RNA–Protein interactions for RNA: ENST00000517015.1

SNORA48.11-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 89 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.11-201ENST00000517015 LHX6Q9UPM6 363 aa3.88□□□□□ -1.79
SNORA48.11-201ENST00000517015 LOC105371045A0A1W2PR82 267 aa3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 TRIM6-TRIM34B2RNG4 842 aa3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 HOXB3P14651 431 aaPredicted RBP3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 GCGRP47871 477 aa3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 MTMR2Q13614 643 aa3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 PPP4R3BQ5MIZ7 849 aa3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 TBC1D9Q6ZT07 1266 aa3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 SND1Q7KZF4 910 aaKnown RBP eCLIP3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 HELBQ8NG08 1087 aaPredicted RBP3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 TFIP11Q9UBB9 837 aaKnown RBP3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 MAFBQ9Y5Q3 323 aaPredicted RBP3.87□□□□□ -1.79
SNORA48.11-201ENST00000517015 C6orf229H3BNL8 230 aa3.86□□□□□ -1.79
SNORA48.11-201ENST00000517015 SLC10A3P09131 477 aa3.86□□□□□ -1.79
SNORA48.11-201ENST00000517015 POTEIP0CG38 1075 aa3.86□□□□□ -1.79
SNORA48.11-201ENST00000517015 PTPREP23469 700 aa3.86□□□□□ -1.79
SNORA48.11-201ENST00000517015 NR6A1Q15406 480 aa3.86□□□□□ -1.79
SNORA48.11-201ENST00000517015 VRTNQ9H8Y1 702 aa3.86□□□□□ -1.79
SNORA48.11-201ENST00000517015 BCL2L12Q9HB09 334 aa3.86□□□□□ -1.79
SNORA48.11-201ENST00000517015 E9PSI1 815 aa3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 PER1O15534 1290 aaPredicted RBP3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 ATG7O95352 703 aa3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 USP46P62068 366 aa3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 DOK7Q18PE1 504 aa3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 SWT1Q5T5J6 900 aaKnown RBP3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 GPR153Q6NV75 609 aa3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 SYMPKQ92797 1274 aaKnown RBP3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 MYT1LQ9UL68 1186 aa3.85□□□□□ -1.79
SNORA48.11-201ENST00000517015 PIK3CDO00329 1044 aa3.84□□□□□ -1.79
SNORA48.11-201ENST00000517015 FUT2Q10981 343 aa3.84□□□□□ -1.79
SNORA48.11-201ENST00000517015 PACS2Q86VP3 889 aa3.84□□□□□ -1.79
SNORA48.11-201ENST00000517015 STK32AQ8WU08 396 aa3.84□□□□□ -1.79
SNORA48.11-201ENST00000517015 KCNK17Q96T54 332 aa3.84□□□□□ -1.79
SNORA48.11-201ENST00000517015 SEPT9Q9UHD8 586 aaPredicted RBP3.84□□□□□ -1.79
SNORA48.11-201ENST00000517015 ZMIZ1Q9ULJ6 1067 aa3.84□□□□□ -1.79
SNORA48.11-201ENST00000517015 UNCXA6NJT0 531 aa3.83□□□□□ -1.8
SNORA48.11-201ENST00000517015 SEMA3FQ13275 785 aa3.83□□□□□ -1.8
SNORA48.11-201ENST00000517015 TMEM164Q5U3C3 297 aa3.83□□□□□ -1.8
SNORA48.11-201ENST00000517015 RIMBP2O15034 1052 aa3.82□□□□□ -1.8
SNORA48.11-201ENST00000517015 ATP9BO43861 1147 aa3.82□□□□□ -1.8
SNORA48.11-201ENST00000517015 RNF40O75150 1001 aa3.82□□□□□ -1.8
SNORA48.11-201ENST00000517015 CFHP08603 1231 aa3.82□□□□□ -1.8
SNORA48.11-201ENST00000517015 SOX11P35716 441 aa3.82□□□□□ -1.8
SNORA48.11-201ENST00000517015 SLF2Q8IX21 1173 aa3.82□□□□□ -1.8
SNORA48.11-201ENST00000517015 KIAA1468Q9P260 1216 aa3.82□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L3A6NCW0 530 aa3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L4A6NCW7 530 aa3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 FBXO45P0C2W1 286 aa3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 KANK4Q5T7N3 995 aaPredicted RBP3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L2Q6R6M4 530 aa3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L1Q7RTZ2 530 aa3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 DEPDC4Q8N2C3 294 aa3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 ZSWIM6Q9HCJ5 1215 aa3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 NOVA2Q9UNW9 492 aaKnown RBP3.81□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L5A8MUK1 530 aa3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 POTEJP0CG39 1038 aa3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 PSEN2P49810 448 aa3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 EIF4G2P78344 907 aaKnown RBP eCLIP3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 RSPH4AQ5TD94 716 aa3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 PHLDB3Q6NSJ2 640 aa3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 FAM174AQ8TBP5 190 aa3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 SLAIN2Q9P270 581 aa3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 GNEQ9Y223 722 aaKnown RBP3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 AMOTL2Q9Y2J4 779 aa3.8□□□□□ -1.8
SNORA48.11-201ENST00000517015 PSDA5PKW4 1024 aaPredicted RBP3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L15C9J2P7 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L10C9JJH3 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L13C9JLJ4 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L12C9JPN9 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L11C9JVI0 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L21D6R901 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L18D6R9N7 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L22D6RA61 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L17D6RBQ6 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L19D6RCP7 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L20D6RJB6 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 SKIP12755 728 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 SCNN1AP37088 669 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP17L24Q0WX57 530 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 NR1H3Q13133 447 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 PUS10Q3MIT2 529 aaKnown RBP3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 CRTC2Q53ET0 693 aaPredicted RBP3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 B4GALNT3Q6L9W6 998 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 TXNDC2Q86VQ3 553 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 ZBED2Q9BTP6 218 aa3.79□□□□□ -1.8
SNORA48.11-201ENST00000517015 ZBBXA8MT70 800 aa3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 SERPINB4P48594 390 aa3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 ELOAQ14241 798 aaKnown RBP3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 NOM1Q5C9Z4 860 aaKnown RBP3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 RNF19BQ6ZMZ0 732 aa3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 SAMD7Q7Z3H4 446 aa3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 RETREG3Q86VR2 466 aa3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 PNMA1Q8ND90 353 aa3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 CCER1Q8TC90 406 aaPredicted RBP3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 MAP10Q9P2G4 905 aa3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 USP35Q9P2H5 1018 aa3.78□□□□□ -1.8
SNORA48.11-201ENST00000517015 ATP6V1AP38606 617 aa3.77□□□□□ -1.81
SNORA48.11-201ENST00000517015 NCOA4Q13772 614 aa3.77□□□□□ -1.81
SNORA48.11-201ENST00000517015 GRIPAP1Q4V328 841 aa3.77□□□□□ -1.81
SNORA48.11-201ENST00000517015 DNAJC14Q6Y2X3 702 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms