT2O94813 1529 aa15.33■□□□□ 0.05
NDRG1-228ENST00000523931 ADGRL2O95490 1459 aa15.33■□□□□ 0.04
NDRG1-228ENST00000523931 IQGAP3Q86VI3 1631 aa15.32■□□□□ 0.04
NDRG1-228ENST00000523931 XPCQ01831 940 aaPredicted RBP15.32■□□□□ 0.04
NDRG1-228ENST00000523931 ZNF326Q5BKZ1 582 aaKnown RBP15.31■□□□□ 0.04
NDRG1-228ENST00000523931 CCDC9Q9Y3X0 531 aaKnown RBP15.31■□□□□ 0.04
NDRG1-228ENST00000523931 PXDNQ92626 1479 aa15.31■□□□□ 0.04
NDRG1-228ENST00000523931 A0A0G2JS52 829 aa15.3■□□□□ 0.04
NDRG1-228ENST00000523931 MYT1Q01538 1121 aa15.3■□□□□ 0.04
NDRG1-228ENST00000523931 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
NDRG1-228ENST00000523931 APLP2Q06481 763 aa15.29■□□□□ 0.04
NDRG1-228ENST00000523931 ESCO1Q5FWF5 840 aa15.29■□□□□ 0.04
NDRG1-228ENST00000523931 FOXO3O43524 673 aa15.28■□□□□ 0.04
NDRG1-228ENST00000523931 VPS72Q15906 364 aa15.28■□□□□ 0.04
NDRG1-228ENST00000523931 IFFO2Q5TF58 517 aa15.28■□□□□ 0.04
NDRG1-228ENST00000523931 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.04
NDRG1-228ENST00000523931 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.04
NDRG1-228ENST00000523931 USP32Q8NFA0 1604 aa15.26■□□□□ 0.03
NDRG1-228ENST00000523931 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
NDRG1-228ENST00000523931 RGPD1P0DJD0 1748 aa15.26■□□□□ 0.03
NDRG1-228ENST00000523931 LRPPRCP42704 1394 aaKnown RBP15.25■□□□□ 0.03
NDRG1-228ENST00000523931 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
NDRG1-228ENST00000523931 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
NDRG1-228ENST00000523931 HFM1A2PYH4 1435 aa15.22■□□□□ 0.03
NDRG1-228ENST00000523931 CDC42BPGQ6DT37 1551 aa15.22■□□□□ 0.03
NDRG1-228ENST00000523931 PLCH1Q4KWH8 1693 aa15.22■□□□□ 0.03
NDRG1-228ENST00000523931 NWD2Q9ULI1 1742 aa15.21■□□□□ 0.03
NDRG1-228ENST00000523931 DISP2A7MBM2 1401 aa15.21■□□□□ 0.03
NDRG1-228ENST00000523931 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
NDRG1-228ENST00000523931 FAM50AQ14320 339 aaKnown RBP15.2■□□□□ 0.02
NDRG1-228ENST00000523931 PPP1R1BQ9UD71 204 aaPredicted RBP15.2■□□□□ 0.02
NDRG1-228ENST00000523931 NEXMIFQ5QGS0 1516 aa15.2■□□□□ 0.02
NDRG1-228ENST00000523931 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
NDRG1-228ENST00000523931 EZH2Q15910 746 aaKnown RBP15.19■□□□□ 0.02
NDRG1-228ENST00000523931 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
NDRG1-228ENST00000523931 PRAG1Q86YV5 1406 aa15.18■□□□□ 0.02
NDRG1-228ENST00000523931 FAM182BQ5T319 152 aa15.18■□□□□ 0.02
NDRG1-228ENST00000523931 NUP155O75694 1391 aa15.18■□□□□ 0.02
NDRG1-228ENST00000523931 CCDC144AA2RUR9 1427 aa15.17■□□□□ 0.02
NDRG1-228ENST00000523931 TNS1Q9HBL0 1735 aaKnown RBP15.17■□□□□ 0.02
NDRG1-228ENST00000523931 ADGRB2O60241 1585 aa15.17■□□□□ 0.02
NDRG1-228ENST00000523931 NUTM2FA1L443 756 aa15.17■□□□□ 0.02
NDRG1-228ENST00000523931 CABLES1Q8TDN4 633 aa15.16■□□□□ 0.02
NDRG1-228ENST00000523931 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
NDRG1-228ENST00000523931 ZNF784Q8NCA9 323 aaPredicted RBP15.15■□□□□ 0.02
NDRG1-228ENST00000523931 CAMKK2Q96RR4 588 aa15.14■□□□□ 0.01
NDRG1-228ENST00000523931 NAIPQ13075 1403 aa15.14■□□□□ 0.01
NDRG1-228ENST00000523931 TNS3Q68CZ2 1445 aa15.13■□□□□ 0.01
NDRG1-228ENST00000523931 KRT28Q7Z3Y7 464 aa15.13■□□□□ 0.01
NDRG1-228ENST00000523931 SPON1Q9HCB6 807 aa15.13■□□□□ 0.01
NDRG1-228ENST00000523931 KIF1AQ12756 1690 aa15.12■□□□□ 0.01
NDRG1-228ENST00000523931 PARD3Q8TEW0 1356 aa15.12■□□□□ 0.01
NDRG1-228ENST00000523931 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
NDRG1-228ENST00000523931 CLTCL1P53675 1640 aa15.11■□□□□ 0.01
NDRG1-228ENST00000523931 FAM83GA6ND36 823 aa15.11■□□□□ 0.01
NDRG1-228ENST00000523931 LMOD2Q6P5Q4 547 aa15.11■□□□□ 0.01
NDRG1-228ENST00000523931 CAMTA1Q9Y6Y1 1673 aa15.11■□□□□ 0.01
NDRG1-228ENST00000523931 ABCA3Q99758 1704 aa15.11■□□□□ 0.01
NDRG1-228ENST00000523931 NRAPQ86VF7 1730 aa15.1■□□□□ 0.01
NDRG1-228ENST00000523931 TRIM37O94972 964 aa15.1■□□□□ 0.01
NDRG1-228ENST00000523931 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
NDRG1-228ENST00000523931 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
NDRG1-228ENST00000523931 KIF1BO60333 1816 aa15.1■□□□□ 0.01
NDRG1-228ENST00000523931 APBA3O96018 575 aa15.09■□□□□ 0.01
NDRG1-228ENST00000523931 C1QTNF8P60827 252 aa15.09■□□□□ 0.01
NDRG1-228ENST00000523931 PSME1Q06323 249 aa15.09■□□□□ 0.01
NDRG1-228ENST00000523931 BTG4Q9NY30 223 aa15.09■□□□□ 0.01
NDRG1-228ENST00000523931 KCNQ2O43526 872 aa15.08■□□□□ 0
NDRG1-228ENST00000523931 ARHGEF10O15013 1369 aa15.08■□□□□ 0
NDRG1-228ENST00000523931 NUP188Q5SRE5 1749 aa15.07■□□□□ 0
NDRG1-228ENST00000523931 FAM196AQ6ZSG2 479 aa15.07■□□□□ 0
NDRG1-228ENST00000523931 RREB1Q92766 1687 aa15.06■□□□□ 0
NDRG1-228ENST00000523931 THSD7AQ9UPZ6 1657 aa15.06■□□□□ 0
NDRG1-228ENST00000523931 FMN2Q9NZ56 1722 aa15.06■□□□□ 0
NDRG1-228ENST00000523931 SPATA31A5Q5VU36 1347 aa15.06■□□□□ 0
NDRG1-228ENST00000523931 SPATA31A7Q8IWB4 1347 aa15.06■□□□□ 0
NDRG1-228ENST00000523931 ROCK1Q13464 1354 aa15.06■□□□□ 0
NDRG1-228ENST00000523931 WAPLQ7Z5K2 1190 aa15.05■□□□□ -0
NDRG1-228ENST00000523931 SBNO1A3KN83 1393 aa15.04■□□□□ -0
NDRG1-228ENST00000523931 STK26Q9P289 416 aa15.04■□□□□ -0
NDRG1-228ENST00000523931 PHF8Q9UPP1 1060 aa15.04■□□□□ -0
NDRG1-228ENST00000523931 COL14A1Q05707 1796 aaKnown RBP15.03■□□□□ -0
NDRG1-228ENST00000523931 RPGRIP1LQ68CZ1 1315 aa15.01□□□□□ -0.01
NDRG1-228ENST00000523931 TECPR2O15040 1411 aa15□□□□□ -0.01
NDRG1-228ENST00000523931 PLEKHH1Q9ULM0 1364 aa15□□□□□ -0.01
NDRG1-228ENST00000523931 CEP350Q5VT06 3117 aa15□□□□□ -0.01
NDRG1-228ENST00000523931 CHD4Q14839 1912 aa15□□□□□ -0.01
NDRG1-228ENST00000523931 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
NDRG1-228ENST00000523931 RGPD8O14715 1765 aaPredicted RBP15□□□□□ -0.01
NDRG1-228ENST00000523931 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
NDRG1-228ENST00000523931 PPLO60437 1756 aa14.99□□□□□ -0.01
NDRG1-228ENST00000523931 NRKQ7Z2Y5 1582 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms