RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 ROBO2Q9HCK4 1378 aa20.63■□□□□ 0.89
PABPC1-210ENST00000519363 MIER1Q8N108 512 aa20.63■□□□□ 0.89
PABPC1-210ENST00000519363 PLEKHH1Q9ULM0 1364 aa20.62■□□□□ 0.89
PABPC1-210ENST00000519363 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
PABPC1-210ENST00000519363 NINLQ9Y2I6 1382 aa20.59■□□□□ 0.89
PABPC1-210ENST00000519363 ANP32CO43423 234 aa20.59■□□□□ 0.89
PABPC1-210ENST00000519363 ATAD2Q6PL18 1390 aa20.58■□□□□ 0.88
PABPC1-210ENST00000519363 STRCQ7RTU9 1775 aa20.57■□□□□ 0.88
PABPC1-210ENST00000519363 SAFB2Q14151 953 aaKnown RBP eCLIP20.57■□□□□ 0.88
PABPC1-210ENST00000519363 AMOTL2Q9Y2J4 779 aa20.57■□□□□ 0.88
PABPC1-210ENST00000519363 MINK1Q8N4C8 1332 aaPredicted RBP20.56■□□□□ 0.88
PABPC1-210ENST00000519363 WAPLQ7Z5K2 1190 aa20.56■□□□□ 0.88
PABPC1-210ENST00000519363 NCKAP5LQ9HCH0 1330 aa20.55■□□□□ 0.88
PABPC1-210ENST00000519363 USP32Q8NFA0 1604 aa20.55■□□□□ 0.88
PABPC1-210ENST00000519363 KTN1Q86UP2 1357 aaKnown RBP20.53■□□□□ 0.88
PABPC1-210ENST00000519363 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
PABPC1-210ENST00000519363 TOPAZ1Q8N9V7 1692 aa20.53■□□□□ 0.88
PABPC1-210ENST00000519363 PER1O15534 1290 aaPredicted RBP20.52■□□□□ 0.88
PABPC1-210ENST00000519363 PANK3Q9H999 370 aa20.52■□□□□ 0.88
PABPC1-210ENST00000519363 NALCNQ8IZF0 1738 aa20.52■□□□□ 0.88
PABPC1-210ENST00000519363 CDC42BPGQ6DT37 1551 aa20.51■□□□□ 0.87
PABPC1-210ENST00000519363 WASLO00401 505 aaPredicted RBP20.5■□□□□ 0.87
PABPC1-210ENST00000519363 PRKRIP1Q9H875 184 aaPredicted RBP20.5■□□□□ 0.87
PABPC1-210ENST00000519363 ITSN1Q15811 1721 aa20.5■□□□□ 0.87
PABPC1-210ENST00000519363 ATP7BP35670 1465 aa20.5■□□□□ 0.87
PABPC1-210ENST00000519363 NPC1L1Q9UHC9 1359 aa20.49■□□□□ 0.87
PABPC1-210ENST00000519363 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
PABPC1-210ENST00000519363 KCNA6P17658 529 aa20.49■□□□□ 0.87
PABPC1-210ENST00000519363 SRPK2P78362 688 aaKnown RBP20.49■□□□□ 0.87
PABPC1-210ENST00000519363 CDK19Q9BWU1 502 aa20.49■□□□□ 0.87
PABPC1-210ENST00000519363 CABP2Q9NPB3 220 aa20.49■□□□□ 0.87
PABPC1-210ENST00000519363 FMN2Q9NZ56 1722 aa20.49■□□□□ 0.87
PABPC1-210ENST00000519363 ANKRD36BQ8N2N9 1353 aa20.48■□□□□ 0.87
PABPC1-210ENST00000519363 HSPA2P54652 639 aa20.48■□□□□ 0.87
PABPC1-210ENST00000519363 STRCP1A6NGW2 1772 aa20.46■□□□□ 0.87
PABPC1-210ENST00000519363 AKAP12Q02952 1782 aa20.45■□□□□ 0.86
PABPC1-210ENST00000519363 PARD3Q8TEW0 1356 aa20.45■□□□□ 0.86
PABPC1-210ENST00000519363 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
PABPC1-210ENST00000519363 CD163L1Q9NR16 1453 aa20.44■□□□□ 0.86
PABPC1-210ENST00000519363 MON2Q7Z3U7 1717 aa20.44■□□□□ 0.86
PABPC1-210ENST00000519363 KNSTRNQ9Y448 316 aa20.43■□□□□ 0.86
PABPC1-210ENST00000519363 ANKARQ7Z5J8 1434 aa20.43■□□□□ 0.86
PABPC1-210ENST00000519363 RALBP1Q15311 655 aa20.42■□□□□ 0.86
PABPC1-210ENST00000519363 TMC1Q8TDI8 760 aa20.42■□□□□ 0.86
PABPC1-210ENST00000519363 SLC12A5Q9H2X9 1139 aa20.42■□□□□ 0.86
PABPC1-210ENST00000519363 NSD3Q9BZ95 1437 aa20.42■□□□□ 0.86
PABPC1-210ENST00000519363 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
PABPC1-210ENST00000519363 A0A1W2PP64 1363 aa20.41■□□□□ 0.86
PABPC1-210ENST00000519363 ANKRD26Q9UPS8 1709 aa20.41■□□□□ 0.86
PABPC1-210ENST00000519363 PPIP5K1Q6PFW1 1433 aa20.4■□□□□ 0.86
PABPC1-210ENST00000519363 KIF20BQ96Q89 1820 aa20.39■□□□□ 0.86
PABPC1-210ENST00000519363 NCOA3Q9Y6Q9 1424 aa20.39■□□□□ 0.85
PABPC1-210ENST00000519363 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.85
PABPC1-210ENST00000519363 TERF2IPQ9NYB0 399 aa20.39■□□□□ 0.85
PABPC1-210ENST00000519363 CPSF1Q10570 1443 aaKnown RBP20.38■□□□□ 0.85
PABPC1-210ENST00000519363 NSD2O96028 1365 aa20.38■□□□□ 0.85
PABPC1-210ENST00000519363 PRR36Q9H6K5 1346 aa20.38■□□□□ 0.85
PABPC1-210ENST00000519363 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
PABPC1-210ENST00000519363 CCDC61Q9Y6R9 512 aa20.38■□□□□ 0.85
PABPC1-210ENST00000519363 RGPD8O14715 1765 aaPredicted RBP20.38■□□□□ 0.85
PABPC1-210ENST00000519363 NRKQ7Z2Y5 1582 aa20.37■□□□□ 0.85
PABPC1-210ENST00000519363 MYBBP1AQ9BQG0 1328 aaKnown RBP20.35■□□□□ 0.85
PABPC1-210ENST00000519363 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
PABPC1-210ENST00000519363 CABP1Q9NZU7 370 aa20.34■□□□□ 0.85
PABPC1-210ENST00000519363 XIRP1Q702N8 1843 aaKnown RBP20.34■□□□□ 0.85
PABPC1-210ENST00000519363 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.85
PABPC1-210ENST00000519363 DCCP43146 1447 aa20.33■□□□□ 0.84
PABPC1-210ENST00000519363 EDC4Q6P2E9 1401 aaKnown RBP20.33■□□□□ 0.84
PABPC1-210ENST00000519363 PLEKHG3A1L390 1219 aa20.32■□□□□ 0.84
PABPC1-210ENST00000519363 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
PABPC1-210ENST00000519363 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
PABPC1-210ENST00000519363 PROSER2Q86WR7 435 aaPredicted RBP20.3■□□□□ 0.84
PABPC1-210ENST00000519363 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
PABPC1-210ENST00000519363 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
PABPC1-210ENST00000519363 POLR3AO14802 1390 aaPredicted RBP20.29■□□□□ 0.84
PABPC1-210ENST00000519363 TMEM94Q12767 1356 aa20.28■□□□□ 0.84
PABPC1-210ENST00000519363 KIF1AQ12756 1690 aa20.27■□□□□ 0.84
PABPC1-210ENST00000519363 ZNF692Q9BU19 519 aaPredicted RBP20.27■□□□□ 0.84
PABPC1-210ENST00000519363 LRRC7Q96NW7 1537 aa20.26■□□□□ 0.83
PABPC1-210ENST00000519363 USP6P35125 1406 aa20.26■□□□□ 0.83
PABPC1-210ENST00000519363 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
PABPC1-210ENST00000519363 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
PABPC1-210ENST00000519363 C19orf44Q9H6X5 657 aa20.24■□□□□ 0.83
PABPC1-210ENST00000519363 SSH2Q76I76 1423 aa20.24■□□□□ 0.83
PABPC1-210ENST00000519363 USP54Q70EL1 1684 aa20.23■□□□□ 0.83
PABPC1-210ENST00000519363 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
PABPC1-210ENST00000519363 ACEP12821 1306 aa20.23■□□□□ 0.83
PABPC1-210ENST00000519363 PPP2R1AP30153 589 aa20.22■□□□□ 0.83
PABPC1-210ENST00000519363 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
PABPC1-210ENST00000519363 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
PABPC1-210ENST00000519363 ZNF335Q9H4Z2 1342 aaPredicted RBP20.21■□□□□ 0.83
PABPC1-210ENST00000519363 MST1RQ04912 1400 aa20.2■□□□□ 0.82
PABPC1-210ENST00000519363 NUTM2FA1L443 756 aa20.2■□□□□ 0.82
PABPC1-210ENST00000519363 C1orf167Q5SNV9 1468 aa20.19■□□□□ 0.82
PABPC1-210ENST00000519363 FYB1O15117 783 aa20.19■□□□□ 0.82
PABPC1-210ENST00000519363 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
PABPC1-210ENST00000519363 MSH6P52701 1360 aa20.19■□□□□ 0.82
PABPC1-210ENST00000519363 PIK3C2AO00443 1686 aa20.18■□□□□ 0.82
PABPC1-210ENST00000519363 PHF8Q9UPP1 1060 aa20.17■□□□□ 0.82
PABPC1-210ENST00000519363 TTC21BQ7Z4L5 1316 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms