RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 TECPR2O15040 1411 aa13.05□□□□□ -0.32
PABPC1-202ENST00000517403 ATF3P18847 181 aa13.05□□□□□ -0.32
PABPC1-202ENST00000517403 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
PABPC1-202ENST00000517403 RAB3GAP2Q9H2M9 1393 aa13.05□□□□□ -0.32
PABPC1-202ENST00000517403 CCDC144AA2RUR9 1427 aa13.05□□□□□ -0.32
PABPC1-202ENST00000517403 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-202ENST00000517403 COL22A1Q8NFW1 1626 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-202ENST00000517403 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
PABPC1-202ENST00000517403 PXDNQ92626 1479 aa13.04□□□□□ -0.32
PABPC1-202ENST00000517403 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
PABPC1-202ENST00000517403 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
PABPC1-202ENST00000517403 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
PABPC1-202ENST00000517403 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
PABPC1-202ENST00000517403 SPATA31A6Q5VVP1 1343 aa13.01□□□□□ -0.33
PABPC1-202ENST00000517403 MYOM2P54296 1465 aa13.01□□□□□ -0.33
PABPC1-202ENST00000517403 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
PABPC1-202ENST00000517403 RPGRIP1LQ68CZ1 1315 aa13□□□□□ -0.33
PABPC1-202ENST00000517403 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
PABPC1-202ENST00000517403 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
PABPC1-202ENST00000517403 NUTM2BA6NNL0 878 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-202ENST00000517403 NUTM2EB1AL46 878 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-202ENST00000517403 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-202ENST00000517403 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-202ENST00000517403 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
PABPC1-202ENST00000517403 RGS12O14924 1447 aa12.98□□□□□ -0.33
PABPC1-202ENST00000517403 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
PABPC1-202ENST00000517403 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
PABPC1-202ENST00000517403 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.33
PABPC1-202ENST00000517403 AFF2P51816 1311 aa12.96□□□□□ -0.33
PABPC1-202ENST00000517403 XPCQ01831 940 aaPredicted RBP12.96□□□□□ -0.33
PABPC1-202ENST00000517403 STK26Q9P289 416 aa12.96□□□□□ -0.33
PABPC1-202ENST00000517403 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
PABPC1-202ENST00000517403 ADGRB2O60241 1585 aa12.95□□□□□ -0.34
PABPC1-202ENST00000517403 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
PABPC1-202ENST00000517403 ARHGEF28Q8N1W1 1705 aaKnown RBP12.94□□□□□ -0.34
PABPC1-202ENST00000517403 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
PABPC1-202ENST00000517403 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
PABPC1-202ENST00000517403 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-202ENST00000517403 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
PABPC1-202ENST00000517403 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-202ENST00000517403 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
PABPC1-202ENST00000517403 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
PABPC1-202ENST00000517403 DLC1Q96QB1 1528 aa12.92□□□□□ -0.34
PABPC1-202ENST00000517403 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-202ENST00000517403 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
PABPC1-202ENST00000517403 GLI3P10071 1580 aa12.9□□□□□ -0.34
PABPC1-202ENST00000517403 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
PABPC1-202ENST00000517403 FKBP8Q14318 412 aa12.9□□□□□ -0.34
PABPC1-202ENST00000517403 C8orf37Q96NL8 207 aa12.9□□□□□ -0.34
PABPC1-202ENST00000517403 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
PABPC1-202ENST00000517403 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
PABPC1-202ENST00000517403 LRRC59Q96AG4 307 aaKnown RBP12.89□□□□□ -0.35
PABPC1-202ENST00000517403 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
PABPC1-202ENST00000517403 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
PABPC1-202ENST00000517403 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
PABPC1-202ENST00000517403 ATRNO75882 1429 aa12.88□□□□□ -0.35
PABPC1-202ENST00000517403 FOXO3O43524 673 aa12.88□□□□□ -0.35
PABPC1-202ENST00000517403 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
PABPC1-202ENST00000517403 SAFB2Q14151 953 aaKnown RBP eCLIP12.87□□□□□ -0.35
PABPC1-202ENST00000517403 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
PABPC1-202ENST00000517403 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
PABPC1-202ENST00000517403 NRAPQ86VF7 1730 aa12.86□□□□□ -0.35
PABPC1-202ENST00000517403 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-202ENST00000517403 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
PABPC1-202ENST00000517403 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
PABPC1-202ENST00000517403 SLIT2O94813 1529 aa12.84□□□□□ -0.35
PABPC1-202ENST00000517403 SPATA31A3Q5VYP0 1347 aa12.84□□□□□ -0.35
PABPC1-202ENST00000517403 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
PABPC1-202ENST00000517403 TULP4Q9NRJ4 1543 aa12.83□□□□□ -0.35
PABPC1-202ENST00000517403 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
PABPC1-202ENST00000517403 RXRBP28702 533 aa12.83□□□□□ -0.36
PABPC1-202ENST00000517403 ATP7BP35670 1465 aa12.83□□□□□ -0.36
PABPC1-202ENST00000517403 FNBP4Q8N3X1 1017 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-202ENST00000517403 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-202ENST00000517403 QTRT2Q9H974 415 aaKnown RBP12.82□□□□□ -0.36
PABPC1-202ENST00000517403 EP400Q96L91 3159 aa12.82□□□□□ -0.36
PABPC1-202ENST00000517403 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
PABPC1-202ENST00000517403 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
PABPC1-202ENST00000517403 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
PABPC1-202ENST00000517403 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
PABPC1-202ENST00000517403 KIAA1210Q9ULL0 1709 aa12.8□□□□□ -0.36
PABPC1-202ENST00000517403 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
PABPC1-202ENST00000517403 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
PABPC1-202ENST00000517403 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
PABPC1-202ENST00000517403 TRAK1Q9UPV9 953 aa12.8□□□□□ -0.36
PABPC1-202ENST00000517403 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-202ENST00000517403 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
PABPC1-202ENST00000517403 RALGAPBQ86X10 1494 aa12.79□□□□□ -0.36
PABPC1-202ENST00000517403 DCAF11Q8TEB1 546 aa12.79□□□□□ -0.36
PABPC1-202ENST00000517403 USP21Q9UK80 565 aa12.79□□□□□ -0.36
PABPC1-202ENST00000517403 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
PABPC1-202ENST00000517403 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
PABPC1-202ENST00000517403 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
PABPC1-202ENST00000517403 PMFBP1Q8TBY8 1022 aa12.78□□□□□ -0.36
PABPC1-202ENST00000517403 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
PABPC1-202ENST00000517403 ITSN1Q15811 1721 aa12.77□□□□□ -0.36
PABPC1-202ENST00000517403 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
PABPC1-202ENST00000517403 QRICH2Q9H0J4 1663 aa12.76□□□□□ -0.37
PABPC1-202ENST00000517403 NBPF1Q3BBV0 1214 aa12.75□□□□□ -0.37
PABPC1-202ENST00000517403 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms