RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 NUTM2EB1AL46 878 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC9-206ENST00000519482 NUTM2AQ8IVF1 878 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC9-206ENST00000519482 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
TRAPPC9-206ENST00000519482 PNPLA6Q8IY17 1366 aa18.37■□□□□ 0.53
TRAPPC9-206ENST00000519482 SOS2Q07890 1332 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC9-206ENST00000519482 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC9-206ENST00000519482 STK26Q9P289 416 aa18.36■□□□□ 0.53
TRAPPC9-206ENST00000519482 YTHDC2Q9H6S0 1430 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-206ENST00000519482 TMEM132EQ6IEE7 984 aa18.35■□□□□ 0.53
TRAPPC9-206ENST00000519482 C14orf93Q9H972 538 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-206ENST00000519482 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
TRAPPC9-206ENST00000519482 SIRT1Q96EB6 747 aa18.34■□□□□ 0.53
TRAPPC9-206ENST00000519482 FMN2Q9NZ56 1722 aa18.33■□□□□ 0.52
TRAPPC9-206ENST00000519482 HRCP23327 699 aa18.33■□□□□ 0.52
TRAPPC9-206ENST00000519482 COL22A1Q8NFW1 1626 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC9-206ENST00000519482 AFF2P51816 1311 aa18.31■□□□□ 0.52
TRAPPC9-206ENST00000519482 NPHP3Q7Z494 1330 aa18.31■□□□□ 0.52
TRAPPC9-206ENST00000519482 ESCO1Q5FWF5 840 aa18.31■□□□□ 0.52
TRAPPC9-206ENST00000519482 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
TRAPPC9-206ENST00000519482 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
TRAPPC9-206ENST00000519482 KIF1AQ12756 1690 aa18.29■□□□□ 0.52
TRAPPC9-206ENST00000519482 RXRBP28702 533 aa18.29■□□□□ 0.52
TRAPPC9-206ENST00000519482 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
TRAPPC9-206ENST00000519482 PXDNQ92626 1479 aa18.28■□□□□ 0.52
TRAPPC9-206ENST00000519482 CDK12Q9NYV4 1490 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC9-206ENST00000519482 PCGF6Q9BYE7 350 aa18.28■□□□□ 0.52
TRAPPC9-206ENST00000519482 C8orf37Q96NL8 207 aa18.27■□□□□ 0.52
TRAPPC9-206ENST00000519482 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC9-206ENST00000519482 DLC1Q96QB1 1528 aa18.26■□□□□ 0.51
TRAPPC9-206ENST00000519482 MARF1Q9Y4F3 1742 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-206ENST00000519482 STAC3Q96MF2 364 aa18.25■□□□□ 0.51
TRAPPC9-206ENST00000519482 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
TRAPPC9-206ENST00000519482 FOXO3O43524 673 aa18.24■□□□□ 0.51
TRAPPC9-206ENST00000519482 NGLY1Q96IV0 654 aa18.24■□□□□ 0.51
TRAPPC9-206ENST00000519482 ADGRB1O14514 1584 aa18.24■□□□□ 0.51
TRAPPC9-206ENST00000519482 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
TRAPPC9-206ENST00000519482 QTRT2Q9H974 415 aaKnown RBP18.22■□□□□ 0.51
TRAPPC9-206ENST00000519482 RBM6P78332 1123 aaKnown RBP18.21■□□□□ 0.51
TRAPPC9-206ENST00000519482 DCAF11Q8TEB1 546 aa18.21■□□□□ 0.51
TRAPPC9-206ENST00000519482 PRAM1Q96QH2 718 aa18.21■□□□□ 0.51
TRAPPC9-206ENST00000519482 ADGRB2O60241 1585 aa18.21■□□□□ 0.51
TRAPPC9-206ENST00000519482 XPCQ01831 940 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC9-206ENST00000519482 FNBP4Q8N3X1 1017 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC9-206ENST00000519482 POGKQ9P215 609 aa18.19■□□□□ 0.5
TRAPPC9-206ENST00000519482 KDM2AQ9Y2K7 1162 aa18.19■□□□□ 0.5
TRAPPC9-206ENST00000519482 USP21Q9UK80 565 aa18.18■□□□□ 0.5
TRAPPC9-206ENST00000519482 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
TRAPPC9-206ENST00000519482 USP32Q8NFA0 1604 aa18.17■□□□□ 0.5
TRAPPC9-206ENST00000519482 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRAPPC9-206ENST00000519482 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
TRAPPC9-206ENST00000519482 RGS12O14924 1447 aa18.16■□□□□ 0.5
TRAPPC9-206ENST00000519482 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
TRAPPC9-206ENST00000519482 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
TRAPPC9-206ENST00000519482 UPF1Q92900 1129 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRAPPC9-206ENST00000519482 PSME1Q06323 249 aa18.15■□□□□ 0.5
TRAPPC9-206ENST00000519482 TRPC5Q9UL62 973 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC9-206ENST00000519482 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
TRAPPC9-206ENST00000519482 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.15■□□□□ 0.5
TRAPPC9-206ENST00000519482 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-206ENST00000519482 KIAA1210Q9ULL0 1709 aa18.14■□□□□ 0.49
TRAPPC9-206ENST00000519482 ATRNO75882 1429 aa18.14■□□□□ 0.49
TRAPPC9-206ENST00000519482 EIF3AQ14152 1382 aaKnown RBP18.13■□□□□ 0.49
TRAPPC9-206ENST00000519482 TNS3Q68CZ2 1445 aa18.13■□□□□ 0.49
TRAPPC9-206ENST00000519482 SBNO1A3KN83 1393 aa18.12■□□□□ 0.49
TRAPPC9-206ENST00000519482 BCL9LQ86UU0 1499 aa18.12■□□□□ 0.49
TRAPPC9-206ENST00000519482 TULP4Q9NRJ4 1543 aa18.11■□□□□ 0.49
TRAPPC9-206ENST00000519482 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
TRAPPC9-206ENST00000519482 MINK1Q8N4C8 1332 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-206ENST00000519482 HIRIP3Q9BW71 556 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-206ENST00000519482 ITSN1Q15811 1721 aa18.09■□□□□ 0.49
TRAPPC9-206ENST00000519482 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-206ENST00000519482 ARHGEF10O15013 1369 aa18.08■□□□□ 0.49
TRAPPC9-206ENST00000519482 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC9-206ENST00000519482 SLIT2O94813 1529 aa18.08■□□□□ 0.48
TRAPPC9-206ENST00000519482 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
TRAPPC9-206ENST00000519482 NWD2Q9ULI1 1742 aa18.06■□□□□ 0.48
TRAPPC9-206ENST00000519482 ALS2Q96Q42 1657 aa18.06■□□□□ 0.48
TRAPPC9-206ENST00000519482 PLCH1Q4KWH8 1693 aa18.06■□□□□ 0.48
TRAPPC9-206ENST00000519482 PRR36Q9H6K5 1346 aa18.05■□□□□ 0.48
TRAPPC9-206ENST00000519482 HAP1P54257 671 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC9-206ENST00000519482 UNC5CLQ8IV45 518 aa18.05■□□□□ 0.48
TRAPPC9-206ENST00000519482 GJD4Q96KN9 370 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC9-206ENST00000519482 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
TRAPPC9-206ENST00000519482 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
TRAPPC9-206ENST00000519482 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
TRAPPC9-206ENST00000519482 GLI3P10071 1580 aa18.02■□□□□ 0.48
TRAPPC9-206ENST00000519482 CABLES1Q8TDN4 633 aa18.02■□□□□ 0.48
TRAPPC9-206ENST00000519482 ATP7BP35670 1465 aa18.01■□□□□ 0.47
TRAPPC9-206ENST00000519482 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
TRAPPC9-206ENST00000519482 CRYBG1Q9Y4K1 1723 aa18■□□□□ 0.47
TRAPPC9-206ENST00000519482 RALGAPBQ86X10 1494 aa18■□□□□ 0.47
TRAPPC9-206ENST00000519482 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
TRAPPC9-206ENST00000519482 NUDT16Q96DE0 195 aaKnown RBP17.99■□□□□ 0.47
TRAPPC9-206ENST00000519482 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
TRAPPC9-206ENST00000519482 COL14A1Q05707 1796 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-206ENST00000519482 VPS72Q15906 364 aa17.97■□□□□ 0.47
TRAPPC9-206ENST00000519482 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
TRAPPC9-206ENST00000519482 CDK19Q9BWU1 502 aa17.97■□□□□ 0.47
TRAPPC9-206ENST00000519482 NRAPQ86VF7 1730 aa17.96■□□□□ 0.47
TRAPPC9-206ENST00000519482 PLEKHG5O94827 1062 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms