RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 IL27Q8NEV9 243 aa10.4□□□□□ -0.74
TNFRSF10B-208ENST00000523752 TMEM132EQ6IEE7 984 aa10.4□□□□□ -0.75
TNFRSF10B-208ENST00000523752 TNNQ9UQP3 1299 aa10.39□□□□□ -0.75
TNFRSF10B-208ENST00000523752 CENPJQ9HC77 1338 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF10B-208ENST00000523752 PPM1GO15355 546 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF10B-208ENST00000523752 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
TNFRSF10B-208ENST00000523752 POLR3AO14802 1390 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF10B-208ENST00000523752 CANXP27824 592 aaKnown RBP10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 USP35Q9P2H5 1018 aa10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 ASXL2Q76L83 1435 aa10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 PPLO60437 1756 aa10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 VIRMAQ69YN4 1812 aaKnown RBP10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 NFKBIBQ15653 356 aa10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 ADGRB1O14514 1584 aa10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 SBNO2Q9Y2G9 1366 aa10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 NPATQ14207 1427 aa10.38□□□□□ -0.75
TNFRSF10B-208ENST00000523752 NUTM2DQ5VT03 806 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF10B-208ENST00000523752 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
TNFRSF10B-208ENST00000523752 MORC1Q86VD1 984 aa10.37□□□□□ -0.75
TNFRSF10B-208ENST00000523752 FRAT1Q92837 279 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF10B-208ENST00000523752 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
TNFRSF10B-208ENST00000523752 FRMPD1Q5SYB0 1578 aa10.36□□□□□ -0.75
TNFRSF10B-208ENST00000523752 BCL2L13Q9BXK5 485 aa10.36□□□□□ -0.75
TNFRSF10B-208ENST00000523752 KDM4FA0A1W2PPD8 638 aa10.36□□□□□ -0.75
TNFRSF10B-208ENST00000523752 SEC24BO95487 1268 aa10.36□□□□□ -0.75
TNFRSF10B-208ENST00000523752 LMTK2Q8IWU2 1503 aa10.36□□□□□ -0.75
TNFRSF10B-208ENST00000523752 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
TNFRSF10B-208ENST00000523752 USP19O94966 1318 aa10.36□□□□□ -0.75
TNFRSF10B-208ENST00000523752 RLBP1P12271 317 aa10.36□□□□□ -0.75
TNFRSF10B-208ENST00000523752 TCP11L2Q8N4U5 519 aa10.35□□□□□ -0.75
TNFRSF10B-208ENST00000523752 CLUAP1Q96AJ1 413 aa10.35□□□□□ -0.75
TNFRSF10B-208ENST00000523752 FAM69CQ0P6D2 419 aa10.35□□□□□ -0.75
TNFRSF10B-208ENST00000523752 GGT6Q6P531 493 aa10.35□□□□□ -0.75
TNFRSF10B-208ENST00000523752 RTN4Q9NQC3 1192 aaKnown RBP10.35□□□□□ -0.75
TNFRSF10B-208ENST00000523752 EIF5BO60841 1220 aaKnown RBP10.35□□□□□ -0.75
TNFRSF10B-208ENST00000523752 MTHFSP49914 203 aa10.34□□□□□ -0.75
TNFRSF10B-208ENST00000523752 PDE3AQ14432 1141 aa10.34□□□□□ -0.75
TNFRSF10B-208ENST00000523752 C14orf93Q9H972 538 aaKnown RBP10.34□□□□□ -0.75
TNFRSF10B-208ENST00000523752 SIGLEC1Q9BZZ2 1709 aa10.34□□□□□ -0.75
TNFRSF10B-208ENST00000523752 CGNL1Q0VF96 1302 aa10.34□□□□□ -0.75
TNFRSF10B-208ENST00000523752 RARSP54136 660 aaKnown RBP10.34□□□□□ -0.75
TNFRSF10B-208ENST00000523752 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
TNFRSF10B-208ENST00000523752 TULP4Q9NRJ4 1543 aa10.33□□□□□ -0.76
TNFRSF10B-208ENST00000523752 GLI2P10070 1586 aa10.33□□□□□ -0.76
TNFRSF10B-208ENST00000523752 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF10B-208ENST00000523752 PCDHB15Q9Y5E8 787 aa10.33□□□□□ -0.76
TNFRSF10B-208ENST00000523752 FRAT2O75474 233 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF10B-208ENST00000523752 USP32Q8NFA0 1604 aa10.32□□□□□ -0.76
TNFRSF10B-208ENST00000523752 ARHGEF28Q8N1W1 1705 aaKnown RBP10.32□□□□□ -0.76
TNFRSF10B-208ENST00000523752 NLRP1Q9C000 1473 aa10.32□□□□□ -0.76
TNFRSF10B-208ENST00000523752 HECW2Q9P2P5 1572 aa10.32□□□□□ -0.76
TNFRSF10B-208ENST00000523752 SAFB2Q14151 953 aaKnown RBP eCLIP10.32□□□□□ -0.76
TNFRSF10B-208ENST00000523752 GSE1Q14687 1217 aa10.31□□□□□ -0.76
TNFRSF10B-208ENST00000523752 NGEFQ8N5V2 710 aa10.31□□□□□ -0.76
TNFRSF10B-208ENST00000523752 POGZQ7Z3K3 1410 aa10.31□□□□□ -0.76
TNFRSF10B-208ENST00000523752 ABCC3O15438 1527 aa10.3□□□□□ -0.76
TNFRSF10B-208ENST00000523752 CABP2Q9NPB3 220 aa10.3□□□□□ -0.76
TNFRSF10B-208ENST00000523752 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
TNFRSF10B-208ENST00000523752 NINLQ9Y2I6 1382 aa10.3□□□□□ -0.76
TNFRSF10B-208ENST00000523752 NPM1P06748 294 aaKnown RBP eCLIP10.3□□□□□ -0.76
TNFRSF10B-208ENST00000523752 CAMSAP1Q5T5Y3 1602 aa10.3□□□□□ -0.76
TNFRSF10B-208ENST00000523752 TSR2Q969E8 191 aaKnown RBP10.29□□□□□ -0.76
TNFRSF10B-208ENST00000523752 NEXMIFQ5QGS0 1516 aa10.28□□□□□ -0.76
TNFRSF10B-208ENST00000523752 U2AF1L5P0DN76 240 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF10B-208ENST00000523752 U2AF1Q01081 240 aaKnown RBP eCLIP10.28□□□□□ -0.766e-10■■■□□ 18.3
TNFRSF10B-208ENST00000523752 DIP2BQ9P265 1576 aa10.28□□□□□ -0.76
TNFRSF10B-208ENST00000523752 MAPK8IP3Q9UPT6 1336 aa10.28□□□□□ -0.76
TNFRSF10B-208ENST00000523752 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
TNFRSF10B-208ENST00000523752 ANKRD36BQ8N2N9 1353 aa10.28□□□□□ -0.76
TNFRSF10B-208ENST00000523752 ADGRB2O60241 1585 aa10.27□□□□□ -0.76
TNFRSF10B-208ENST00000523752 CD109Q6YHK3 1445 aa10.27□□□□□ -0.77
TNFRSF10B-208ENST00000523752 PIK3C2BO00750 1634 aa10.27□□□□□ -0.77
TNFRSF10B-208ENST00000523752 RAPGEF3O95398 923 aa10.27□□□□□ -0.77
TNFRSF10B-208ENST00000523752 PDZRN3Q9UPQ7 1066 aa10.27□□□□□ -0.77
TNFRSF10B-208ENST00000523752 MLH3Q9UHC1 1453 aa10.27□□□□□ -0.77
TNFRSF10B-208ENST00000523752 A0A1W2PP64 1363 aa10.27□□□□□ -0.77
TNFRSF10B-208ENST00000523752 MYO5BQ9ULV0 1848 aa10.26□□□□□ -0.77
TNFRSF10B-208ENST00000523752 EVC2Q86UK5 1308 aa10.26□□□□□ -0.77
TNFRSF10B-208ENST00000523752 STK26Q9P289 416 aa10.26□□□□□ -0.77
TNFRSF10B-208ENST00000523752 CCDC27Q2M243 656 aa10.26□□□□□ -0.77
TNFRSF10B-208ENST00000523752 CFAP53Q96M91 514 aa10.26□□□□□ -0.77
TNFRSF10B-208ENST00000523752 GGNBP2Q9H3C7 697 aa10.26□□□□□ -0.77
TNFRSF10B-208ENST00000523752 SLKQ9H2G2 1235 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF10B-208ENST00000523752 PMFBP1Q8TBY8 1022 aa10.25□□□□□ -0.77
TNFRSF10B-208ENST00000523752 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
TNFRSF10B-208ENST00000523752 U2SURPO15042 1029 aaKnown RBP10.24□□□□□ -0.77
TNFRSF10B-208ENST00000523752 COL3A1P02461 1466 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF10B-208ENST00000523752 MVPQ14764 893 aaKnown RBP10.24□□□□□ -0.77
TNFRSF10B-208ENST00000523752 ARXQ96QS3 562 aa10.24□□□□□ -0.77
TNFRSF10B-208ENST00000523752 PLEKHF1Q96S99 279 aa10.24□□□□□ -0.77
TNFRSF10B-208ENST00000523752 EXOSC9Q06265 439 aaKnown RBP10.23□□□□□ -0.77
TNFRSF10B-208ENST00000523752 CFAP74Q9C0B2 1584 aa10.23□□□□□ -0.77
TNFRSF10B-208ENST00000523752 IDI1Q13907 227 aa10.23□□□□□ -0.77
TNFRSF10B-208ENST00000523752 MYH16Q9H6N6 1097 aa10.23□□□□□ -0.77
TNFRSF10B-208ENST00000523752 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
TNFRSF10B-208ENST00000523752 ABCC11Q96J66 1382 aa10.23□□□□□ -0.77
TNFRSF10B-208ENST00000523752 NSD2O96028 1365 aa10.23□□□□□ -0.77
TNFRSF10B-208ENST00000523752 DIP2CQ9Y2E4 1556 aa10.23□□□□□ -0.77
TNFRSF10B-208ENST00000523752 SRPK2P78362 688 aaKnown RBP10.22□□□□□ -0.77
TNFRSF10B-208ENST00000523752 ANO8Q9HCE9 1232 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 784.2 ms