RNA–Protein interactions for RNA: ENST00000517012.1

RNU6-388P-201, Transcript of RNA, U6 small nuclear 388, pseudogene, humanhuman

BASIC

Gene RNU6-388P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-388P-201ENST00000517012 TRIM32Q13049 653 aa7.4□□□□□ -1.22
RNU6-388P-201ENST00000517012 ARHGEF1Q92888 912 aaKnown RBP7.4□□□□□ -1.22
RNU6-388P-201ENST00000517012 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.4□□□□□ -1.22
RNU6-388P-201ENST00000517012 SLC27A5Q9Y2P5 690 aa7.4□□□□□ -1.22
RNU6-388P-201ENST00000517012 BRICD5Q6PL45 260 aa7.39□□□□□ -1.23
RNU6-388P-201ENST00000517012 HPS1Q92902 700 aa7.39□□□□□ -1.23
RNU6-388P-201ENST00000517012 SUZ12Q15022 739 aaKnown RBP7.38□□□□□ -1.23
RNU6-388P-201ENST00000517012 METTL3Q86U44 580 aaKnown RBP7.38□□□□□ -1.23
RNU6-388P-201ENST00000517012 RDH13Q8NBN7 331 aa7.38□□□□□ -1.23
RNU6-388P-201ENST00000517012 PRDM9Q9NQV7 894 aa7.38□□□□□ -1.23
RNU6-388P-201ENST00000517012 DAXXQ9UER7 740 aaPredicted RBP7.37□□□□□ -1.23
RNU6-388P-201ENST00000517012 FECHP22830 423 aa7.36□□□□□ -1.23
RNU6-388P-201ENST00000517012 H3BM21 787 aa7.34□□□□□ -1.23
RNU6-388P-201ENST00000517012 GCGRP47871 477 aa7.34□□□□□ -1.23
RNU6-388P-201ENST00000517012 MMP16P51512 607 aa7.34□□□□□ -1.23
RNU6-388P-201ENST00000517012 GRIPAP1Q4V328 841 aa7.34□□□□□ -1.23
RNU6-388P-201ENST00000517012 WNT7BP56706 349 aa7.33□□□□□ -1.24
RNU6-388P-201ENST00000517012 HIC1Q14526 733 aa7.33□□□□□ -1.24
RNU6-388P-201ENST00000517012 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
RNU6-388P-201ENST00000517012 DDX11L8A8MPP1 907 aa7.32□□□□□ -1.24
RNU6-388P-201ENST00000517012 Q3C1V9 767 aa7.32□□□□□ -1.24
RNU6-388P-201ENST00000517012 RC3H1Q5TC82 1133 aaKnown RBP7.32□□□□□ -1.24
RNU6-388P-201ENST00000517012 RNF19BQ6ZMZ0 732 aa7.31□□□□□ -1.24
RNU6-388P-201ENST00000517012 ALDH1A1P00352 501 aa7.29□□□□□ -1.24
RNU6-388P-201ENST00000517012 ERBB4Q15303 1308 aa7.28□□□□□ -1.24
RNU6-388P-201ENST00000517012 DXOO77932 396 aaKnown RBP7.28□□□□□ -1.24
RNU6-388P-201ENST00000517012 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
RNU6-388P-201ENST00000517012 PAXIP1Q6ZW49 1069 aaPredicted RBP7.28□□□□□ -1.24
RNU6-388P-201ENST00000517012 TRIM46Q7Z4K8 759 aa7.28□□□□□ -1.24
RNU6-388P-201ENST00000517012 CFAP44Q96MT7 982 aa7.28□□□□□ -1.24
RNU6-388P-201ENST00000517012 CAPN5O15484 640 aaPredicted RBP7.27□□□□□ -1.25
RNU6-388P-201ENST00000517012 VEGFBP49765 207 aa7.27□□□□□ -1.25
RNU6-388P-201ENST00000517012 USB1Q9BQ65 265 aaKnown RBP7.27□□□□□ -1.25
RNU6-388P-201ENST00000517012 BMP1P13497 986 aa7.26□□□□□ -1.25
RNU6-388P-201ENST00000517012 SKOR1P84550 965 aa7.26□□□□□ -1.25
RNU6-388P-201ENST00000517012 KCNV2Q8TDN2 545 aa7.25□□□□□ -1.25
RNU6-388P-201ENST00000517012 VSIG8P0DPA2 414 aa7.24□□□□□ -1.25
RNU6-388P-201ENST00000517012 CCDC24Q8N4L8 307 aa7.24□□□□□ -1.25
RNU6-388P-201ENST00000517012 WASF2Q9Y6W5 498 aa7.24□□□□□ -1.25
RNU6-388P-201ENST00000517012 GNPATO15228 680 aa7.23□□□□□ -1.25
RNU6-388P-201ENST00000517012 SIAH2O43255 324 aa7.23□□□□□ -1.25
RNU6-388P-201ENST00000517012 KCTD17Q8N5Z5 321 aa7.23□□□□□ -1.25
RNU6-388P-201ENST00000517012 EHBP1Q8NDI1 1231 aa7.21□□□□□ -1.26
RNU6-388P-201ENST00000517012 ZFP42Q96MM3 310 aa7.21□□□□□ -1.26
RNU6-388P-201ENST00000517012 GSK3AP49840 483 aa7.2□□□□□ -1.26
RNU6-388P-201ENST00000517012 TMEM151AQ8N4L1 468 aa7.2□□□□□ -1.26
RNU6-388P-201ENST00000517012 SCARF1Q14162 830 aa7.18□□□□□ -1.26
RNU6-388P-201ENST00000517012 NLRP7Q8WX94 980 aa7.18□□□□□ -1.26
RNU6-388P-201ENST00000517012 RNF225M0QZC1 329 aaPredicted RBP7.17□□□□□ -1.26
RNU6-388P-201ENST00000517012 P3H3Q8IVL6 736 aa7.17□□□□□ -1.26
RNU6-388P-201ENST00000517012 SEMA3EO15041 775 aa7.16□□□□□ -1.26
RNU6-388P-201ENST00000517012 KDM4AO75164 1064 aa7.16□□□□□ -1.26
RNU6-388P-201ENST00000517012 GDF11O95390 407 aa7.16□□□□□ -1.26
RNU6-388P-201ENST00000517012 USP46P62068 366 aa7.16□□□□□ -1.26
RNU6-388P-201ENST00000517012 CD46P15529 392 aa7.15□□□□□ -1.26
RNU6-388P-201ENST00000517012 JUNDP17535 347 aa7.15□□□□□ -1.26
RNU6-388P-201ENST00000517012 RASSF7Q02833 373 aa7.15□□□□□ -1.26
RNU6-388P-201ENST00000517012 MRPL14Q6P1L8 145 aaKnown RBP7.15□□□□□ -1.26
RNU6-388P-201ENST00000517012 PHOX2BQ99453 314 aa7.15□□□□□ -1.26
RNU6-388P-201ENST00000517012 SMYD5Q6GMV2 418 aa7.14□□□□□ -1.27
RNU6-388P-201ENST00000517012 PLEKHG3A1L390 1219 aa7.13□□□□□ -1.27
RNU6-388P-201ENST00000517012 NUDT12Q9BQG2 462 aa7.13□□□□□ -1.27
RNU6-388P-201ENST00000517012 GPR37O15354 613 aa7.12□□□□□ -1.27
RNU6-388P-201ENST00000517012 RBM26Q5T8P6 1007 aaKnown RBP7.12□□□□□ -1.27
RNU6-388P-201ENST00000517012 MPNDQ8N594 471 aa7.12□□□□□ -1.27
RNU6-388P-201ENST00000517012 PURBQ96QR8 312 aaKnown RBP7.12□□□□□ -1.27
RNU6-388P-201ENST00000517012 SH3BP2P78314 561 aa7.11□□□□□ -1.27
RNU6-388P-201ENST00000517012 PTCRAQ6ISU1 281 aaPredicted RBP7.11□□□□□ -1.27
RNU6-388P-201ENST00000517012 ADH1CP00326 375 aa7.1□□□□□ -1.27
RNU6-388P-201ENST00000517012 IGHA1P01876 353 aa7.1□□□□□ -1.27
RNU6-388P-201ENST00000517012 HOXA2O43364 376 aa7.09□□□□□ -1.27
RNU6-388P-201ENST00000517012 NNTQ13423 1086 aa7.09□□□□□ -1.27
RNU6-388P-201ENST00000517012 ADAMTS8Q9UP79 889 aa7.09□□□□□ -1.27
RNU6-388P-201ENST00000517012 TESPA1A2RU30 521 aaPredicted RBP7.08□□□□□ -1.28
RNU6-388P-201ENST00000517012 MAN1A2O60476 641 aa7.08□□□□□ -1.28
RNU6-388P-201ENST00000517012 PPFIA3O75145 1194 aa7.08□□□□□ -1.28
RNU6-388P-201ENST00000517012 TIMP2P16035 220 aa7.08□□□□□ -1.28
RNU6-388P-201ENST00000517012 VARSP26640 1264 aaKnown RBP7.08□□□□□ -1.28
RNU6-388P-201ENST00000517012 RETREG3Q86VR2 466 aa7.08□□□□□ -1.28
RNU6-388P-201ENST00000517012 SOBPA7XYQ1 873 aa7.07□□□□□ -1.28
RNU6-388P-201ENST00000517012 WDR4P57081 412 aaKnown RBP7.07□□□□□ -1.28
RNU6-388P-201ENST00000517012 HLA-CQ95604 372 aa7.07□□□□□ -1.28
RNU6-388P-201ENST00000517012 DNMT3AQ9Y6K1 912 aaPredicted RBP7.07□□□□□ -1.28
RNU6-388P-201ENST00000517012 TLL2Q9Y6L7 1015 aa7.07□□□□□ -1.28
RNU6-388P-201ENST00000517012 CCNYL3P0C7X3 344 aa7.06□□□□□ -1.28
RNU6-388P-201ENST00000517012 FOXK2Q01167 660 aa7.05□□□□□ -1.28
RNU6-388P-201ENST00000517012 KLF16Q9BXK1 252 aaPredicted RBP7.05□□□□□ -1.28
RNU6-388P-201ENST00000517012 MS4A1P11836 297 aa7.04□□□□□ -1.28
RNU6-388P-201ENST00000517012 UNC93B1Q9H1C4 597 aa7.04□□□□□ -1.28
RNU6-388P-201ENST00000517012 TSHZ2Q9NRE2 1034 aa7.04□□□□□ -1.28
RNU6-388P-201ENST00000517012 PTPRNQ16849 979 aa7.03□□□□□ -1.28
RNU6-388P-201ENST00000517012 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
RNU6-388P-201ENST00000517012 SYMPKQ92797 1274 aaKnown RBP7.03□□□□□ -1.28
RNU6-388P-201ENST00000517012 EVA1BQ9NVM1 165 aa7.03□□□□□ -1.28
RNU6-388P-201ENST00000517012 GUCA2AQ02747 115 aa7.02□□□□□ -1.29
RNU6-388P-201ENST00000517012 ZNF511Q8NB15 262 aa7.02□□□□□ -1.29
RNU6-388P-201ENST00000517012 BAP1Q92560 729 aa7.02□□□□□ -1.29
RNU6-388P-201ENST00000517012 UPP2O95045 317 aa7.01□□□□□ -1.29
RNU6-388P-201ENST00000517012 LINC01559Q495D7 138 aa7.01□□□□□ -1.29
RNU6-388P-201ENST00000517012 KANK3Q6NY19 840 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms