RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RBM33Q96EV2 1170 aaKnown RBP5.93□□□□□ -1.46
SKP1-209ENST00000522552 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
SKP1-209ENST00000522552 NPDC1Q9NQX5 325 aaPredicted RBP5.93□□□□□ -1.46
SKP1-209ENST00000522552 CADPSQ9ULU8 1353 aa5.93□□□□□ -1.46
SKP1-209ENST00000522552 PSDA5PKW4 1024 aaPredicted RBP5.92□□□□□ -1.46
SKP1-209ENST00000522552 PSEN2P49810 448 aa5.92□□□□□ -1.46
SKP1-209ENST00000522552 DIXDC1Q155Q3 683 aa5.92□□□□□ -1.46
SKP1-209ENST00000522552 TSR1Q2NL82 804 aaKnown RBP5.92□□□□□ -1.46
SKP1-209ENST00000522552 POTEEQ6S8J3 1075 aa5.92□□□□□ -1.46
SKP1-209ENST00000522552 CDHR5Q9HBB8 845 aa5.92□□□□□ -1.46
SKP1-209ENST00000522552 NCLP19338 710 aaKnown RBP5.91□□□□□ -1.46
SKP1-209ENST00000522552 RIC3Q7Z5B4 369 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 ANKRD13AQ8IZ07 590 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 GIPC2Q8TF65 315 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 ZDHHC16Q969W1 377 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 UCN2Q96RP3 112 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 KCNK17Q96T54 332 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 ADAM33Q9BZ11 813 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 TFIP11Q9UBB9 837 aaKnown RBP5.91□□□□□ -1.46
SKP1-209ENST00000522552 AP1G2O75843 785 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 WASHC4Q2M389 1173 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 UBXN4Q92575 508 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 NDUFB9Q9Y6M9 179 aa5.91□□□□□ -1.46
SKP1-209ENST00000522552 PHF14O94880 888 aa5.9□□□□□ -1.47
SKP1-209ENST00000522552 ZC3H6P61129 1189 aaKnown RBP5.9□□□□□ -1.47
SKP1-209ENST00000522552 METTL3Q86U44 580 aaKnown RBP5.9□□□□□ -1.47
SKP1-209ENST00000522552 GJD4Q96KN9 370 aaPredicted RBP5.9□□□□□ -1.47
SKP1-209ENST00000522552 ALG2Q9H553 416 aa5.9□□□□□ -1.47
SKP1-209ENST00000522552 PPP1R1BQ9UD71 204 aaPredicted RBP5.9□□□□□ -1.47
SKP1-209ENST00000522552 GPR37L1O60883 481 aa5.89□□□□□ -1.47
SKP1-209ENST00000522552 USP17L8P0C7I0 530 aa5.89□□□□□ -1.47
SKP1-209ENST00000522552 VAC14Q08AM6 782 aa5.89□□□□□ -1.47
SKP1-209ENST00000522552 TUSC1Q2TAM9 212 aa5.89□□□□□ -1.47
SKP1-209ENST00000522552 FAM161AQ3B820 660 aa5.89□□□□□ -1.47
SKP1-209ENST00000522552 PHLDB3Q6NSJ2 640 aa5.89□□□□□ -1.47
SKP1-209ENST00000522552 TYW1BQ6NUM6 668 aa5.89□□□□□ -1.47
SKP1-209ENST00000522552 ANKRD13DQ6ZTN6 518 aa5.89□□□□□ -1.47
SKP1-209ENST00000522552 MAP3K7O43318 606 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 QPCTQ16769 361 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 DMRTA1Q5VZB9 504 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 ARID4BQ4LE39 1312 aaPredicted RBP5.88□□□□□ -1.47
SKP1-209ENST00000522552 ANKRD62A6NC57 917 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 ARHGAP33O14559 1287 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 CSPP1Q1MSJ5 1256 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 CERS3Q8IU89 383 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 FAM9AQ8IZU1 332 aaPredicted RBP5.88□□□□□ -1.47
SKP1-209ENST00000522552 SPIRE2Q8WWL2 714 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 BCL2L12Q9HB09 334 aa5.88□□□□□ -1.47
SKP1-209ENST00000522552 MAFBQ9Y5Q3 323 aaPredicted RBP5.88□□□□□ -1.47
SKP1-209ENST00000522552 SPTLC1O15269 473 aa5.87□□□□□ -1.47
SKP1-209ENST00000522552 PTPREP23469 700 aa5.87□□□□□ -1.47
SKP1-209ENST00000522552 VAMP1P23763 118 aa5.87□□□□□ -1.47
SKP1-209ENST00000522552 LSM11P83369 360 aaKnown RBP eCLIP5.87□□□□□ -1.47
SKP1-209ENST00000522552 NAALADL2Q58DX5 795 aa5.87□□□□□ -1.47
SKP1-209ENST00000522552 EPAS1Q99814 870 aa5.87□□□□□ -1.47
SKP1-209ENST00000522552 COL9A1P20849 921 aa5.86□□□□□ -1.47
SKP1-209ENST00000522552 PBX2P40425 430 aa5.86□□□□□ -1.47
SKP1-209ENST00000522552 EN1Q05925 392 aaPredicted RBP5.86□□□□□ -1.47
SKP1-209ENST00000522552 SF3A1Q15459 793 aaKnown RBP5.86□□□□□ -1.47
SKP1-209ENST00000522552 TMEM164Q5U3C3 297 aa5.86□□□□□ -1.47
SKP1-209ENST00000522552 RSBN1LQ6PCB5 846 aaPredicted RBP5.86□□□□□ -1.47
SKP1-209ENST00000522552 KCNH8Q96L42 1107 aa5.86□□□□□ -1.47
SKP1-209ENST00000522552 HIRIP3Q9BW71 556 aaPredicted RBP5.86□□□□□ -1.47
SKP1-209ENST00000522552 ZC3H4Q9UPT8 1303 aaKnown RBP5.86□□□□□ -1.47
SKP1-209ENST00000522552 SOWAHDA6NJG2 315 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 LILRB3O75022 631 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 KDM4AO75164 1064 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 OATP04181 439 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 MARSP56192 900 aaKnown RBP5.85□□□□□ -1.47
SKP1-209ENST00000522552 RTL5Q5HYW3 569 aaPredicted RBP5.85□□□□□ -1.47
SKP1-209ENST00000522552 C6orf132Q5T0Z8 1188 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 GIMAP6Q6P9H5 292 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 NPAS4Q8IUM7 802 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 PRR7Q8TB68 274 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 ZMIZ1Q9ULJ6 1067 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 RECKO95980 971 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 ARID4AP29374 1257 aaPredicted RBP5.85□□□□□ -1.47
SKP1-209ENST00000522552 PXYLP1Q8TE99 480 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 STK32AQ8WU08 396 aa5.85□□□□□ -1.47
SKP1-209ENST00000522552 ANKRD33BA6NCL7 494 aa5.84□□□□□ -1.47
SKP1-209ENST00000522552 ELOAQ14241 798 aaKnown RBP5.84□□□□□ -1.47
SKP1-209ENST00000522552 PROX2Q3B8N5 592 aa5.84□□□□□ -1.47
SKP1-209ENST00000522552 ZNF326Q5BKZ1 582 aaKnown RBP5.84□□□□□ -1.47
SKP1-209ENST00000522552 TBC1D9Q6ZT07 1266 aa5.84□□□□□ -1.47
SKP1-209ENST00000522552 UBE2Q2Q8WVN8 375 aa5.84□□□□□ -1.47
SKP1-209ENST00000522552 TRIM34Q9BYJ4 488 aa5.83□□□□□ -1.48
SKP1-209ENST00000522552 HMX1Q9NP08 348 aaPredicted RBP5.83□□□□□ -1.48
SKP1-209ENST00000522552 PCDHB15Q9Y5E8 787 aa5.83□□□□□ -1.48
SKP1-209ENST00000522552 MOXD2PA6NHM9 499 aa5.82□□□□□ -1.48
SKP1-209ENST00000522552 SSFA2P28290 1259 aa5.82□□□□□ -1.48
SKP1-209ENST00000522552 ADGRD1Q6QNK2 874 aa5.82□□□□□ -1.48
SKP1-209ENST00000522552 ADGRG1Q9Y653 693 aa5.82□□□□□ -1.48
SKP1-209ENST00000522552 PPP1R3GB7ZBB8 358 aa5.82□□□□□ -1.48
SKP1-209ENST00000522552 SERPINB4P48594 390 aa5.82□□□□□ -1.48
SKP1-209ENST00000522552 KANK4Q5T7N3 995 aaPredicted RBP5.82□□□□□ -1.48
SKP1-209ENST00000522552 ZNF662Q6ZS27 426 aa5.82□□□□□ -1.48
SKP1-209ENST00000522552 ZBED2Q9BTP6 218 aa5.82□□□□□ -1.48
SKP1-209ENST00000522552 SOX11P35716 441 aa5.81□□□□□ -1.48
SKP1-209ENST00000522552 DPH6Q7L8W6 267 aa5.81□□□□□ -1.48
SKP1-209ENST00000522552 CABLES1Q8TDN4 633 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms