RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 SAFB2Q14151 953 aaKnown RBP eCLIP14.62□□□□□ -0.07
CD74-208ENST00000522246 CHD2O14647 1828 aaKnown RBP14.62□□□□□ -0.07
CD74-208ENST00000522246 MINK1Q8N4C8 1332 aaPredicted RBP14.61□□□□□ -0.07
CD74-208ENST00000522246 ROBO2Q9HCK4 1378 aa14.6□□□□□ -0.07
CD74-208ENST00000522246 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
CD74-208ENST00000522246 SRPK2P78362 688 aaKnown RBP14.59□□□□□ -0.07
CD74-208ENST00000522246 CDK19Q9BWU1 502 aa14.59□□□□□ -0.07
CD74-208ENST00000522246 ATAD2Q6PL18 1390 aa14.59□□□□□ -0.07
CD74-208ENST00000522246 PLEKHH1Q9ULM0 1364 aa14.58□□□□□ -0.08
CD74-208ENST00000522246 NINLQ9Y2I6 1382 aa14.58□□□□□ -0.08
CD74-208ENST00000522246 XRN1Q8IZH2 1706 aaKnown RBP14.58□□□□□ -0.08
CD74-208ENST00000522246 ANP32CO43423 234 aa14.57□□□□□ -0.08
CD74-208ENST00000522246 STRCQ7RTU9 1775 aa14.56□□□□□ -0.08
CD74-208ENST00000522246 PROSER2Q86WR7 435 aaPredicted RBP14.55□□□□□ -0.08
CD74-208ENST00000522246 TMC1Q8TDI8 760 aa14.55□□□□□ -0.08
CD74-208ENST00000522246 PANK3Q9H999 370 aa14.55□□□□□ -0.08
CD74-208ENST00000522246 CABP2Q9NPB3 220 aa14.55□□□□□ -0.08
CD74-208ENST00000522246 NCOA3Q9Y6Q9 1424 aa14.54□□□□□ -0.08
CD74-208ENST00000522246 TULP4Q9NRJ4 1543 aa14.54□□□□□ -0.08
CD74-208ENST00000522246 NWD1Q149M9 1564 aa14.53□□□□□ -0.08
CD74-208ENST00000522246 NKTRP30414 1462 aaKnown RBP14.53□□□□□ -0.08
CD74-208ENST00000522246 TERF2IPQ9NYB0 399 aa14.53□□□□□ -0.08
CD74-208ENST00000522246 KNSTRNQ9Y448 316 aa14.53□□□□□ -0.08
CD74-208ENST00000522246 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
CD74-208ENST00000522246 ADGRB2O60241 1585 aa14.52□□□□□ -0.08
CD74-208ENST00000522246 NUDT16Q96DE0 195 aaKnown RBP14.52□□□□□ -0.09
CD74-208ENST00000522246 PER1O15534 1290 aaPredicted RBP14.51□□□□□ -0.09
CD74-208ENST00000522246 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
CD74-208ENST00000522246 SLC12A5Q9H2X9 1139 aa14.51□□□□□ -0.09
CD74-208ENST00000522246 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.51□□□□□ -0.09
CD74-208ENST00000522246 KTN1Q86UP2 1357 aaKnown RBP14.5□□□□□ -0.09
CD74-208ENST00000522246 HDGFL2Q7Z4V5 671 aaPredicted RBP14.5□□□□□ -0.09
CD74-208ENST00000522246 C14orf37Q86TY3 774 aa14.5□□□□□ -0.09
CD74-208ENST00000522246 C19orf44Q9H6X5 657 aa14.5□□□□□ -0.09
CD74-208ENST00000522246 MIER1Q8N108 512 aa14.49□□□□□ -0.09
CD74-208ENST00000522246 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
CD74-208ENST00000522246 RALBP1Q15311 655 aa14.48□□□□□ -0.09
CD74-208ENST00000522246 CABP1Q9NZU7 370 aa14.48□□□□□ -0.09
CD74-208ENST00000522246 ADGRL3Q9HAR2 1447 aa14.48□□□□□ -0.09
CD74-208ENST00000522246 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
CD74-208ENST00000522246 PLEKHG3A1L390 1219 aa14.47□□□□□ -0.09
CD74-208ENST00000522246 ANKARQ7Z5J8 1434 aa14.47□□□□□ -0.09
CD74-208ENST00000522246 NPC1L1Q9UHC9 1359 aa14.47□□□□□ -0.09
CD74-208ENST00000522246 CCER2I3L3R5 266 aa14.46□□□□□ -0.09
CD74-208ENST00000522246 PRKRIP1Q9H875 184 aaPredicted RBP14.46□□□□□ -0.09
CD74-208ENST00000522246 MYOM1P52179 1685 aa14.46□□□□□ -0.1
CD74-208ENST00000522246 ATP7BP35670 1465 aa14.44□□□□□ -0.1
CD74-208ENST00000522246 PPIP5K1Q6PFW1 1433 aa14.44□□□□□ -0.1
CD74-208ENST00000522246 ATF3P18847 181 aa14.44□□□□□ -0.1
CD74-208ENST00000522246 CARD14Q9BXL6 1004 aa14.44□□□□□ -0.1
CD74-208ENST00000522246 TMEM94Q12767 1356 aa14.44□□□□□ -0.1
CD74-208ENST00000522246 CGNL1Q0VF96 1302 aa14.43□□□□□ -0.1
CD74-208ENST00000522246 CDC42BPGQ6DT37 1551 aa14.43□□□□□ -0.1
CD74-208ENST00000522246 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
CD74-208ENST00000522246 CADPS2Q86UW7 1296 aa14.43□□□□□ -0.1
CD74-208ENST00000522246 PRR36Q9H6K5 1346 aa14.42□□□□□ -0.1
CD74-208ENST00000522246 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
CD74-208ENST00000522246 DCCP43146 1447 aa14.41□□□□□ -0.1
CD74-208ENST00000522246 RBM33Q96EV2 1170 aaKnown RBP14.41□□□□□ -0.1
CD74-208ENST00000522246 NSD2O96028 1365 aa14.41□□□□□ -0.1
CD74-208ENST00000522246 MSH6P52701 1360 aa14.41□□□□□ -0.1
CD74-208ENST00000522246 STRCP1A6NGW2 1772 aa14.41□□□□□ -0.1
CD74-208ENST00000522246 FMN2Q9NZ56 1722 aa14.41□□□□□ -0.1
CD74-208ENST00000522246 CPSF1Q10570 1443 aaKnown RBP14.41□□□□□ -0.1
CD74-208ENST00000522246 A0A1W2PP64 1363 aa14.4□□□□□ -0.1
CD74-208ENST00000522246 NGDNQ8NEJ9 315 aaKnown RBP14.4□□□□□ -0.1
CD74-208ENST00000522246 ITSN1Q15811 1721 aa14.4□□□□□ -0.1
CD74-208ENST00000522246 NALCNQ8IZF0 1738 aa14.4□□□□□ -0.1
CD74-208ENST00000522246 NSD3Q9BZ95 1437 aa14.4□□□□□ -0.1
CD74-208ENST00000522246 BRD4O60885 1362 aaPredicted RBP14.39□□□□□ -0.11
CD74-208ENST00000522246 NUTM2FA1L443 756 aa14.39□□□□□ -0.11
CD74-208ENST00000522246 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
CD74-208ENST00000522246 LRRC7Q96NW7 1537 aa14.39□□□□□ -0.11
CD74-208ENST00000522246 ACEP12821 1306 aa14.39□□□□□ -0.11
CD74-208ENST00000522246 PARD3Q8TEW0 1356 aa14.38□□□□□ -0.11
CD74-208ENST00000522246 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
CD74-208ENST00000522246 MYBBP1AQ9BQG0 1328 aaKnown RBP14.38□□□□□ -0.11
CD74-208ENST00000522246 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
CD74-208ENST00000522246 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
CD74-208ENST00000522246 ESCO1Q5FWF5 840 aa14.37□□□□□ -0.11
CD74-208ENST00000522246 EDC4Q6P2E9 1401 aaKnown RBP14.37□□□□□ -0.11
CD74-208ENST00000522246 USP32Q8NFA0 1604 aa14.37□□□□□ -0.11
CD74-208ENST00000522246 TOPAZ1Q8N9V7 1692 aa14.36□□□□□ -0.11
CD74-208ENST00000522246 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
CD74-208ENST00000522246 FYB1O15117 783 aa14.35□□□□□ -0.11
CD74-208ENST00000522246 NLRP13Q86W25 1043 aa14.35□□□□□ -0.11
CD74-208ENST00000522246 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
CD74-208ENST00000522246 TTC21AQ8NDW8 1320 aa14.35□□□□□ -0.11
CD74-208ENST00000522246 C1orf167Q5SNV9 1468 aa14.34□□□□□ -0.11
CD74-208ENST00000522246 CNGB1Q14028 1251 aaPredicted RBP14.34□□□□□ -0.11
CD74-208ENST00000522246 RGPD8O14715 1765 aaPredicted RBP14.34□□□□□ -0.11
CD74-208ENST00000522246 AKAP12Q02952 1782 aa14.34□□□□□ -0.11
CD74-208ENST00000522246 PSME1Q06323 249 aa14.33□□□□□ -0.12
CD74-208ENST00000522246 TTC21BQ7Z4L5 1316 aa14.33□□□□□ -0.12
CD74-208ENST00000522246 USP6P35125 1406 aa14.32□□□□□ -0.12
CD74-208ENST00000522246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.32□□□□□ -0.12
CD74-208ENST00000522246 SLAIN2Q9P270 581 aa14.32□□□□□ -0.12
CD74-208ENST00000522246 MST1RQ04912 1400 aa14.32□□□□□ -0.12
CD74-208ENST00000522246 XIRP1Q702N8 1843 aaKnown RBP14.31□□□□□ -0.12
CD74-208ENST00000522246 MON2Q7Z3U7 1717 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms