RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 CCDC144AA2RUR9 1427 aa29.96■■■□□ 2.39
HDAC2-207ENST00000520170 ESCO1Q5FWF5 840 aa29.95■■■□□ 2.39
HDAC2-207ENST00000520170 RGS12O14924 1447 aa29.95■■■□□ 2.38
HDAC2-207ENST00000520170 MPHOSPH9Q99550 1183 aa29.92■■■□□ 2.38
HDAC2-207ENST00000520170 CDC42BPGQ6DT37 1551 aa29.9■■■□□ 2.38
HDAC2-207ENST00000520170 WAPLQ7Z5K2 1190 aa29.9■■■□□ 2.38
HDAC2-207ENST00000520170 USP21Q9UK80 565 aa29.9■■■□□ 2.38
HDAC2-207ENST00000520170 IFT172Q9UG01 1749 aa29.9■■■□□ 2.38
HDAC2-207ENST00000520170 NPHP3Q7Z494 1330 aa29.89■■■□□ 2.38
HDAC2-207ENST00000520170 SPATA31E1Q6ZUB1 1445 aa29.88■■■□□ 2.37
HDAC2-207ENST00000520170 NUTM2FA1L443 756 aa29.88■■■□□ 2.37
HDAC2-207ENST00000520170 ANKRD30BQ9BXX2 1392 aa29.88■■■□□ 2.37
HDAC2-207ENST00000520170 COL22A1Q8NFW1 1626 aaPredicted RBP29.87■■■□□ 2.37
HDAC2-207ENST00000520170 XPCQ01831 940 aaPredicted RBP29.87■■■□□ 2.37
HDAC2-207ENST00000520170 TMEM132EQ6IEE7 984 aa29.87■■■□□ 2.37
HDAC2-207ENST00000520170 FOXO3O43524 673 aa29.86■■■□□ 2.37
HDAC2-207ENST00000520170 LRPPRCP42704 1394 aaKnown RBP29.85■■■□□ 2.37
HDAC2-207ENST00000520170 FNBP4Q8N3X1 1017 aaPredicted RBP29.84■■■□□ 2.37
HDAC2-207ENST00000520170 TRPC5Q9UL62 973 aaPredicted RBP29.84■■■□□ 2.37
HDAC2-207ENST00000520170 TECPR2O15040 1411 aa29.83■■■□□ 2.37
HDAC2-207ENST00000520170 PXDNQ92626 1479 aa29.82■■■□□ 2.36
HDAC2-207ENST00000520170 ABCC11Q96J66 1382 aa29.81■■■□□ 2.36
HDAC2-207ENST00000520170 PLEKHH1Q9ULM0 1364 aa29.81■■■□□ 2.36
HDAC2-207ENST00000520170 KNDC1Q76NI1 1749 aa29.81■■■□□ 2.36
HDAC2-207ENST00000520170 MYOM2P54296 1465 aa29.8■■■□□ 2.36
HDAC2-207ENST00000520170 MARF1Q9Y4F3 1742 aaKnown RBP29.79■■■□□ 2.36
HDAC2-207ENST00000520170 PIK3C2GO75747 1445 aa29.79■■■□□ 2.36
HDAC2-207ENST00000520170 ATRNO75882 1429 aa29.76■■■□□ 2.35
HDAC2-207ENST00000520170 YTHDC2Q9H6S0 1430 aaKnown RBP29.76■■■□□ 2.35
HDAC2-207ENST00000520170 FMN2Q9NZ56 1722 aa29.76■■■□□ 2.35
HDAC2-207ENST00000520170 ATAD2Q6PL18 1390 aa29.75■■■□□ 2.35
HDAC2-207ENST00000520170 RGPD8O14715 1765 aaPredicted RBP29.72■■■□□ 2.35
HDAC2-207ENST00000520170 BCL9LQ86UU0 1499 aa29.71■■■□□ 2.35
HDAC2-207ENST00000520170 C14orf93Q9H972 538 aaKnown RBP29.7■■■□□ 2.35
HDAC2-207ENST00000520170 KIF1AQ12756 1690 aa29.69■■■□□ 2.34
HDAC2-207ENST00000520170 CFAP70Q5T0N1 1121 aa29.68■■■□□ 2.34
HDAC2-207ENST00000520170 KRT28Q7Z3Y7 464 aa29.68■■■□□ 2.34
HDAC2-207ENST00000520170 SIRT1Q96EB6 747 aa29.68■■■□□ 2.34
HDAC2-207ENST00000520170 SPATA31A3Q5VYP0 1347 aa29.68■■■□□ 2.34
HDAC2-207ENST00000520170 ACIN1Q9UKV3 1341 aaKnown RBP29.66■■■□□ 2.34
HDAC2-207ENST00000520170 EP400Q96L91 3159 aa29.66■■■□□ 2.34
HDAC2-207ENST00000520170 DHX57Q6P158 1386 aaKnown RBP29.65■■■□□ 2.34
HDAC2-207ENST00000520170 GJD4Q96KN9 370 aaPredicted RBP29.65■■■□□ 2.34
HDAC2-207ENST00000520170 SAFB2Q14151 953 aaKnown RBP eCLIP29.64■■■□□ 2.34
HDAC2-207ENST00000520170 PHF8Q9UPP1 1060 aa29.63■■■□□ 2.33
HDAC2-207ENST00000520170 NRXN1Q9ULB1 1477 aa29.62■■■□□ 2.33
HDAC2-207ENST00000520170 PRAM1Q96QH2 718 aa29.61■■■□□ 2.33
HDAC2-207ENST00000520170 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.61■■■□□ 2.33
HDAC2-207ENST00000520170 PLEKHG5O94827 1062 aa29.6■■■□□ 2.33
HDAC2-207ENST00000520170 UNC5CLQ8IV45 518 aa29.6■■■□□ 2.33
HDAC2-207ENST00000520170 HAP1P54257 671 aaPredicted RBP29.59■■■□□ 2.33
HDAC2-207ENST00000520170 PSME1Q06323 249 aa29.59■■■□□ 2.33
HDAC2-207ENST00000520170 USP32Q8NFA0 1604 aa29.57■■■□□ 2.32
HDAC2-207ENST00000520170 CABLES1Q8TDN4 633 aa29.57■■■□□ 2.32
HDAC2-207ENST00000520170 POGKQ9P215 609 aa29.57■■■□□ 2.32
HDAC2-207ENST00000520170 SLIT2O94813 1529 aa29.56■■■□□ 2.32
HDAC2-207ENST00000520170 LMOD2Q6P5Q4 547 aa29.56■■■□□ 2.32
HDAC2-207ENST00000520170 TNS3Q68CZ2 1445 aa29.55■■■□□ 2.32
HDAC2-207ENST00000520170 RAB3GAP2Q9H2M9 1393 aa29.54■■■□□ 2.32
HDAC2-207ENST00000520170 SRCAPQ6ZRS2 3230 aa29.54■■■□□ 2.32
HDAC2-207ENST00000520170 RALGAPBQ86X10 1494 aa29.54■■■□□ 2.32
HDAC2-207ENST00000520170 GLI3P10071 1580 aa29.53■■■□□ 2.32
HDAC2-207ENST00000520170 CCDC125Q86Z20 511 aa29.52■■■□□ 2.32
HDAC2-207ENST00000520170 PMFBP1Q8TBY8 1022 aa29.52■■■□□ 2.32
HDAC2-207ENST00000520170 BRWD3Q6RI45 1802 aa29.5■■■□□ 2.31
HDAC2-207ENST00000520170 ZRANB1Q9UGI0 708 aa29.5■■■□□ 2.31
HDAC2-207ENST00000520170 SBNO1A3KN83 1393 aa29.5■■■□□ 2.31
HDAC2-207ENST00000520170 DLC1Q96QB1 1528 aa29.5■■■□□ 2.31
HDAC2-207ENST00000520170 TRAK1Q9UPV9 953 aa29.49■■■□□ 2.31
HDAC2-207ENST00000520170 KDM2AQ9Y2K7 1162 aa29.48■■■□□ 2.31
HDAC2-207ENST00000520170 HIRIP3Q9BW71 556 aaPredicted RBP29.47■■■□□ 2.31
HDAC2-207ENST00000520170 ABCA3Q99758 1704 aa29.47■■■□□ 2.31
HDAC2-207ENST00000520170 PLCH1Q4KWH8 1693 aa29.47■■■□□ 2.31
HDAC2-207ENST00000520170 CCDC9Q9Y3X0 531 aaKnown RBP29.46■■■□□ 2.31
HDAC2-207ENST00000520170 ARHGEF10O15013 1369 aa29.46■■■□□ 2.31
HDAC2-207ENST00000520170 ANKARQ7Z5J8 1434 aa29.45■■■□□ 2.31
HDAC2-207ENST00000520170 NWD2Q9ULI1 1742 aa29.45■■■□□ 2.3
HDAC2-207ENST00000520170 ADGRB1O14514 1584 aa29.44■■■□□ 2.3
HDAC2-207ENST00000520170 VPS72Q15906 364 aa29.44■■■□□ 2.3
HDAC2-207ENST00000520170 DCAF11Q8TEB1 546 aa29.44■■■□□ 2.3
HDAC2-207ENST00000520170 MINK1Q8N4C8 1332 aaPredicted RBP29.44■■■□□ 2.3
HDAC2-207ENST00000520170 ADGRB2O60241 1585 aa29.43■■■□□ 2.3
HDAC2-207ENST00000520170 SEPT12Q8IYM1 358 aa29.43■■■□□ 2.3
HDAC2-207ENST00000520170 FAM83GA6ND36 823 aa29.4■■■□□ 2.3
HDAC2-207ENST00000520170 TRPM3Q9HCF6 1732 aaPredicted RBP29.39■■■□□ 2.3
HDAC2-207ENST00000520170 BLMP54132 1417 aaPredicted RBP29.38■■■□□ 2.29
HDAC2-207ENST00000520170 GPRASP1Q5JY77 1395 aa29.38■■■□□ 2.29
HDAC2-207ENST00000520170 PRR36Q9H6K5 1346 aa29.37■■■□□ 2.29
HDAC2-207ENST00000520170 EIF3AQ14152 1382 aaKnown RBP29.36■■■□□ 2.29
HDAC2-207ENST00000520170 WASLO00401 505 aaPredicted RBP29.35■■■□□ 2.29
HDAC2-207ENST00000520170 ONECUT3O60422 494 aaPredicted RBP29.34■■■□□ 2.29
HDAC2-207ENST00000520170 SF3B2Q13435 895 aaKnown RBP29.34■■■□□ 2.29
HDAC2-207ENST00000520170 DEFB132Q7Z7B7 95 aa29.34■■■□□ 2.29
HDAC2-207ENST00000520170 TULP4Q9NRJ4 1543 aa29.34■■■□□ 2.29
HDAC2-207ENST00000520170 ALS2Q96Q42 1657 aa29.34■■■□□ 2.29
HDAC2-207ENST00000520170 A0A0G2JS52 829 aa29.33■■■□□ 2.29
HDAC2-207ENST00000520170 MYT1Q01538 1121 aa29.33■■■□□ 2.29
HDAC2-207ENST00000520170 KRT27Q7Z3Y8 459 aa29.32■■■□□ 2.28
HDAC2-207ENST00000520170 NGDNQ8NEJ9 315 aaKnown RBP29.32■■■□□ 2.28
HDAC2-207ENST00000520170 BTG4Q9NY30 223 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms