RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 WAPLQ7Z5K2 1190 aa27.17■■□□□ 1.94
TOP1MT-216ENST00000522121 HRCP23327 699 aa27.16■■□□□ 1.94
TOP1MT-216ENST00000522121 C14orf93Q9H972 538 aaKnown RBP27.16■■□□□ 1.94
TOP1MT-216ENST00000522121 YTHDC2Q9H6S0 1430 aaKnown RBP27.15■■□□□ 1.94
TOP1MT-216ENST00000522121 CDC42BPGQ6DT37 1551 aa27.14■■□□□ 1.94
TOP1MT-216ENST00000522121 MYOM2P54296 1465 aa27.14■■□□□ 1.94
TOP1MT-216ENST00000522121 PNPLA6Q8IY17 1366 aa27.14■■□□□ 1.94
TOP1MT-216ENST00000522121 ESCO1Q5FWF5 840 aa27.13■■□□□ 1.93
TOP1MT-216ENST00000522121 SOS2Q07890 1332 aaPredicted RBP27.12■■□□□ 1.93
TOP1MT-216ENST00000522121 NRXN1Q9ULB1 1477 aa27.12■■□□□ 1.93
TOP1MT-216ENST00000522121 DHX57Q6P158 1386 aaKnown RBP27.11■■□□□ 1.93
TOP1MT-216ENST00000522121 CFAP70Q5T0N1 1121 aa27.11■■□□□ 1.93
TOP1MT-216ENST00000522121 SIRT1Q96EB6 747 aa27.11■■□□□ 1.93
TOP1MT-216ENST00000522121 LAMC1P11047 1609 aa27.1■■□□□ 1.93
TOP1MT-216ENST00000522121 KNDC1Q76NI1 1749 aa27.1■■□□□ 1.93
TOP1MT-216ENST00000522121 NPHP3Q7Z494 1330 aa27.09■■□□□ 1.93
TOP1MT-216ENST00000522121 PLEKHH1Q9ULM0 1364 aa27.09■■□□□ 1.93
TOP1MT-216ENST00000522121 AFF2P51816 1311 aa27.07■■□□□ 1.92
TOP1MT-216ENST00000522121 NUTM2FA1L443 756 aa27.06■■□□□ 1.92
TOP1MT-216ENST00000522121 C8orf37Q96NL8 207 aa27.05■■□□□ 1.92
TOP1MT-216ENST00000522121 RXRBP28702 533 aa27.04■■□□□ 1.92
TOP1MT-216ENST00000522121 FOXO3O43524 673 aa27.02■■□□□ 1.92
TOP1MT-216ENST00000522121 DCAF11Q8TEB1 546 aa27.02■■□□□ 1.92
TOP1MT-216ENST00000522121 STAC3Q96MF2 364 aa27.02■■□□□ 1.92
TOP1MT-216ENST00000522121 KDM2AQ9Y2K7 1162 aa27.02■■□□□ 1.92
TOP1MT-216ENST00000522121 ADAMTS2O95450 1211 aa27.01■■□□□ 1.91
TOP1MT-216ENST00000522121 NGLY1Q96IV0 654 aa27■■□□□ 1.91
TOP1MT-216ENST00000522121 PRAM1Q96QH2 718 aa27■■□□□ 1.91
TOP1MT-216ENST00000522121 POGKQ9P215 609 aa26.99■■□□□ 1.91
TOP1MT-216ENST00000522121 XPCQ01831 940 aaPredicted RBP26.97■■□□□ 1.91
TOP1MT-216ENST00000522121 SAFB2Q14151 953 aaKnown RBP eCLIP26.97■■□□□ 1.91
TOP1MT-216ENST00000522121 PXDNQ92626 1479 aa26.97■■□□□ 1.91
TOP1MT-216ENST00000522121 FMN2Q9NZ56 1722 aa26.96■■□□□ 1.91
TOP1MT-216ENST00000522121 QTRT2Q9H974 415 aaKnown RBP26.95■■□□□ 1.9
TOP1MT-216ENST00000522121 DLC1Q96QB1 1528 aa26.94■■□□□ 1.9
TOP1MT-216ENST00000522121 TRAK1Q9UPV9 953 aa26.93■■□□□ 1.9
TOP1MT-216ENST00000522121 COL22A1Q8NFW1 1626 aaPredicted RBP26.92■■□□□ 1.9
TOP1MT-216ENST00000522121 CDK12Q9NYV4 1490 aaPredicted RBP26.92■■□□□ 1.9
TOP1MT-216ENST00000522121 ADGRB1O14514 1584 aa26.92■■□□□ 1.9
TOP1MT-216ENST00000522121 RBM6P78332 1123 aaKnown RBP26.91■■□□□ 1.9
TOP1MT-216ENST00000522121 PHF8Q9UPP1 1060 aa26.91■■□□□ 1.9
TOP1MT-216ENST00000522121 KIF1AQ12756 1690 aa26.91■■□□□ 1.9
TOP1MT-216ENST00000522121 KRT28Q7Z3Y7 464 aa26.89■■□□□ 1.9
TOP1MT-216ENST00000522121 USP21Q9UK80 565 aa26.89■■□□□ 1.9
TOP1MT-216ENST00000522121 PSME1Q06323 249 aa26.87■■□□□ 1.89
TOP1MT-216ENST00000522121 SPATA31A3Q5VYP0 1347 aa26.87■■□□□ 1.89
TOP1MT-216ENST00000522121 FNBP4Q8N3X1 1017 aaPredicted RBP26.86■■□□□ 1.89
TOP1MT-216ENST00000522121 ANKARQ7Z5J8 1434 aa26.84■■□□□ 1.89
TOP1MT-216ENST00000522121 HIRIP3Q9BW71 556 aaPredicted RBP26.84■■□□□ 1.89
TOP1MT-216ENST00000522121 TRPC5Q9UL62 973 aaPredicted RBP26.84■■□□□ 1.89
TOP1MT-216ENST00000522121 MINK1Q8N4C8 1332 aaPredicted RBP26.83■■□□□ 1.89
TOP1MT-216ENST00000522121 EIF3AQ14152 1382 aaKnown RBP26.83■■□□□ 1.88
TOP1MT-216ENST00000522121 ADGRB2O60241 1585 aa26.82■■□□□ 1.88
TOP1MT-216ENST00000522121 UPF1Q92900 1129 aaKnown RBP eCLIP26.81■■□□□ 1.88
TOP1MT-216ENST00000522121 PMFBP1Q8TBY8 1022 aa26.79■■□□□ 1.88
TOP1MT-216ENST00000522121 RGS12O14924 1447 aa26.79■■□□□ 1.88
TOP1MT-216ENST00000522121 TNS3Q68CZ2 1445 aa26.79■■□□□ 1.88
TOP1MT-216ENST00000522121 HAP1P54257 671 aaPredicted RBP26.78■■□□□ 1.88
TOP1MT-216ENST00000522121 RGPD8O14715 1765 aaPredicted RBP26.78■■□□□ 1.88
TOP1MT-216ENST00000522121 SBNO1A3KN83 1393 aa26.77■■□□□ 1.88
TOP1MT-216ENST00000522121 WASLO00401 505 aaPredicted RBP26.77■■□□□ 1.88
TOP1MT-216ENST00000522121 LMOD2Q6P5Q4 547 aa26.77■■□□□ 1.88
TOP1MT-216ENST00000522121 ATRNO75882 1429 aa26.75■■□□□ 1.87
TOP1MT-216ENST00000522121 ARHGEF10O15013 1369 aa26.74■■□□□ 1.87
TOP1MT-216ENST00000522121 BCL9LQ86UU0 1499 aa26.74■■□□□ 1.87
TOP1MT-216ENST00000522121 USP32Q8NFA0 1604 aa26.73■■□□□ 1.87
TOP1MT-216ENST00000522121 TULP4Q9NRJ4 1543 aa26.73■■□□□ 1.87
TOP1MT-216ENST00000522121 GPRASP1Q5JY77 1395 aa26.72■■□□□ 1.87
TOP1MT-216ENST00000522121 MARF1Q9Y4F3 1742 aaKnown RBP26.72■■□□□ 1.87
TOP1MT-216ENST00000522121 PRR36Q9H6K5 1346 aa26.71■■□□□ 1.87
TOP1MT-216ENST00000522121 PLEKHG5O94827 1062 aa26.7■■□□□ 1.86
TOP1MT-216ENST00000522121 CABLES1Q8TDN4 633 aa26.7■■□□□ 1.86
TOP1MT-216ENST00000522121 UNC5CLQ8IV45 518 aa26.69■■□□□ 1.86
TOP1MT-216ENST00000522121 NGDNQ8NEJ9 315 aaKnown RBP26.68■■□□□ 1.86
TOP1MT-216ENST00000522121 GJD4Q96KN9 370 aaPredicted RBP26.68■■□□□ 1.86
TOP1MT-216ENST00000522121 ARHGEF28Q8N1W1 1705 aaKnown RBP26.68■■□□□ 1.86
TOP1MT-216ENST00000522121 KIAA1210Q9ULL0 1709 aa26.67■■□□□ 1.86
TOP1MT-216ENST00000522121 SLIT2O94813 1529 aa26.66■■□□□ 1.86
TOP1MT-216ENST00000522121 NUDT16Q96DE0 195 aaKnown RBP26.65■■□□□ 1.86
TOP1MT-216ENST00000522121 ATAD2Q6PL18 1390 aa26.65■■□□□ 1.86
TOP1MT-216ENST00000522121 NBPF1Q3BBV0 1214 aa26.64■■□□□ 1.86
TOP1MT-216ENST00000522121 CDK19Q9BWU1 502 aa26.63■■□□□ 1.85
TOP1MT-216ENST00000522121 PAK3O75914 559 aaPredicted RBP26.61■■□□□ 1.85
TOP1MT-216ENST00000522121 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.61■■□□□ 1.85
TOP1MT-216ENST00000522121 L3MBTL2Q969R5 705 aa26.6■■□□□ 1.85
TOP1MT-216ENST00000522121 ATP7BP35670 1465 aa26.6■■□□□ 1.85
TOP1MT-216ENST00000522121 TRPM3Q9HCF6 1732 aaPredicted RBP26.59■■□□□ 1.85
TOP1MT-216ENST00000522121 RALGAPBQ86X10 1494 aa26.57■■□□□ 1.84
TOP1MT-216ENST00000522121 SIN3AQ96ST3 1273 aa26.57■■□□□ 1.84
TOP1MT-216ENST00000522121 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
TOP1MT-216ENST00000522121 FAM83GA6ND36 823 aa26.56■■□□□ 1.84
TOP1MT-216ENST00000522121 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
TOP1MT-216ENST00000522121 VPS72Q15906 364 aa26.56■■□□□ 1.84
TOP1MT-216ENST00000522121 CCDC9Q9Y3X0 531 aaKnown RBP26.56■■□□□ 1.84
TOP1MT-216ENST00000522121 CCDC61Q9Y6R9 512 aa26.56■■□□□ 1.84
TOP1MT-216ENST00000522121 CENPJQ9HC77 1338 aaPredicted RBP26.56■■□□□ 1.84
TOP1MT-216ENST00000522121 ABCA3Q99758 1704 aa26.56■■□□□ 1.84
TOP1MT-216ENST00000522121 ALS2Q96Q42 1657 aa26.54■■□□□ 1.84
TOP1MT-216ENST00000522121 GLI3P10071 1580 aa26.52■■□□□ 1.84
TOP1MT-216ENST00000522121 SRPK2P78362 688 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms