RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 FAM135BQ49AJ0 1406 aa20.88■□□□□ 0.93
SREK1-209ENST00000520953 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.88■□□□□ 0.93
SREK1-209ENST00000520953 CABP2Q9NPB3 220 aa20.87■□□□□ 0.93
SREK1-209ENST00000520953 PIK3R4Q99570 1358 aa20.86■□□□□ 0.93
SREK1-209ENST00000520953 MYOM1P52179 1685 aa20.85■□□□□ 0.93
SREK1-209ENST00000520953 PTCH1Q13635 1447 aa20.85■□□□□ 0.93
SREK1-209ENST00000520953 SIRT1Q96EB6 747 aa20.85■□□□□ 0.93
SREK1-209ENST00000520953 EVC2Q86UK5 1308 aa20.83■□□□□ 0.93
SREK1-209ENST00000520953 STRCP1A6NGW2 1772 aa20.82■□□□□ 0.92
SREK1-209ENST00000520953 MIER1Q8N108 512 aa20.82■□□□□ 0.92
SREK1-209ENST00000520953 CDK19Q9BWU1 502 aa20.82■□□□□ 0.92
SREK1-209ENST00000520953 SRPK2P78362 688 aaKnown RBP20.81■□□□□ 0.92
SREK1-209ENST00000520953 CDCA8Q53HL2 280 aa20.8■□□□□ 0.92
SREK1-209ENST00000520953 NWD1Q149M9 1564 aa20.79■□□□□ 0.92
SREK1-209ENST00000520953 CNGB1Q14028 1251 aaPredicted RBP20.79■□□□□ 0.92
SREK1-209ENST00000520953 PANK3Q9H999 370 aa20.79■□□□□ 0.92
SREK1-209ENST00000520953 SLC12A5Q9H2X9 1139 aa20.78■□□□□ 0.92
SREK1-209ENST00000520953 WASLO00401 505 aaPredicted RBP20.78■□□□□ 0.92
SREK1-209ENST00000520953 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
SREK1-209ENST00000520953 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
SREK1-209ENST00000520953 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
SREK1-209ENST00000520953 NALCNQ8IZF0 1738 aa20.75■□□□□ 0.91
SREK1-209ENST00000520953 ADGRB2O60241 1585 aa20.75■□□□□ 0.91
SREK1-209ENST00000520953 PRR36Q9H6K5 1346 aa20.74■□□□□ 0.91
SREK1-209ENST00000520953 ZNF335Q9H4Z2 1342 aaPredicted RBP20.74■□□□□ 0.91
SREK1-209ENST00000520953 PER1O15534 1290 aaPredicted RBP20.72■□□□□ 0.91
SREK1-209ENST00000520953 PROSER2Q86WR7 435 aaPredicted RBP20.72■□□□□ 0.91
SREK1-209ENST00000520953 CARD14Q9BXL6 1004 aa20.71■□□□□ 0.91
SREK1-209ENST00000520953 ATP7BP35670 1465 aa20.7■□□□□ 0.9
SREK1-209ENST00000520953 NUDT16Q96DE0 195 aaKnown RBP20.7■□□□□ 0.9
SREK1-209ENST00000520953 CABP1Q9NZU7 370 aa20.7■□□□□ 0.9
SREK1-209ENST00000520953 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
SREK1-209ENST00000520953 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
SREK1-209ENST00000520953 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
SREK1-209ENST00000520953 USP32Q8NFA0 1604 aa20.69■□□□□ 0.9
SREK1-209ENST00000520953 CD163L1Q9NR16 1453 aa20.68■□□□□ 0.9
SREK1-209ENST00000520953 TMEM94Q12767 1356 aa20.67■□□□□ 0.9
SREK1-209ENST00000520953 ADGRL3Q9HAR2 1447 aa20.67■□□□□ 0.9
SREK1-209ENST00000520953 C14orf37Q86TY3 774 aa20.67■□□□□ 0.9
SREK1-209ENST00000520953 RGPD8O14715 1765 aaPredicted RBP20.67■□□□□ 0.9
SREK1-209ENST00000520953 PPIP5K1Q6PFW1 1433 aa20.66■□□□□ 0.9
SREK1-209ENST00000520953 ANP32CO43423 234 aa20.66■□□□□ 0.9
SREK1-209ENST00000520953 A0A1W2PP64 1363 aa20.66■□□□□ 0.9
SREK1-209ENST00000520953 FMN2Q9NZ56 1722 aa20.64■□□□□ 0.89
SREK1-209ENST00000520953 XIRP1Q702N8 1843 aaKnown RBP20.64■□□□□ 0.89
SREK1-209ENST00000520953 CENPBP07199 599 aaPredicted RBP20.63■□□□□ 0.89
SREK1-209ENST00000520953 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
SREK1-209ENST00000520953 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
SREK1-209ENST00000520953 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
SREK1-209ENST00000520953 ANKRD36BQ8N2N9 1353 aa20.63■□□□□ 0.89
SREK1-209ENST00000520953 TOPAZ1Q8N9V7 1692 aa20.63■□□□□ 0.89
SREK1-209ENST00000520953 NSD3Q9BZ95 1437 aa20.63■□□□□ 0.89
SREK1-209ENST00000520953 PRKRIP1Q9H875 184 aaPredicted RBP20.63■□□□□ 0.89
SREK1-209ENST00000520953 CCDC61Q9Y6R9 512 aa20.63■□□□□ 0.89
SREK1-209ENST00000520953 SCAF1Q9H7N4 1312 aaKnown RBP20.62■□□□□ 0.89
SREK1-209ENST00000520953 LRRC7Q96NW7 1537 aa20.61■□□□□ 0.89
SREK1-209ENST00000520953 AMER1Q5JTC6 1135 aaPredicted RBP20.61■□□□□ 0.89
SREK1-209ENST00000520953 KNSTRNQ9Y448 316 aa20.61■□□□□ 0.89
SREK1-209ENST00000520953 DMRT2Q9Y5R5 561 aa20.61■□□□□ 0.89
SREK1-209ENST00000520953 PMFBP1Q8TBY8 1022 aa20.6■□□□□ 0.89
SREK1-209ENST00000520953 NINLQ9Y2I6 1382 aa20.59■□□□□ 0.89
SREK1-209ENST00000520953 YTHDC1Q96MU7 727 aaKnown RBP20.58■□□□□ 0.88
SREK1-209ENST00000520953 CCDC184Q52MB2 194 aa20.57■□□□□ 0.88
SREK1-209ENST00000520953 CPSF1Q10570 1443 aaKnown RBP20.57■□□□□ 0.88
SREK1-209ENST00000520953 C19orf44Q9H6X5 657 aa20.56■□□□□ 0.88
SREK1-209ENST00000520953 TERF2IPQ9NYB0 399 aa20.56■□□□□ 0.88
SREK1-209ENST00000520953 ACEP12821 1306 aa20.56■□□□□ 0.88
SREK1-209ENST00000520953 ANKARQ7Z5J8 1434 aa20.55■□□□□ 0.88
SREK1-209ENST00000520953 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
SREK1-209ENST00000520953 KTN1Q86UP2 1357 aaKnown RBP20.54■□□□□ 0.88
SREK1-209ENST00000520953 PLEKHG3A1L390 1219 aa20.54■□□□□ 0.88
SREK1-209ENST00000520953 ITSN1Q15811 1721 aa20.54■□□□□ 0.88
SREK1-209ENST00000520953 AKAP12Q02952 1782 aa20.54■□□□□ 0.88
SREK1-209ENST00000520953 ORAI2Q96SN7 254 aa20.53■□□□□ 0.88
SREK1-209ENST00000520953 PARD3Q8TEW0 1356 aa20.53■□□□□ 0.88
SREK1-209ENST00000520953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.53■□□□□ 0.88
SREK1-209ENST00000520953 MON2Q7Z3U7 1717 aa20.52■□□□□ 0.87
SREK1-209ENST00000520953 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
SREK1-209ENST00000520953 NCOA3Q9Y6Q9 1424 aa20.51■□□□□ 0.87
SREK1-209ENST00000520953 LTBP4Q8N2S1 1624 aa20.5■□□□□ 0.87
SREK1-209ENST00000520953 MST1RQ04912 1400 aa20.5■□□□□ 0.87
SREK1-209ENST00000520953 ATF3P18847 181 aa20.5■□□□□ 0.87
SREK1-209ENST00000520953 MSH6P52701 1360 aa20.5■□□□□ 0.87
SREK1-209ENST00000520953 NGDNQ8NEJ9 315 aaKnown RBP20.49■□□□□ 0.87
SREK1-209ENST00000520953 GGNBP2Q9H3C7 697 aa20.49■□□□□ 0.87
SREK1-209ENST00000520953 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
SREK1-209ENST00000520953 ZRANB1Q9UGI0 708 aa20.49■□□□□ 0.87
SREK1-209ENST00000520953 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
SREK1-209ENST00000520953 FYB1O15117 783 aa20.48■□□□□ 0.87
SREK1-209ENST00000520953 CGNL1Q0VF96 1302 aa20.48■□□□□ 0.87
SREK1-209ENST00000520953 POLR3AO14802 1390 aaPredicted RBP20.48■□□□□ 0.87
SREK1-209ENST00000520953 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
SREK1-209ENST00000520953 NRKQ7Z2Y5 1582 aa20.47■□□□□ 0.87
SREK1-209ENST00000520953 USP6P35125 1406 aa20.47■□□□□ 0.87
SREK1-209ENST00000520953 TNNT2P45379 298 aaPredicted RBP20.47■□□□□ 0.87
SREK1-209ENST00000520953 RALBP1Q15311 655 aa20.47■□□□□ 0.87
SREK1-209ENST00000520953 NME9Q86XW9 330 aa20.47■□□□□ 0.87
SREK1-209ENST00000520953 DCCP43146 1447 aa20.47■□□□□ 0.87
SREK1-209ENST00000520953 EDC4Q6P2E9 1401 aaKnown RBP20.47■□□□□ 0.87
SREK1-209ENST00000520953 CCER2I3L3R5 266 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms