RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 PCDHGC3Q9UN70 934 aa11.61□□□□□ -0.55
LINC00535-204ENST00000520513 MS4A1P11836 297 aa11.6□□□□□ -0.55
LINC00535-204ENST00000520513 SPIRE2Q8WWL2 714 aa11.6□□□□□ -0.55
LINC00535-204ENST00000520513 AK7Q96M32 723 aa11.6□□□□□ -0.55
LINC00535-204ENST00000520513 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
LINC00535-204ENST00000520513 NDUFV2P19404 249 aa11.57□□□□□ -0.56
LINC00535-204ENST00000520513 Q3C1V9 767 aa11.57□□□□□ -0.56
LINC00535-204ENST00000520513 ZNF598Q86UK7 904 aaKnown RBP11.57□□□□□ -0.56
LINC00535-204ENST00000520513 NUTM1Q86Y26 1132 aa11.57□□□□□ -0.56
LINC00535-204ENST00000520513 USB1Q9BQ65 265 aaKnown RBP11.57□□□□□ -0.56
LINC00535-204ENST00000520513 MOXD2PA6NHM9 499 aa11.56□□□□□ -0.56
LINC00535-204ENST00000520513 MMP16P51512 607 aa11.56□□□□□ -0.56
LINC00535-204ENST00000520513 ZNF697Q5TEC3 545 aa11.56□□□□□ -0.56
LINC00535-204ENST00000520513 BEGAINQ9BUH8 593 aa11.55□□□□□ -0.56
LINC00535-204ENST00000520513 GDF9O60383 454 aa11.54□□□□□ -0.56
LINC00535-204ENST00000520513 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
LINC00535-204ENST00000520513 PDE4DQ08499 809 aa11.53□□□□□ -0.56
LINC00535-204ENST00000520513 FDX1P10109 184 aa11.52□□□□□ -0.57
LINC00535-204ENST00000520513 PKD2L1Q9P0L9 805 aa11.52□□□□□ -0.57
LINC00535-204ENST00000520513 TNFRSF10AO00220 468 aa11.51□□□□□ -0.57
LINC00535-204ENST00000520513 PRR20EP86478 221 aa11.51□□□□□ -0.57
LINC00535-204ENST00000520513 PRR20CP86479 221 aa11.51□□□□□ -0.57
LINC00535-204ENST00000520513 PRR20DP86480 221 aa11.51□□□□□ -0.57
LINC00535-204ENST00000520513 PRR20BP86481 221 aa11.51□□□□□ -0.57
LINC00535-204ENST00000520513 PRR20AP86496 221 aa11.51□□□□□ -0.57
LINC00535-204ENST00000520513 TBC1D2Q9BYX2 928 aa11.5□□□□□ -0.57
LINC00535-204ENST00000520513 RPIAP49247 311 aa11.49□□□□□ -0.57
LINC00535-204ENST00000520513 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
LINC00535-204ENST00000520513 RETREG3Q86VR2 466 aa11.47□□□□□ -0.57
LINC00535-204ENST00000520513 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
LINC00535-204ENST00000520513 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
LINC00535-204ENST00000520513 JUNDP17535 347 aa11.45□□□□□ -0.58
LINC00535-204ENST00000520513 FOXC1Q12948 553 aa11.45□□□□□ -0.58
LINC00535-204ENST00000520513 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
LINC00535-204ENST00000520513 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
LINC00535-204ENST00000520513 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
LINC00535-204ENST00000520513 TRIM32Q13049 653 aa11.42□□□□□ -0.58
LINC00535-204ENST00000520513 CCDC24Q8N4L8 307 aa11.42□□□□□ -0.58
LINC00535-204ENST00000520513 SPTLC1O15269 473 aa11.41□□□□□ -0.58
LINC00535-204ENST00000520513 CD2BP2O95400 341 aaKnown RBP11.41□□□□□ -0.58
LINC00535-204ENST00000520513 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
LINC00535-204ENST00000520513 ZBTB24O43167 697 aaPredicted RBP11.4□□□□□ -0.58
LINC00535-204ENST00000520513 LIMD1Q9UGP4 676 aa11.4□□□□□ -0.58
LINC00535-204ENST00000520513 SKOR1P84550 965 aa11.39□□□□□ -0.59
LINC00535-204ENST00000520513 PKDCCQ504Y2 493 aa11.39□□□□□ -0.59
LINC00535-204ENST00000520513 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
LINC00535-204ENST00000520513 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
LINC00535-204ENST00000520513 GPBP1L1Q9HC44 474 aaPredicted RBP11.39□□□□□ -0.59
LINC00535-204ENST00000520513 TOR4AQ9NXH8 423 aa11.39□□□□□ -0.59
LINC00535-204ENST00000520513 DGAT1O75907 488 aa11.38□□□□□ -0.59
LINC00535-204ENST00000520513 GJA5P36382 358 aa11.38□□□□□ -0.59
LINC00535-204ENST00000520513 MTMR2Q13614 643 aa11.38□□□□□ -0.59
LINC00535-204ENST00000520513 RIC3Q7Z5B4 369 aa11.38□□□□□ -0.59
LINC00535-204ENST00000520513 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
LINC00535-204ENST00000520513 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
LINC00535-204ENST00000520513 CFAP99D6REC4 459 aa11.37□□□□□ -0.59
LINC00535-204ENST00000520513 HRCP23327 699 aa11.37□□□□□ -0.59
LINC00535-204ENST00000520513 MYT1Q01538 1121 aa11.37□□□□□ -0.59
LINC00535-204ENST00000520513 FAM187AA6NFU0 413 aa11.36□□□□□ -0.59
LINC00535-204ENST00000520513 QPCTQ16769 361 aa11.35□□□□□ -0.59
LINC00535-204ENST00000520513 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
LINC00535-204ENST00000520513 WNT7AO00755 349 aa11.34□□□□□ -0.59
LINC00535-204ENST00000520513 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
LINC00535-204ENST00000520513 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
LINC00535-204ENST00000520513 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
LINC00535-204ENST00000520513 PTPRNQ16849 979 aa11.32□□□□□ -0.6
LINC00535-204ENST00000520513 ST8SIA5O15466 376 aa11.31□□□□□ -0.6
LINC00535-204ENST00000520513 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
LINC00535-204ENST00000520513 KDM4CQ9H3R0 1056 aa11.31□□□□□ -0.6
LINC00535-204ENST00000520513 EVA1BQ9NVM1 165 aa11.31□□□□□ -0.6
LINC00535-204ENST00000520513 SPDYE5A6NIY4 337 aa11.3□□□□□ -0.6
LINC00535-204ENST00000520513 DESI1Q6ICB0 168 aa11.3□□□□□ -0.6
LINC00535-204ENST00000520513 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
LINC00535-204ENST00000520513 ZBTB3Q9H5J0 574 aa11.3□□□□□ -0.6
LINC00535-204ENST00000520513 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
LINC00535-204ENST00000520513 LILRB3O75022 631 aa11.29□□□□□ -0.6
LINC00535-204ENST00000520513 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
LINC00535-204ENST00000520513 PRPF38BQ5VTL8 546 aaKnown RBP11.29□□□□□ -0.6
LINC00535-204ENST00000520513 CYP4X1Q8N118 509 aa11.29□□□□□ -0.6
LINC00535-204ENST00000520513 POTECB2RU33 542 aa11.28□□□□□ -0.6
LINC00535-204ENST00000520513 J3QL48 77 aa11.28□□□□□ -0.6
LINC00535-204ENST00000520513 SMPD1P17405 629 aa11.28□□□□□ -0.6
LINC00535-204ENST00000520513 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
LINC00535-204ENST00000520513 LYPD8Q6UX82 237 aa11.28□□□□□ -0.6
LINC00535-204ENST00000520513 UNC93B1Q9H1C4 597 aa11.28□□□□□ -0.6
LINC00535-204ENST00000520513 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
LINC00535-204ENST00000520513 PLEKHG3A1L390 1219 aa11.27□□□□□ -0.61
LINC00535-204ENST00000520513 WNT7BP56706 349 aa11.27□□□□□ -0.61
LINC00535-204ENST00000520513 SH3BP2P78314 561 aa11.27□□□□□ -0.61
LINC00535-204ENST00000520513 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
LINC00535-204ENST00000520513 TUSC1Q2TAM9 212 aa11.27□□□□□ -0.61
LINC00535-204ENST00000520513 AAASQ9NRG9 546 aa11.27□□□□□ -0.61
LINC00535-204ENST00000520513 DACH1Q9UI36 760 aa11.27□□□□□ -0.61
LINC00535-204ENST00000520513 AVPP01185 164 aa11.26□□□□□ -0.61
LINC00535-204ENST00000520513 F12P00748 615 aaPredicted RBP11.25□□□□□ -0.61
LINC00535-204ENST00000520513 CLK2P49760 499 aaKnown RBP11.25□□□□□ -0.61
LINC00535-204ENST00000520513 LINC01559Q495D7 138 aa11.25□□□□□ -0.61
LINC00535-204ENST00000520513 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
LINC00535-204ENST00000520513 MAP10Q9P2G4 905 aa11.25□□□□□ -0.61
LINC00535-204ENST00000520513 TTC24A2A3L6 582 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms