RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TNRQ92752 1358 aa8.52□□□□□ -1.05
SCARNA6.1-201ENST00000516989 TRPC6Q9Y210 931 aa8.52□□□□□ -1.05
SCARNA6.1-201ENST00000516989 MROH1Q8NDA8 1641 aa8.51□□□□□ -1.05
SCARNA6.1-201ENST00000516989 HSPA2P54652 639 aa8.51□□□□□ -1.05
SCARNA6.1-201ENST00000516989 IDI1Q13907 227 aa8.51□□□□□ -1.05
SCARNA6.1-201ENST00000516989 NPATQ14207 1427 aa8.51□□□□□ -1.05
SCARNA6.1-201ENST00000516989 PZPP20742 1482 aa8.51□□□□□ -1.05
SCARNA6.1-201ENST00000516989 CFAP65Q6ZU64 1925 aaKnown RBP8.5□□□□□ -1.05
SCARNA6.1-201ENST00000516989 PRDM15P57071 1507 aaPredicted RBP8.5□□□□□ -1.05
SCARNA6.1-201ENST00000516989 FAM135AQ9P2D6 1515 aa8.5□□□□□ -1.05
SCARNA6.1-201ENST00000516989 ARHGAP31Q2M1Z3 1444 aa8.5□□□□□ -1.05
SCARNA6.1-201ENST00000516989 BARGINQ6ZT62 677 aa8.5□□□□□ -1.05
SCARNA6.1-201ENST00000516989 MS4A3Q96HJ5 214 aa8.5□□□□□ -1.05
SCARNA6.1-201ENST00000516989 SLC52A1Q9NWF4 448 aa8.5□□□□□ -1.05
SCARNA6.1-201ENST00000516989 C3P01024 1663 aa8.49□□□□□ -1.05
SCARNA6.1-201ENST00000516989 GCC2Q8IWJ2 1684 aa8.49□□□□□ -1.05
SCARNA6.1-201ENST00000516989 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
SCARNA6.1-201ENST00000516989 THEMISQ8N1K5 641 aaPredicted RBP8.49□□□□□ -1.05
SCARNA6.1-201ENST00000516989 DEPDC5O75140 1603 aa8.49□□□□□ -1.05
SCARNA6.1-201ENST00000516989 SETD1BQ9UPS6 1966 aaKnown RBP8.49□□□□□ -1.05
SCARNA6.1-201ENST00000516989 LMTK2Q8IWU2 1503 aa8.49□□□□□ -1.05
SCARNA6.1-201ENST00000516989 CEP152O94986 1710 aa8.49□□□□□ -1.05
SCARNA6.1-201ENST00000516989 UNC13BO14795 1591 aa8.48□□□□□ -1.05
SCARNA6.1-201ENST00000516989 VWDEQ8N2E2 1590 aa8.48□□□□□ -1.05
SCARNA6.1-201ENST00000516989 MROH2AA6NES4 1674 aa8.48□□□□□ -1.05
SCARNA6.1-201ENST00000516989 ZC3H13Q5T200 1668 aaKnown RBP8.47□□□□□ -1.05
SCARNA6.1-201ENST00000516989 ERVK-7P63135 1459 aa8.47□□□□□ -1.05
SCARNA6.1-201ENST00000516989 MLLT3P42568 568 aaPredicted RBP8.47□□□□□ -1.05
SCARNA6.1-201ENST00000516989 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
SCARNA6.1-201ENST00000516989 CAMSAP1Q5T5Y3 1602 aa8.47□□□□□ -1.05
SCARNA6.1-201ENST00000516989 PPP1R15BQ5SWA1 713 aa8.46□□□□□ -1.06
SCARNA6.1-201ENST00000516989 GPHNQ9NQX3 736 aaPredicted RBP8.46□□□□□ -1.06
SCARNA6.1-201ENST00000516989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.46□□□□□ -1.06
SCARNA6.1-201ENST00000516989 IQGAP3Q86VI3 1631 aa8.46□□□□□ -1.06
SCARNA6.1-201ENST00000516989 RPRD2Q5VT52 1461 aaKnown RBP8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 EFCAB6Q5THR3 1501 aa8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 ZNF326Q5BKZ1 582 aaKnown RBP8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 TXNDC2Q86VQ3 553 aa8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 ANKLE2Q86XL3 938 aa8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 TET3O43151 1660 aa8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 NOS1P29475 1434 aa8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 NLRP1Q9C000 1473 aa8.45□□□□□ -1.06
SCARNA6.1-201ENST00000516989 SPATA31D1Q6ZQQ2 1576 aa8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 TTLL13PA6NNM8 815 aa8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 TIE1P35590 1138 aa8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 KRI1Q8N9T8 703 aaKnown RBP8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 AK7Q96M32 723 aa8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 ARXQ96QS3 562 aa8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 EID1Q9Y6B2 187 aa8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 DISP3Q9P2K9 1392 aa8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 A2ML1A8K2U0 1454 aa8.44□□□□□ -1.06
SCARNA6.1-201ENST00000516989 RGL3Q3MIN7 710 aa8.43□□□□□ -1.06
SCARNA6.1-201ENST00000516989 NUTM2DQ5VT03 806 aaPredicted RBP8.43□□□□□ -1.06
SCARNA6.1-201ENST00000516989 GPIHBP1Q8IV16 184 aa8.43□□□□□ -1.06
SCARNA6.1-201ENST00000516989 PTPRTO14522 1441 aa8.43□□□□□ -1.06
SCARNA6.1-201ENST00000516989 E9PCH4 1651 aa8.43□□□□□ -1.06
SCARNA6.1-201ENST00000516989 PPP1R15AO75807 674 aaPredicted RBP8.42□□□□□ -1.06
SCARNA6.1-201ENST00000516989 PREX1Q8TCU6 1659 aa8.42□□□□□ -1.06
SCARNA6.1-201ENST00000516989 UGGT1Q9NYU2 1555 aa8.41□□□□□ -1.06
SCARNA6.1-201ENST00000516989 PLA2R1Q13018 1463 aa8.41□□□□□ -1.06
SCARNA6.1-201ENST00000516989 C19orf67A6NJJ6 358 aa8.41□□□□□ -1.06
SCARNA6.1-201ENST00000516989 DPYSL4O14531 572 aa8.41□□□□□ -1.06
SCARNA6.1-201ENST00000516989 LTKP29376 864 aa8.41□□□□□ -1.06
SCARNA6.1-201ENST00000516989 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
SCARNA6.1-201ENST00000516989 EMILIN3Q9NT22 766 aa8.41□□□□□ -1.06
SCARNA6.1-201ENST00000516989 CEP170BQ9Y4F5 1589 aaPredicted RBP8.4□□□□□ -1.06
SCARNA6.1-201ENST00000516989 CCDC144AA2RUR9 1427 aa8.4□□□□□ -1.06
SCARNA6.1-201ENST00000516989 ANKRD30BQ9BXX2 1392 aa8.4□□□□□ -1.06
SCARNA6.1-201ENST00000516989 TMEM2Q9UHN6 1383 aa8.4□□□□□ -1.06
SCARNA6.1-201ENST00000516989 SPDYE16A6NNV3 312 aaPredicted RBP8.4□□□□□ -1.06
SCARNA6.1-201ENST00000516989 DSG2Q14126 1118 aa8.4□□□□□ -1.06
SCARNA6.1-201ENST00000516989 DPY19L2Q6NUT2 758 aa8.4□□□□□ -1.06
SCARNA6.1-201ENST00000516989 SIN3AQ96ST3 1273 aa8.4□□□□□ -1.06
SCARNA6.1-201ENST00000516989 MYO3AQ8NEV4 1616 aa8.4□□□□□ -1.07
SCARNA6.1-201ENST00000516989 SYNMO15061 1565 aa8.39□□□□□ -1.07
SCARNA6.1-201ENST00000516989 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCARNA6.1-201ENST00000516989 GPBP1L1Q9HC44 474 aaPredicted RBP8.39□□□□□ -1.07
SCARNA6.1-201ENST00000516989 BMP2KQ9NSY1 1161 aaPredicted RBP8.39□□□□□ -1.07
SCARNA6.1-201ENST00000516989 DHX57Q6P158 1386 aaKnown RBP8.38□□□□□ -1.07
SCARNA6.1-201ENST00000516989 CCER1Q8TC90 406 aaPredicted RBP8.38□□□□□ -1.07
SCARNA6.1-201ENST00000516989 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
SCARNA6.1-201ENST00000516989 PIK3C2BO00750 1634 aa8.37□□□□□ -1.07
SCARNA6.1-201ENST00000516989 RPGRIP1LQ68CZ1 1315 aa8.37□□□□□ -1.07
SCARNA6.1-201ENST00000516989 PDIA6Q15084 440 aa8.37□□□□□ -1.07
SCARNA6.1-201ENST00000516989 TMC2Q8TDI7 906 aa8.37□□□□□ -1.07
SCARNA6.1-201ENST00000516989 SLC26A8Q96RN1 970 aa8.37□□□□□ -1.07
SCARNA6.1-201ENST00000516989 TRPM2O94759 1503 aa8.37□□□□□ -1.07
SCARNA6.1-201ENST00000516989 RIMS2Q9UQ26 1411 aa8.37□□□□□ -1.07
SCARNA6.1-201ENST00000516989 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
SCARNA6.1-201ENST00000516989 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
SCARNA6.1-201ENST00000516989 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
SCARNA6.1-201ENST00000516989 SPHKAPQ2M3C7 1700 aa8.36□□□□□ -1.07
SCARNA6.1-201ENST00000516989 ADGRB3O60242 1522 aa8.35□□□□□ -1.07
SCARNA6.1-201ENST00000516989 TRIM66O15016 1216 aa8.35□□□□□ -1.07
SCARNA6.1-201ENST00000516989 FOXK1P85037 733 aa8.35□□□□□ -1.07
SCARNA6.1-201ENST00000516989 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
SCARNA6.1-201ENST00000516989 UBR1Q8IWV7 1749 aa8.34□□□□□ -1.07
SCARNA6.1-201ENST00000516989 SCAF11Q99590 1463 aaKnown RBP8.34□□□□□ -1.07
SCARNA6.1-201ENST00000516989 TMEM131LA2VDJ0 1609 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms