RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
CTNNA1-239ENST00000523685 ZBED2Q9BTP6 218 aa8.78□□□□□ -1
CTNNA1-239ENST00000523685 KIF21BO75037 1637 aa8.78□□□□□ -1
CTNNA1-239ENST00000523685 NBPF26B4DH59 902 aa8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 GIGYF2Q6Y7W6 1299 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 NUDT18Q6ZVK8 323 aa8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 TATDN2Q93075 761 aa8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 HS3ST6Q96QI5 342 aa8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 EYA1Q99502 592 aa8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 TMUB1Q9BVT8 246 aa8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 AXIN2Q9Y2T1 843 aa8.77□□□□□ -1.01
CTNNA1-239ENST00000523685 ARAP3Q8WWN8 1544 aa8.76□□□□□ -1.01
CTNNA1-239ENST00000523685 LCE2DQ5TA82 110 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-239ENST00000523685 SLC4A5Q9BY07 1137 aa8.76□□□□□ -1.01
CTNNA1-239ENST00000523685 FAM117AQ9C073 453 aa8.76□□□□□ -1.01
CTNNA1-239ENST00000523685 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
CTNNA1-239ENST00000523685 C3orf80F5H4A9 247 aa8.75□□□□□ -1.01
CTNNA1-239ENST00000523685 DMRTA1Q5VZB9 504 aa8.75□□□□□ -1.01
CTNNA1-239ENST00000523685 NLRP7Q8WX94 980 aa8.75□□□□□ -1.01
CTNNA1-239ENST00000523685 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
CTNNA1-239ENST00000523685 KIAA1468Q9P260 1216 aa8.75□□□□□ -1.01
CTNNA1-239ENST00000523685 FHOD3Q2V2M9 1422 aa8.74□□□□□ -1.01
CTNNA1-239ENST00000523685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-239ENST00000523685 POTEB3A0JP26 581 aa8.74□□□□□ -1.01
CTNNA1-239ENST00000523685 RCCD1A6NED2 376 aa8.74□□□□□ -1.01
CTNNA1-239ENST00000523685 POTEBQ6S5H4 581 aa8.74□□□□□ -1.01
CTNNA1-239ENST00000523685 PHLDB1Q86UU1 1377 aa8.73□□□□□ -1.01
CTNNA1-239ENST00000523685 PTPRMP28827 1452 aa8.73□□□□□ -1.01
CTNNA1-239ENST00000523685 PLEKHD1A6NEE1 506 aa8.73□□□□□ -1.01
CTNNA1-239ENST00000523685 MS4A1P11836 297 aa8.73□□□□□ -1.01
CTNNA1-239ENST00000523685 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-239ENST00000523685 RABGEF1Q9UJ41 708 aa8.73□□□□□ -1.01
CTNNA1-239ENST00000523685 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
CTNNA1-239ENST00000523685 RAPGEF6Q8TEU7 1601 aa8.72□□□□□ -1.01
CTNNA1-239ENST00000523685 SMAPO00193 183 aa8.72□□□□□ -1.01
CTNNA1-239ENST00000523685 DNAJB2P25686 324 aa8.72□□□□□ -1.01
CTNNA1-239ENST00000523685 SAMD9Q5K651 1589 aa8.72□□□□□ -1.01
CTNNA1-239ENST00000523685 NUP153P49790 1475 aaKnown RBP8.71□□□□□ -1.01
CTNNA1-239ENST00000523685 NEO1Q92859 1461 aa8.71□□□□□ -1.01
CTNNA1-239ENST00000523685 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-239ENST00000523685 ATP1B4Q9UN42 357 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-239ENST00000523685 VPS9D1Q9Y2B5 631 aa8.71□□□□□ -1.02
CTNNA1-239ENST00000523685 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
CTNNA1-239ENST00000523685 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
CTNNA1-239ENST00000523685 MLECQ14165 292 aa8.7□□□□□ -1.02
CTNNA1-239ENST00000523685 FBXO41Q8TF61 875 aa8.7□□□□□ -1.02
CTNNA1-239ENST00000523685 DENND4BO75064 1496 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-239ENST00000523685 FRMPD1Q5SYB0 1578 aa8.69□□□□□ -1.02
CTNNA1-239ENST00000523685 ADAMTSL3P82987 1691 aa8.69□□□□□ -1.02
CTNNA1-239ENST00000523685 TK2O00142 265 aa8.68□□□□□ -1.02
CTNNA1-239ENST00000523685 HSPA2P54652 639 aa8.68□□□□□ -1.02
CTNNA1-239ENST00000523685 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
CTNNA1-239ENST00000523685 AKNAQ7Z591 1439 aa8.68□□□□□ -1.02
CTNNA1-239ENST00000523685 MADDQ8WXG6 1647 aa8.68□□□□□ -1.02
CTNNA1-239ENST00000523685 FANCAO15360 1455 aa8.67□□□□□ -1.02
CTNNA1-239ENST00000523685 BEGAINQ9BUH8 593 aa8.67□□□□□ -1.02
CTNNA1-239ENST00000523685 SEPT9Q9UHD8 586 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-239ENST00000523685 BCORL1Q5H9F3 1711 aa8.66□□□□□ -1.02
CTNNA1-239ENST00000523685 EEA1Q15075 1411 aa8.66□□□□□ -1.02
CTNNA1-239ENST00000523685 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTNNA1-239ENST00000523685 SULF1Q8IWU6 871 aa8.66□□□□□ -1.02
CTNNA1-239ENST00000523685 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-239ENST00000523685 YEATS2Q9ULM3 1422 aa8.65□□□□□ -1.02
CTNNA1-239ENST00000523685 BHMG1C9JSJ3 638 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-239ENST00000523685 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-239ENST00000523685 HDGFP51858 240 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-239ENST00000523685 FAM98CQ17RN3 349 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-239ENST00000523685 NBPF3Q9H094 633 aa8.65□□□□□ -1.02
CTNNA1-239ENST00000523685 RIMS1Q86UR5 1692 aaKnown RBP8.65□□□□□ -1.03
CTNNA1-239ENST00000523685 CDK13Q14004 1512 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 ARHGEF40Q8TER5 1519 aa8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 LMTK3Q96Q04 1460 aa8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 POGZQ7Z3K3 1410 aa8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 DDX11L8A8MPP1 907 aa8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 LAPTM4BQ86VI4 370 aa8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 GOPCQ9HD26 462 aa8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 TTC37Q6PGP7 1564 aa8.64□□□□□ -1.03
CTNNA1-239ENST00000523685 ADGRD1Q6QNK2 874 aa8.63□□□□□ -1.03
CTNNA1-239ENST00000523685 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
CTNNA1-239ENST00000523685 MYT1LQ9UL68 1186 aa8.63□□□□□ -1.03
CTNNA1-239ENST00000523685 ZFYVE16Q7Z3T8 1539 aa8.63□□□□□ -1.03
CTNNA1-239ENST00000523685 SCAPERQ9BY12 1400 aa8.63□□□□□ -1.03
CTNNA1-239ENST00000523685 CD46P15529 392 aa8.62□□□□□ -1.03
CTNNA1-239ENST00000523685 SWT1Q5T5J6 900 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-239ENST00000523685 RSPH4AQ5TD94 716 aa8.62□□□□□ -1.03
CTNNA1-239ENST00000523685 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
CTNNA1-239ENST00000523685 EFCAB5A4FU69 1503 aa8.62□□□□□ -1.03
CTNNA1-239ENST00000523685 RICTORQ6R327 1708 aa8.62□□□□□ -1.03
CTNNA1-239ENST00000523685 CFAP74Q9C0B2 1584 aa8.61□□□□□ -1.03
CTNNA1-239ENST00000523685 EFCAB2Q5VUJ9 269 aa8.61□□□□□ -1.03
CTNNA1-239ENST00000523685 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-239ENST00000523685 SLC4A3P48751 1232 aa8.6□□□□□ -1.03
CTNNA1-239ENST00000523685 CEBPAP49715 358 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-239ENST00000523685 DIXDC1Q155Q3 683 aa8.6□□□□□ -1.03
CTNNA1-239ENST00000523685 SH3D19Q5HYK7 790 aa8.6□□□□□ -1.03
CTNNA1-239ENST00000523685 RDH13Q8NBN7 331 aa8.6□□□□□ -1.03
CTNNA1-239ENST00000523685 STAC3Q96MF2 364 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms