RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 POTEAQ6S8J7 498 aa18.24■□□□□ 0.51
VEGFA-223ENST00000523125 WAPLQ7Z5K2 1190 aa18.24■□□□□ 0.51
VEGFA-223ENST00000523125 ORAI2Q96SN7 254 aa18.23■□□□□ 0.51
VEGFA-223ENST00000523125 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
VEGFA-223ENST00000523125 CFAP70Q5T0N1 1121 aa18.22■□□□□ 0.51
VEGFA-223ENST00000523125 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
VEGFA-223ENST00000523125 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-223ENST00000523125 LRRC59Q96AG4 307 aaKnown RBP18.2■□□□□ 0.5
VEGFA-223ENST00000523125 SIRT1Q96EB6 747 aa18.19■□□□□ 0.5
VEGFA-223ENST00000523125 SOS2Q07890 1332 aaPredicted RBP18.18■□□□□ 0.5
VEGFA-223ENST00000523125 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
VEGFA-223ENST00000523125 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
VEGFA-223ENST00000523125 ADGRB1O14514 1584 aa18.17■□□□□ 0.5
VEGFA-223ENST00000523125 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-223ENST00000523125 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-223ENST00000523125 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-223ENST00000523125 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
VEGFA-223ENST00000523125 DLC1Q96QB1 1528 aa18.14■□□□□ 0.49
VEGFA-223ENST00000523125 ESCO1Q5FWF5 840 aa18.14■□□□□ 0.49
VEGFA-223ENST00000523125 MEX3CQ5U5Q3 659 aaKnown RBP18.14■□□□□ 0.49
VEGFA-223ENST00000523125 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
VEGFA-223ENST00000523125 NUTM2FA1L443 756 aa18.13■□□□□ 0.49
VEGFA-223ENST00000523125 PXDNQ92626 1479 aa18.13■□□□□ 0.49
VEGFA-223ENST00000523125 COL22A1Q8NFW1 1626 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-223ENST00000523125 STAC3Q96MF2 364 aa18.12■□□□□ 0.49
VEGFA-223ENST00000523125 PRAM1Q96QH2 718 aa18.11■□□□□ 0.49
VEGFA-223ENST00000523125 KIF1AQ12756 1690 aa18.11■□□□□ 0.49
VEGFA-223ENST00000523125 NPHP3Q7Z494 1330 aa18.1■□□□□ 0.49
VEGFA-223ENST00000523125 FOXO3O43524 673 aa18.09■□□□□ 0.49
VEGFA-223ENST00000523125 ZNF772Q68DY9 489 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-223ENST00000523125 USP32Q8NFA0 1604 aa18.09■□□□□ 0.49
VEGFA-223ENST00000523125 ADGRB2O60241 1585 aa18.08■□□□□ 0.49
VEGFA-223ENST00000523125 SAFB2Q14151 953 aaKnown RBP eCLIP18.08■□□□□ 0.48
VEGFA-223ENST00000523125 ARHGEF28Q8N1W1 1705 aaKnown RBP18.08■□□□□ 0.48
VEGFA-223ENST00000523125 MARF1Q9Y4F3 1742 aaKnown RBP18.08■□□□□ 0.48
VEGFA-223ENST00000523125 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
VEGFA-223ENST00000523125 AFF2P51816 1311 aa18.07■□□□□ 0.48
VEGFA-223ENST00000523125 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
VEGFA-223ENST00000523125 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-223ENST00000523125 POGKQ9P215 609 aa18.05■□□□□ 0.48
VEGFA-223ENST00000523125 C8orf37Q96NL8 207 aa18.04■□□□□ 0.48
VEGFA-223ENST00000523125 ADAMTS2O95450 1211 aa18.03■□□□□ 0.48
VEGFA-223ENST00000523125 PHF8Q9UPP1 1060 aa18.02■□□□□ 0.48
VEGFA-223ENST00000523125 ANKARQ7Z5J8 1434 aa18.01■□□□□ 0.47
VEGFA-223ENST00000523125 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
VEGFA-223ENST00000523125 SPATA31A3Q5VYP0 1347 aa18■□□□□ 0.47
VEGFA-223ENST00000523125 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
VEGFA-223ENST00000523125 NGLY1Q96IV0 654 aa18■□□□□ 0.47
VEGFA-223ENST00000523125 MINK1Q8N4C8 1332 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-223ENST00000523125 RXRBP28702 533 aa17.99■□□□□ 0.47
VEGFA-223ENST00000523125 QTRT2Q9H974 415 aaKnown RBP17.98■□□□□ 0.47
VEGFA-223ENST00000523125 CDK12Q9NYV4 1490 aaPredicted RBP17.98■□□□□ 0.47
VEGFA-223ENST00000523125 TRPM3Q9HCF6 1732 aaPredicted RBP17.98■□□□□ 0.47
VEGFA-223ENST00000523125 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
VEGFA-223ENST00000523125 PRR36Q9H6K5 1346 aa17.98■□□□□ 0.47
VEGFA-223ENST00000523125 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
VEGFA-223ENST00000523125 ABCA3Q99758 1704 aa17.97■□□□□ 0.47
VEGFA-223ENST00000523125 WASLO00401 505 aaPredicted RBP17.96■□□□□ 0.47
VEGFA-223ENST00000523125 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
VEGFA-223ENST00000523125 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
VEGFA-223ENST00000523125 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
VEGFA-223ENST00000523125 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
VEGFA-223ENST00000523125 TNS3Q68CZ2 1445 aa17.95■□□□□ 0.46
VEGFA-223ENST00000523125 SBNO1A3KN83 1393 aa17.94■□□□□ 0.46
VEGFA-223ENST00000523125 ALS2Q96Q42 1657 aa17.94■□□□□ 0.46
VEGFA-223ENST00000523125 USP21Q9UK80 565 aa17.94■□□□□ 0.46
VEGFA-223ENST00000523125 EIF3AQ14152 1382 aaKnown RBP17.93■□□□□ 0.46
VEGFA-223ENST00000523125 RBM6P78332 1123 aaKnown RBP17.93■□□□□ 0.46
VEGFA-223ENST00000523125 PSME1Q06323 249 aa17.93■□□□□ 0.46
VEGFA-223ENST00000523125 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
VEGFA-223ENST00000523125 BCL9LQ86UU0 1499 aa17.93■□□□□ 0.46
VEGFA-223ENST00000523125 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
VEGFA-223ENST00000523125 RGS12O14924 1447 aa17.92■□□□□ 0.46
VEGFA-223ENST00000523125 TRPM1Q7Z4N2 1603 aa17.91■□□□□ 0.46
VEGFA-223ENST00000523125 ATRNO75882 1429 aa17.91■□□□□ 0.46
VEGFA-223ENST00000523125 TOPAZ1Q8N9V7 1692 aa17.91■□□□□ 0.46
VEGFA-223ENST00000523125 ATP7BP35670 1465 aa17.91■□□□□ 0.46
VEGFA-223ENST00000523125 CABLES1Q8TDN4 633 aa17.89■□□□□ 0.45
VEGFA-223ENST00000523125 TRPC5Q9UL62 973 aaPredicted RBP17.89■□□□□ 0.45
VEGFA-223ENST00000523125 QRICH2Q9H0J4 1663 aa17.89■□□□□ 0.45
VEGFA-223ENST00000523125 CRYBG1Q9Y4K1 1723 aa17.89■□□□□ 0.45
VEGFA-223ENST00000523125 SLIT2O94813 1529 aa17.88■□□□□ 0.45
VEGFA-223ENST00000523125 PLCH1Q4KWH8 1693 aa17.88■□□□□ 0.45
VEGFA-223ENST00000523125 NUDT16Q96DE0 195 aaKnown RBP17.88■□□□□ 0.45
VEGFA-223ENST00000523125 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
VEGFA-223ENST00000523125 ARHGEF10O15013 1369 aa17.88■□□□□ 0.45
VEGFA-223ENST00000523125 NEUROD1Q13562 356 aa17.87■□□□□ 0.45
VEGFA-223ENST00000523125 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
VEGFA-223ENST00000523125 NWD2Q9ULI1 1742 aa17.86■□□□□ 0.45
VEGFA-223ENST00000523125 LMOD2Q6P5Q4 547 aa17.86■□□□□ 0.45
VEGFA-223ENST00000523125 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
VEGFA-223ENST00000523125 EP400Q96L91 3159 aa17.85■□□□□ 0.45
VEGFA-223ENST00000523125 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
VEGFA-223ENST00000523125 NGDNQ8NEJ9 315 aaKnown RBP17.84■□□□□ 0.45
VEGFA-223ENST00000523125 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-223ENST00000523125 UNC5CLQ8IV45 518 aa17.83■□□□□ 0.44
VEGFA-223ENST00000523125 GLI3P10071 1580 aa17.83■□□□□ 0.44
VEGFA-223ENST00000523125 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
VEGFA-223ENST00000523125 NRAPQ86VF7 1730 aa17.81■□□□□ 0.44
VEGFA-223ENST00000523125 POLR3AO14802 1390 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms