RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 C2orf72A6NCS6 295 aa12.44□□□□□ -0.42
VPS13B-210ENST00000521932 KANK1Q14678 1352 aa12.43□□□□□ -0.42
VPS13B-210ENST00000521932 RAB3GAP2Q9H2M9 1393 aa12.43□□□□□ -0.42
VPS13B-210ENST00000521932 VWDEQ8N2E2 1590 aa12.43□□□□□ -0.42
VPS13B-210ENST00000521932 UNC13BO14795 1591 aa12.43□□□□□ -0.42
VPS13B-210ENST00000521932 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
VPS13B-210ENST00000521932 MADDQ8WXG6 1647 aa12.42□□□□□ -0.42
VPS13B-210ENST00000521932 NUP155O75694 1391 aa12.42□□□□□ -0.42
VPS13B-210ENST00000521932 LMTK2Q8IWU2 1503 aa12.42□□□□□ -0.42
VPS13B-210ENST00000521932 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
VPS13B-210ENST00000521932 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
VPS13B-210ENST00000521932 ABCC3O15438 1527 aa12.41□□□□□ -0.42
VPS13B-210ENST00000521932 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
VPS13B-210ENST00000521932 PTPRMP28827 1452 aa12.4□□□□□ -0.42
VPS13B-210ENST00000521932 ARHGAP31Q2M1Z3 1444 aa12.4□□□□□ -0.42
VPS13B-210ENST00000521932 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
VPS13B-210ENST00000521932 DOK7Q18PE1 504 aa12.4□□□□□ -0.42
VPS13B-210ENST00000521932 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
VPS13B-210ENST00000521932 ZC3H13Q5T200 1668 aaKnown RBP12.4□□□□□ -0.42
VPS13B-210ENST00000521932 MROH2AA6NES4 1674 aa12.39□□□□□ -0.43
VPS13B-210ENST00000521932 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
VPS13B-210ENST00000521932 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
VPS13B-210ENST00000521932 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
VPS13B-210ENST00000521932 IQGAP3Q86VI3 1631 aa12.38□□□□□ -0.43
VPS13B-210ENST00000521932 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
VPS13B-210ENST00000521932 HOXB1P14653 301 aaPredicted RBP12.37□□□□□ -0.43
VPS13B-210ENST00000521932 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
VPS13B-210ENST00000521932 RIMS1Q86UR5 1692 aaKnown RBP12.37□□□□□ -0.43
VPS13B-210ENST00000521932 PZPP20742 1482 aa12.36□□□□□ -0.43
VPS13B-210ENST00000521932 EMP3P54852 163 aa12.36□□□□□ -0.43
VPS13B-210ENST00000521932 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
VPS13B-210ENST00000521932 NPATQ14207 1427 aa12.36□□□□□ -0.43
VPS13B-210ENST00000521932 RPRD2Q5VT52 1461 aaKnown RBP12.35□□□□□ -0.43
VPS13B-210ENST00000521932 CEP152O94986 1710 aa12.35□□□□□ -0.43
VPS13B-210ENST00000521932 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
VPS13B-210ENST00000521932 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
VPS13B-210ENST00000521932 C3P01024 1663 aa12.35□□□□□ -0.43
VPS13B-210ENST00000521932 CAMSAP1Q5T5Y3 1602 aa12.34□□□□□ -0.43
VPS13B-210ENST00000521932 EFCAB6Q5THR3 1501 aa12.34□□□□□ -0.43
VPS13B-210ENST00000521932 GPR153Q6NV75 609 aa12.34□□□□□ -0.43
VPS13B-210ENST00000521932 TET3O43151 1660 aa12.34□□□□□ -0.43
VPS13B-210ENST00000521932 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
VPS13B-210ENST00000521932 NOS1P29475 1434 aa12.31□□□□□ -0.44
VPS13B-210ENST00000521932 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
VPS13B-210ENST00000521932 SPATA31D1Q6ZQQ2 1576 aa12.3□□□□□ -0.44
VPS13B-210ENST00000521932 PTPRTO14522 1441 aa12.3□□□□□ -0.44
VPS13B-210ENST00000521932 E9PCH4 1651 aa12.3□□□□□ -0.44
VPS13B-210ENST00000521932 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
VPS13B-210ENST00000521932 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.448e-10■■■□□ 19
VPS13B-210ENST00000521932 HS3ST6Q96QI5 342 aa12.3□□□□□ -0.44
VPS13B-210ENST00000521932 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
VPS13B-210ENST00000521932 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
VPS13B-210ENST00000521932 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
VPS13B-210ENST00000521932 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
VPS13B-210ENST00000521932 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
VPS13B-210ENST00000521932 TNRQ92752 1358 aa12.29□□□□□ -0.44
VPS13B-210ENST00000521932 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
VPS13B-210ENST00000521932 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
VPS13B-210ENST00000521932 PREX1Q8TCU6 1659 aa12.28□□□□□ -0.44
VPS13B-210ENST00000521932 PLA2R1Q13018 1463 aa12.27□□□□□ -0.45
VPS13B-210ENST00000521932 IDI1Q13907 227 aa12.26□□□□□ -0.45
VPS13B-210ENST00000521932 DSG2Q14126 1118 aa12.26□□□□□ -0.45
VPS13B-210ENST00000521932 NLRP1Q9C000 1473 aa12.26□□□□□ -0.45
VPS13B-210ENST00000521932 FOXK1P85037 733 aa12.25□□□□□ -0.45
VPS13B-210ENST00000521932 CRISPLD2Q9H0B8 497 aa12.25□□□□□ -0.45
VPS13B-210ENST00000521932 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
VPS13B-210ENST00000521932 SYNMO15061 1565 aa12.25□□□□□ -0.45
VPS13B-210ENST00000521932 CFAP65Q6ZU64 1925 aaKnown RBP12.25□□□□□ -0.45
VPS13B-210ENST00000521932 UHRF1BP1Q6BDS2 1440 aa12.24□□□□□ -0.45
VPS13B-210ENST00000521932 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
VPS13B-210ENST00000521932 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
VPS13B-210ENST00000521932 SLC34A2O95436 690 aa12.23□□□□□ -0.45
VPS13B-210ENST00000521932 TRPM2O94759 1503 aa12.22□□□□□ -0.45
VPS13B-210ENST00000521932 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
VPS13B-210ENST00000521932 PLPP6Q8IY26 295 aa12.22□□□□□ -0.45
VPS13B-210ENST00000521932 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
VPS13B-210ENST00000521932 SPHKAPQ2M3C7 1700 aa12.22□□□□□ -0.45
VPS13B-210ENST00000521932 PIK3C2BO00750 1634 aa12.22□□□□□ -0.45
VPS13B-210ENST00000521932 LMTK3Q96Q04 1460 aa12.21□□□□□ -0.45
VPS13B-210ENST00000521932 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
VPS13B-210ENST00000521932 CADPS2Q86UW7 1296 aa12.21□□□□□ -0.45
VPS13B-210ENST00000521932 THEMISQ8N1K5 641 aaPredicted RBP12.21□□□□□ -0.45
VPS13B-210ENST00000521932 KRTAP3-3Q9BYR6 98 aa12.21□□□□□ -0.45
VPS13B-210ENST00000521932 KRTAP3-2Q9BYR7 98 aa12.21□□□□□ -0.45
VPS13B-210ENST00000521932 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
VPS13B-210ENST00000521932 MYO3AQ8NEV4 1616 aa12.21□□□□□ -0.46
VPS13B-210ENST00000521932 ERBB3P21860 1342 aa12.2□□□□□ -0.46
VPS13B-210ENST00000521932 CEP170BQ9Y4F5 1589 aaPredicted RBP12.2□□□□□ -0.46
VPS13B-210ENST00000521932 ZNF142P52746 1687 aaPredicted RBP12.19□□□□□ -0.46
VPS13B-210ENST00000521932 UGGT1Q9NYU2 1555 aa12.19□□□□□ -0.46
VPS13B-210ENST00000521932 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
VPS13B-210ENST00000521932 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
VPS13B-210ENST00000521932 CCDC144AA2RUR9 1427 aa12.19□□□□□ -0.46
VPS13B-210ENST00000521932 NUDT7P0C024 238 aa12.17□□□□□ -0.46
VPS13B-210ENST00000521932 CLTCL1P53675 1640 aa12.17□□□□□ -0.46
VPS13B-210ENST00000521932 TMEM131LA2VDJ0 1609 aa12.16□□□□□ -0.46
VPS13B-210ENST00000521932 UBR1Q8IWV7 1749 aa12.16□□□□□ -0.46
VPS13B-210ENST00000521932 CLSPNQ9HAW4 1339 aa12.15□□□□□ -0.46
VPS13B-210ENST00000521932 NEURL4Q96JN8 1562 aa12.15□□□□□ -0.46
VPS13B-210ENST00000521932 HSPA2P54652 639 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms