RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 HFM1A2PYH4 1435 aa17.3■□□□□ 0.36
CTNNA1-205ENST00000517904 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
CTNNA1-205ENST00000517904 PXDNQ92626 1479 aa17.29■□□□□ 0.36
CTNNA1-205ENST00000517904 NAIPQ13075 1403 aa17.29■□□□□ 0.36
CTNNA1-205ENST00000517904 PPLO60437 1756 aa17.28■□□□□ 0.36
CTNNA1-205ENST00000517904 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
CTNNA1-205ENST00000517904 MARF1Q9Y4F3 1742 aaKnown RBP17.27■□□□□ 0.36
CTNNA1-205ENST00000517904 ESCO1Q5FWF5 840 aa17.26■□□□□ 0.35
CTNNA1-205ENST00000517904 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
CTNNA1-205ENST00000517904 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
CTNNA1-205ENST00000517904 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
CTNNA1-205ENST00000517904 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
CTNNA1-205ENST00000517904 FOXO3O43524 673 aa17.23■□□□□ 0.35
CTNNA1-205ENST00000517904 GJD4Q96KN9 370 aaPredicted RBP17.22■□□□□ 0.35
CTNNA1-205ENST00000517904 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
CTNNA1-205ENST00000517904 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.21■□□□□ 0.35
CTNNA1-205ENST00000517904 GLI3P10071 1580 aa17.2■□□□□ 0.34
CTNNA1-205ENST00000517904 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
CTNNA1-205ENST00000517904 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
CTNNA1-205ENST00000517904 FOXD1Q16676 465 aa17.19■□□□□ 0.34
CTNNA1-205ENST00000517904 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
CTNNA1-205ENST00000517904 TECPR2O15040 1411 aa17.19■□□□□ 0.34
CTNNA1-205ENST00000517904 ADGRF5Q8IZF2 1346 aa17.19■□□□□ 0.34
CTNNA1-205ENST00000517904 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
CTNNA1-205ENST00000517904 SLIT2O94813 1529 aa17.18■□□□□ 0.34
CTNNA1-205ENST00000517904 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
CTNNA1-205ENST00000517904 STK26Q9P289 416 aa17.17■□□□□ 0.34
CTNNA1-205ENST00000517904 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
CTNNA1-205ENST00000517904 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
CTNNA1-205ENST00000517904 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
CTNNA1-205ENST00000517904 BRWD3Q6RI45 1802 aa17.16■□□□□ 0.34
CTNNA1-205ENST00000517904 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
CTNNA1-205ENST00000517904 USP32Q8NFA0 1604 aa17.15■□□□□ 0.34
CTNNA1-205ENST00000517904 KNDC1Q76NI1 1749 aa17.15■□□□□ 0.34
CTNNA1-205ENST00000517904 IFT172Q9UG01 1749 aa17.15■□□□□ 0.34
CTNNA1-205ENST00000517904 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
CTNNA1-205ENST00000517904 BLMP54132 1417 aaPredicted RBP17.14■□□□□ 0.33
CTNNA1-205ENST00000517904 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
CTNNA1-205ENST00000517904 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
CTNNA1-205ENST00000517904 TMEM132EQ6IEE7 984 aa17.13■□□□□ 0.33
CTNNA1-205ENST00000517904 ABCC11Q96J66 1382 aa17.13■□□□□ 0.33
CTNNA1-205ENST00000517904 DEFB132Q7Z7B7 95 aa17.12■□□□□ 0.33
CTNNA1-205ENST00000517904 CCDC144AA2RUR9 1427 aa17.12■□□□□ 0.33
CTNNA1-205ENST00000517904 RGL3Q3MIN7 710 aa17.11■□□□□ 0.33
CTNNA1-205ENST00000517904 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
CTNNA1-205ENST00000517904 PIK3C2GO75747 1445 aa17.1■□□□□ 0.33
CTNNA1-205ENST00000517904 RGPD8O14715 1765 aaPredicted RBP17.1■□□□□ 0.33
CTNNA1-205ENST00000517904 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
CTNNA1-205ENST00000517904 ANKRD30BQ9BXX2 1392 aa17.09■□□□□ 0.33
CTNNA1-205ENST00000517904 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
CTNNA1-205ENST00000517904 PLCH1Q4KWH8 1693 aa17.09■□□□□ 0.33
CTNNA1-205ENST00000517904 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.32
CTNNA1-205ENST00000517904 CABLES1Q8TDN4 633 aa17.08■□□□□ 0.32
CTNNA1-205ENST00000517904 ABCA3Q99758 1704 aa17.07■□□□□ 0.32
CTNNA1-205ENST00000517904 VPS72Q15906 364 aa17.07■□□□□ 0.32
CTNNA1-205ENST00000517904 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
CTNNA1-205ENST00000517904 ONECUT3O60422 494 aaPredicted RBP17.05■□□□□ 0.32
CTNNA1-205ENST00000517904 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
CTNNA1-205ENST00000517904 PHF8Q9UPP1 1060 aa17.05■□□□□ 0.32
CTNNA1-205ENST00000517904 LRP5O75197 1615 aa17.04■□□□□ 0.32
CTNNA1-205ENST00000517904 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
CTNNA1-205ENST00000517904 NRXN1Q9ULB1 1477 aa17.04■□□□□ 0.32
CTNNA1-205ENST00000517904 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
CTNNA1-205ENST00000517904 PSME1Q06323 249 aa17.02■□□□□ 0.32
CTNNA1-205ENST00000517904 KRT27Q7Z3Y8 459 aa17.02■□□□□ 0.32
CTNNA1-205ENST00000517904 SIRT1Q96EB6 747 aa17.02■□□□□ 0.32
CTNNA1-205ENST00000517904 SBNO1A3KN83 1393 aa17.02■□□□□ 0.31
CTNNA1-205ENST00000517904 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
CTNNA1-205ENST00000517904 FAM83GA6ND36 823 aa17■□□□□ 0.31
CTNNA1-205ENST00000517904 NRAPQ86VF7 1730 aa17■□□□□ 0.31
CTNNA1-205ENST00000517904 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
CTNNA1-205ENST00000517904 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
CTNNA1-205ENST00000517904 ARHGEF10O15013 1369 aa17■□□□□ 0.31
CTNNA1-205ENST00000517904 LMOD2Q6P5Q4 547 aa16.99■□□□□ 0.31
CTNNA1-205ENST00000517904 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
CTNNA1-205ENST00000517904 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
CTNNA1-205ENST00000517904 PRAM1Q96QH2 718 aa16.98■□□□□ 0.31
CTNNA1-205ENST00000517904 TRPM3Q9HCF6 1732 aaPredicted RBP16.97■□□□□ 0.31
CTNNA1-205ENST00000517904 PSDA5PKW4 1024 aaPredicted RBP16.97■□□□□ 0.31
CTNNA1-205ENST00000517904 PMFBP1Q8TBY8 1022 aa16.97■□□□□ 0.31
CTNNA1-205ENST00000517904 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.31
CTNNA1-205ENST00000517904 DHX57Q6P158 1386 aaKnown RBP16.96■□□□□ 0.31
CTNNA1-205ENST00000517904 A0A0G2JS52 829 aa16.95■□□□□ 0.3
CTNNA1-205ENST00000517904 HRCP23327 699 aa16.95■□□□□ 0.3
CTNNA1-205ENST00000517904 MYT1Q01538 1121 aa16.95■□□□□ 0.3
CTNNA1-205ENST00000517904 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
CTNNA1-205ENST00000517904 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
CTNNA1-205ENST00000517904 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
CTNNA1-205ENST00000517904 BAG6P46379 1132 aa16.94■□□□□ 0.3
CTNNA1-205ENST00000517904 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
CTNNA1-205ENST00000517904 DLC1Q96QB1 1528 aa16.94■□□□□ 0.3
CTNNA1-205ENST00000517904 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
CTNNA1-205ENST00000517904 EN1Q05925 392 aaPredicted RBP16.92■□□□□ 0.3
CTNNA1-205ENST00000517904 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
CTNNA1-205ENST00000517904 RGPD1P0DJD0 1748 aa16.92■□□□□ 0.3
CTNNA1-205ENST00000517904 CRYBG1Q9Y4K1 1723 aa16.92■□□□□ 0.3
CTNNA1-205ENST00000517904 ADGRB1O14514 1584 aa16.91■□□□□ 0.3
CTNNA1-205ENST00000517904 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
CTNNA1-205ENST00000517904 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
CTNNA1-205ENST00000517904 POGKQ9P215 609 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms