RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
UBLCP1-202ENST00000519276 TRIM32Q13049 653 aa12.35□□□□□ -0.43
UBLCP1-202ENST00000519276 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
UBLCP1-202ENST00000519276 DAXXQ9UER7 740 aaPredicted RBP12.35□□□□□ -0.43
UBLCP1-202ENST00000519276 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
UBLCP1-202ENST00000519276 ZSCAN1Q8NBB4 408 aa12.34□□□□□ -0.43
UBLCP1-202ENST00000519276 SUZ12Q15022 739 aaKnown RBP12.33□□□□□ -0.44
UBLCP1-202ENST00000519276 HPS1Q92902 700 aa12.33□□□□□ -0.44
UBLCP1-202ENST00000519276 NXF1Q9UBU9 619 aaKnown RBP12.32□□□□□ -0.44
UBLCP1-202ENST00000519276 NPAS3Q8IXF0 933 aa12.31□□□□□ -0.44
UBLCP1-202ENST00000519276 LORP23490 312 aaPredicted RBP12.3□□□□□ -0.44
UBLCP1-202ENST00000519276 GCGRP47871 477 aa12.3□□□□□ -0.44
UBLCP1-202ENST00000519276 FECHP22830 423 aa12.3□□□□□ -0.44
UBLCP1-202ENST00000519276 GMPRP36959 345 aa12.29□□□□□ -0.44
UBLCP1-202ENST00000519276 HIC1Q14526 733 aa12.29□□□□□ -0.44
UBLCP1-202ENST00000519276 IRF7Q92985 503 aa12.29□□□□□ -0.44
UBLCP1-202ENST00000519276 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
UBLCP1-202ENST00000519276 MMP16P51512 607 aa12.27□□□□□ -0.44
UBLCP1-202ENST00000519276 KCNV2Q8TDN2 545 aa12.27□□□□□ -0.44
UBLCP1-202ENST00000519276 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
UBLCP1-202ENST00000519276 RNF19BQ6ZMZ0 732 aa12.26□□□□□ -0.45
UBLCP1-202ENST00000519276 SULF1Q8IWU6 871 aa12.26□□□□□ -0.45
UBLCP1-202ENST00000519276 Q3C1V9 767 aa12.24□□□□□ -0.45
UBLCP1-202ENST00000519276 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
UBLCP1-202ENST00000519276 WNT7BP56706 349 aa12.21□□□□□ -0.46
UBLCP1-202ENST00000519276 H3BM21 787 aa12.19□□□□□ -0.46
UBLCP1-202ENST00000519276 DXOO77932 396 aaKnown RBP12.18□□□□□ -0.46
UBLCP1-202ENST00000519276 SKOR1P84550 965 aa12.17□□□□□ -0.46
UBLCP1-202ENST00000519276 GNPATO15228 680 aa12.16□□□□□ -0.46
UBLCP1-202ENST00000519276 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
UBLCP1-202ENST00000519276 TRIM46Q7Z4K8 759 aa12.14□□□□□ -0.47
UBLCP1-202ENST00000519276 USB1Q9BQ65 265 aaKnown RBP12.14□□□□□ -0.47
UBLCP1-202ENST00000519276 VEGFBP49765 207 aa12.12□□□□□ -0.47
UBLCP1-202ENST00000519276 CCDC24Q8N4L8 307 aa12.12□□□□□ -0.47
UBLCP1-202ENST00000519276 NLRP7Q8WX94 980 aa12.12□□□□□ -0.47
UBLCP1-202ENST00000519276 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
UBLCP1-202ENST00000519276 SEMA3EO15041 775 aa12.11□□□□□ -0.47
UBLCP1-202ENST00000519276 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
UBLCP1-202ENST00000519276 BMP1P13497 986 aa12.1□□□□□ -0.47
UBLCP1-202ENST00000519276 SIAH2O43255 324 aa12.08□□□□□ -0.48
UBLCP1-202ENST00000519276 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
UBLCP1-202ENST00000519276 WASF2Q9Y6W5 498 aa12.07□□□□□ -0.48
UBLCP1-202ENST00000519276 PHOX2BQ99453 314 aa12.06□□□□□ -0.48
UBLCP1-202ENST00000519276 GPR37O15354 613 aa12.04□□□□□ -0.48
UBLCP1-202ENST00000519276 KCNMA1Q12791 1236 aa12.04□□□□□ -0.48
UBLCP1-202ENST00000519276 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
UBLCP1-202ENST00000519276 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
UBLCP1-202ENST00000519276 CD46P15529 392 aa12.02□□□□□ -0.49
UBLCP1-202ENST00000519276 SMYD5Q6GMV2 418 aa12.01□□□□□ -0.49
UBLCP1-202ENST00000519276 ZFP42Q96MM3 310 aa12.01□□□□□ -0.49
UBLCP1-202ENST00000519276 KDM4AO75164 1064 aa12.01□□□□□ -0.49
UBLCP1-202ENST00000519276 VSIG8P0DPA2 414 aa12.01□□□□□ -0.49
UBLCP1-202ENST00000519276 USP46P62068 366 aa12□□□□□ -0.49
UBLCP1-202ENST00000519276 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
UBLCP1-202ENST00000519276 JUNDP17535 347 aa11.99□□□□□ -0.49
UBLCP1-202ENST00000519276 TESPA1A2RU30 521 aaPredicted RBP11.97□□□□□ -0.49
UBLCP1-202ENST00000519276 KCTD17Q8N5Z5 321 aa11.96□□□□□ -0.49
UBLCP1-202ENST00000519276 GSK3AP49840 483 aa11.94□□□□□ -0.5
UBLCP1-202ENST00000519276 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
UBLCP1-202ENST00000519276 SCARF1Q14162 830 aa11.93□□□□□ -0.5
UBLCP1-202ENST00000519276 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
UBLCP1-202ENST00000519276 NUDT12Q9BQG2 462 aa11.93□□□□□ -0.5
UBLCP1-202ENST00000519276 MRPL14Q6P1L8 145 aaKnown RBP11.92□□□□□ -0.5
UBLCP1-202ENST00000519276 HLA-CQ95604 372 aa11.92□□□□□ -0.5
UBLCP1-202ENST00000519276 HOXA2O43364 376 aa11.91□□□□□ -0.5
UBLCP1-202ENST00000519276 SH3BP2P78314 561 aa11.91□□□□□ -0.5
UBLCP1-202ENST00000519276 TMEM151AQ8N4L1 468 aa11.9□□□□□ -0.5
UBLCP1-202ENST00000519276 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
UBLCP1-202ENST00000519276 MPNDQ8N594 471 aa11.88□□□□□ -0.51
UBLCP1-202ENST00000519276 RETREG3Q86VR2 466 aa11.87□□□□□ -0.51
UBLCP1-202ENST00000519276 PURBQ96QR8 312 aaKnown RBP11.87□□□□□ -0.51
UBLCP1-202ENST00000519276 GDF11O95390 407 aa11.85□□□□□ -0.51
UBLCP1-202ENST00000519276 NNTQ13423 1086 aa11.85□□□□□ -0.51
UBLCP1-202ENST00000519276 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
UBLCP1-202ENST00000519276 RASSF7Q02833 373 aa11.84□□□□□ -0.51
UBLCP1-202ENST00000519276 SYMPKQ92797 1274 aaKnown RBP11.84□□□□□ -0.51
UBLCP1-202ENST00000519276 TLL2Q9Y6L7 1015 aa11.84□□□□□ -0.51
UBLCP1-202ENST00000519276 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
UBLCP1-202ENST00000519276 RNF225M0QZC1 329 aaPredicted RBP11.83□□□□□ -0.52
UBLCP1-202ENST00000519276 CCNYL3P0C7X3 344 aa11.83□□□□□ -0.52
UBLCP1-202ENST00000519276 TIMP2P16035 220 aa11.83□□□□□ -0.52
UBLCP1-202ENST00000519276 ADH1CP00326 375 aa11.82□□□□□ -0.52
UBLCP1-202ENST00000519276 VARSP26640 1264 aaKnown RBP11.82□□□□□ -0.52
UBLCP1-202ENST00000519276 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
UBLCP1-202ENST00000519276 WDR4P57081 412 aaKnown RBP11.8□□□□□ -0.52
UBLCP1-202ENST00000519276 MS4A1P11836 297 aa11.79□□□□□ -0.52
UBLCP1-202ENST00000519276 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
UBLCP1-202ENST00000519276 UNC93B1Q9H1C4 597 aa11.79□□□□□ -0.52
UBLCP1-202ENST00000519276 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
UBLCP1-202ENST00000519276 BAP1Q92560 729 aa11.78□□□□□ -0.52
UBLCP1-202ENST00000519276 MAN1A2O60476 641 aa11.77□□□□□ -0.53
UBLCP1-202ENST00000519276 PTPRNQ16849 979 aa11.77□□□□□ -0.53
UBLCP1-202ENST00000519276 KLF16Q9BXK1 252 aaPredicted RBP11.77□□□□□ -0.53
UBLCP1-202ENST00000519276 EVA1BQ9NVM1 165 aa11.77□□□□□ -0.53
UBLCP1-202ENST00000519276 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
UBLCP1-202ENST00000519276 MDM2Q00987 491 aaPredicted RBP11.75□□□□□ -0.53
UBLCP1-202ENST00000519276 ZNF511Q8NB15 262 aa11.75□□□□□ -0.53
UBLCP1-202ENST00000519276 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
UBLCP1-202ENST00000519276 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
UBLCP1-202ENST00000519276 KCNH2Q12809 1159 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms