RNA–Protein interactions for RNA: ENST00000521604.6

TCEA1-208, Transcript of transcription elongation factor A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-208ENST00000521604 TSR2Q969E8 191 aaKnown RBP22.59■■□□□ 1.21
TCEA1-208ENST00000521604 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
TCEA1-208ENST00000521604 TMEM132EQ6IEE7 984 aa22.59■■□□□ 1.21
TCEA1-208ENST00000521604 PANK2Q9BZ23 570 aa22.58■■□□□ 1.2
TCEA1-208ENST00000521604 FTSJ3Q8IY81 847 aaKnown RBP22.57■■□□□ 1.2
TCEA1-208ENST00000521604 RSPH6AQ9H0K4 717 aa22.57■■□□□ 1.2
TCEA1-208ENST00000521604 U2AF1L5P0DN76 240 aaPredicted RBP22.56■■□□□ 1.2
TCEA1-208ENST00000521604 XRCC6P12956 609 aaKnown RBP eCLIP22.56■■□□□ 1.2
TCEA1-208ENST00000521604 U2AF1Q01081 240 aaKnown RBP eCLIP22.56■■□□□ 1.24e-7■■■■□ 24.2
TCEA1-208ENST00000521604 L1TD1Q5T7N2 865 aaKnown RBP22.55■■□□□ 1.2
TCEA1-208ENST00000521604 CEP152O94986 1710 aa22.55■■□□□ 1.2
TCEA1-208ENST00000521604 MVPQ14764 893 aaKnown RBP22.54■■□□□ 1.2
TCEA1-208ENST00000521604 WDR63Q8IWG1 891 aa22.54■■□□□ 1.2
TCEA1-208ENST00000521604 VIRMAQ69YN4 1812 aaKnown RBP22.54■■□□□ 1.2
TCEA1-208ENST00000521604 MCM4P33991 863 aa22.54■■□□□ 1.2
TCEA1-208ENST00000521604 C22orf23Q9BZE7 217 aa22.54■■□□□ 1.2
TCEA1-208ENST00000521604 KANK1Q14678 1352 aa22.54■■□□□ 1.2
TCEA1-208ENST00000521604 GOLGA6L3A6NEY3 463 aa22.52■■□□□ 1.2
TCEA1-208ENST00000521604 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
TCEA1-208ENST00000521604 ABCC1P33527 1531 aa22.52■■□□□ 1.2
TCEA1-208ENST00000521604 NUTM2DQ5VT03 806 aaPredicted RBP22.52■■□□□ 1.19
TCEA1-208ENST00000521604 DZIP1LQ8IYY4 767 aaKnown RBP22.52■■□□□ 1.19
TCEA1-208ENST00000521604 ZKSCAN2Q63HK3 967 aa22.51■■□□□ 1.19
TCEA1-208ENST00000521604 SLC24A1O60721 1099 aa22.5■■□□□ 1.19
TCEA1-208ENST00000521604 SMC4Q9NTJ3 1288 aa22.5■■□□□ 1.19
TCEA1-208ENST00000521604 ITPRIPQ8IWB1 547 aa22.5■■□□□ 1.19
TCEA1-208ENST00000521604 MYH16Q9H6N6 1097 aa22.5■■□□□ 1.19
TCEA1-208ENST00000521604 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
TCEA1-208ENST00000521604 EXOSC9Q06265 439 aaKnown RBP22.48■■□□□ 1.19
TCEA1-208ENST00000521604 SAFB2Q14151 953 aaKnown RBP eCLIP22.48■■□□□ 1.19
TCEA1-208ENST00000521604 ABCA6Q8N139 1617 aa22.47■■□□□ 1.19
TCEA1-208ENST00000521604 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
TCEA1-208ENST00000521604 TRAK2O60296 914 aa22.47■■□□□ 1.19
TCEA1-208ENST00000521604 UBE2Q2Q8WVN8 375 aa22.47■■□□□ 1.19
TCEA1-208ENST00000521604 TRIM27P14373 513 aa22.47■■□□□ 1.19
TCEA1-208ENST00000521604 AAMPQ13685 434 aa22.46■■□□□ 1.19
TCEA1-208ENST00000521604 NOS1P29475 1434 aa22.45■■□□□ 1.19
TCEA1-208ENST00000521604 CHMP5Q9NZZ3 219 aa22.45■■□□□ 1.18
TCEA1-208ENST00000521604 IQSEC2Q5JU85 1478 aa22.44■■□□□ 1.18
TCEA1-208ENST00000521604 SSH1Q8WYL5 1049 aa22.44■■□□□ 1.18
TCEA1-208ENST00000521604 SHPRHQ149N8 1683 aa22.44■■□□□ 1.18
TCEA1-208ENST00000521604 ZFYVE16Q7Z3T8 1539 aa22.44■■□□□ 1.18
TCEA1-208ENST00000521604 MAP3K4Q9Y6R4 1608 aa22.44■■□□□ 1.18
TCEA1-208ENST00000521604 FSD2A1L4K1 749 aa22.43■■□□□ 1.18
TCEA1-208ENST00000521604 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
TCEA1-208ENST00000521604 NOB1Q9ULX3 412 aaKnown RBP22.42■■□□□ 1.18
TCEA1-208ENST00000521604 CABP2Q9NPB3 220 aa22.41■■□□□ 1.18
TCEA1-208ENST00000521604 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
TCEA1-208ENST00000521604 NAP1L5Q96NT1 182 aaPredicted RBP22.4■■□□□ 1.18
TCEA1-208ENST00000521604 HSCBQ8IWL3 235 aa22.4■■□□□ 1.18
TCEA1-208ENST00000521604 ZNF518AQ6AHZ1 1483 aa22.4■■□□□ 1.18
TCEA1-208ENST00000521604 TMEM57Q8N5G2 664 aa22.4■■□□□ 1.18
TCEA1-208ENST00000521604 FOXD4L1Q9NU39 408 aa22.4■■□□□ 1.18
TCEA1-208ENST00000521604 TET3O43151 1660 aa22.39■■□□□ 1.18
TCEA1-208ENST00000521604 LNPKQ9C0E8 428 aa22.39■■□□□ 1.18
TCEA1-208ENST00000521604 CHD1O14646 1710 aa22.39■■□□□ 1.17
TCEA1-208ENST00000521604 MYOM2P54296 1465 aa22.38■■□□□ 1.17
TCEA1-208ENST00000521604 GGNBP2Q9H3C7 697 aa22.38■■□□□ 1.17
TCEA1-208ENST00000521604 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
TCEA1-208ENST00000521604 ZCCHC11Q5TAX3 1644 aaKnown RBP22.37■■□□□ 1.17
TCEA1-208ENST00000521604 KIAA1210Q9ULL0 1709 aa22.36■■□□□ 1.17
TCEA1-208ENST00000521604 C14orf93Q9H972 538 aaKnown RBP22.36■■□□□ 1.17
TCEA1-208ENST00000521604 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
TCEA1-208ENST00000521604 TRIM35Q9UPQ4 493 aa22.36■■□□□ 1.17
TCEA1-208ENST00000521604 SBNO2Q9Y2G9 1366 aa22.36■■□□□ 1.17
TCEA1-208ENST00000521604 TMPOP42166 694 aaKnown RBP22.36■■□□□ 1.17
TCEA1-208ENST00000521604 GGT6Q6P531 493 aa22.36■■□□□ 1.17
TCEA1-208ENST00000521604 PNNQ9H307 717 aaKnown RBP22.36■■□□□ 1.17
TCEA1-208ENST00000521604 HDAC1Q13547 482 aaPredicted RBP22.35■■□□□ 1.17
TCEA1-208ENST00000521604 ZMYM3Q14202 1370 aa22.35■■□□□ 1.17
TCEA1-208ENST00000521604 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
TCEA1-208ENST00000521604 ZNF692Q9BU19 519 aaPredicted RBP22.34■■□□□ 1.17
TCEA1-208ENST00000521604 ATP7AQ04656 1500 aa22.34■■□□□ 1.17
TCEA1-208ENST00000521604 DEPDC5O75140 1603 aa22.33■■□□□ 1.16
TCEA1-208ENST00000521604 SMC5Q8IY18 1101 aa22.32■■□□□ 1.16
TCEA1-208ENST00000521604 GRPEL1Q9HAV7 217 aa22.32■■□□□ 1.16
TCEA1-208ENST00000521604 STK26Q9P289 416 aa22.32■■□□□ 1.16
TCEA1-208ENST00000521604 RIPK4P57078 832 aa22.32■■□□□ 1.16
TCEA1-208ENST00000521604 FANCAO15360 1455 aa22.31■■□□□ 1.16
TCEA1-208ENST00000521604 MRE11P49959 708 aa22.31■■□□□ 1.16
TCEA1-208ENST00000521604 ZBTB40Q9NUA8 1239 aa22.31■■□□□ 1.16
TCEA1-208ENST00000521604 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
TCEA1-208ENST00000521604 TNPO1Q92973 898 aaKnown RBP22.31■■□□□ 1.16
TCEA1-208ENST00000521604 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
TCEA1-208ENST00000521604 MROH2AA6NES4 1674 aa22.31■■□□□ 1.16
TCEA1-208ENST00000521604 C1orf115Q9H7X2 142 aa22.3■■□□□ 1.16
TCEA1-208ENST00000521604 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
TCEA1-208ENST00000521604 CFAP65Q6ZU64 1925 aaKnown RBP22.29■■□□□ 1.16
TCEA1-208ENST00000521604 VWDEQ8N2E2 1590 aa22.29■■□□□ 1.16
TCEA1-208ENST00000521604 GAS2L3Q86XJ1 694 aa22.28■■□□□ 1.16
TCEA1-208ENST00000521604 EVC2Q86UK5 1308 aa22.28■■□□□ 1.16
TCEA1-208ENST00000521604 CD2BP2O95400 341 aaKnown RBP22.28■■□□□ 1.16
TCEA1-208ENST00000521604 CLCN1P35523 988 aa22.28■■□□□ 1.16
TCEA1-208ENST00000521604 DDX11L8A8MPP1 907 aa22.28■■□□□ 1.16
TCEA1-208ENST00000521604 HSP90AA1P07900 732 aaKnown RBP22.28■■□□□ 1.16
TCEA1-208ENST00000521604 SRPK2P78362 688 aaKnown RBP22.27■■□□□ 1.16
TCEA1-208ENST00000521604 RBM42Q9BTD8 480 aaKnown RBP22.27■■□□□ 1.16
TCEA1-208ENST00000521604 KIF1BO60333 1816 aa22.27■■□□□ 1.16
TCEA1-208ENST00000521604 NUCB1Q02818 461 aa22.27■■□□□ 1.16
TCEA1-208ENST00000521604 NRXN1Q9ULB1 1477 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms