RNA–Protein interactions for RNA: ENST00000516488.1

RNU6-875P-201, Transcript of RNA, U6 small nuclear 875, pseudogene, humanhuman

BASIC

Gene RNU6-875P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-875P-201ENST00000516488 SMPD1P17405 629 aa9.14□□□□□ -0.95
RNU6-875P-201ENST00000516488 DAXXQ9UER7 740 aaPredicted RBP9.14□□□□□ -0.95
RNU6-875P-201ENST00000516488 VEGFBP49765 207 aa9.13□□□□□ -0.95
RNU6-875P-201ENST00000516488 RDH13Q8NBN7 331 aa9.13□□□□□ -0.95
RNU6-875P-201ENST00000516488 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
RNU6-875P-201ENST00000516488 IRF7Q92985 503 aa9.12□□□□□ -0.95
RNU6-875P-201ENST00000516488 NXF1Q9UBU9 619 aaKnown RBP9.12□□□□□ -0.95
RNU6-875P-201ENST00000516488 DDX11L8A8MPP1 907 aa9.11□□□□□ -0.95
RNU6-875P-201ENST00000516488 J3QL48 77 aa9.1□□□□□ -0.95
RNU6-875P-201ENST00000516488 GPR37O15354 613 aa9.1□□□□□ -0.95
RNU6-875P-201ENST00000516488 KCTD17Q8N5Z5 321 aa9.1□□□□□ -0.95
RNU6-875P-201ENST00000516488 SNIP1Q8TAD8 396 aaKnown RBP9.1□□□□□ -0.95
RNU6-875P-201ENST00000516488 NLRP7Q8WX94 980 aa9.09□□□□□ -0.95
RNU6-875P-201ENST00000516488 ZBTB24O43167 697 aaPredicted RBP9.08□□□□□ -0.96
RNU6-875P-201ENST00000516488 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
RNU6-875P-201ENST00000516488 FUT2Q10981 343 aa9.08□□□□□ -0.96
RNU6-875P-201ENST00000516488 MORN1Q5T089 497 aa9.08□□□□□ -0.96
RNU6-875P-201ENST00000516488 HPS1Q92902 700 aa9.08□□□□□ -0.96
RNU6-875P-201ENST00000516488 SULF1Q8IWU6 871 aa9.07□□□□□ -0.96
RNU6-875P-201ENST00000516488 WNT7AO00755 349 aa9.05□□□□□ -0.96
RNU6-875P-201ENST00000516488 FMNL1O95466 1100 aaPredicted RBP9.05□□□□□ -0.96
RNU6-875P-201ENST00000516488 GCGRP47871 477 aa9.05□□□□□ -0.96
RNU6-875P-201ENST00000516488 THAP11Q96EK4 314 aa9.05□□□□□ -0.96
RNU6-875P-201ENST00000516488 MRGPRX2Q96LB1 330 aa9.05□□□□□ -0.96
RNU6-875P-201ENST00000516488 PRDM9Q9NQV7 894 aa9.05□□□□□ -0.96
RNU6-875P-201ENST00000516488 PHOX2BQ99453 314 aa9.04□□□□□ -0.96
RNU6-875P-201ENST00000516488 SLC27A5Q9Y2P5 690 aa9.04□□□□□ -0.96
RNU6-875P-201ENST00000516488 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
RNU6-875P-201ENST00000516488 GPIHBP1Q8IV16 184 aa9.03□□□□□ -0.96
RNU6-875P-201ENST00000516488 FAM160A2Q8N612 972 aaPredicted RBP9.02□□□□□ -0.97
RNU6-875P-201ENST00000516488 SALL2Q9Y467 1007 aaPredicted RBP9.02□□□□□ -0.97
RNU6-875P-201ENST00000516488 H3BM21 787 aa9.01□□□□□ -0.97
RNU6-875P-201ENST00000516488 BMP1P13497 986 aa9□□□□□ -0.97
RNU6-875P-201ENST00000516488 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
RNU6-875P-201ENST00000516488 GRIPAP1Q4V328 841 aa9□□□□□ -0.97
RNU6-875P-201ENST00000516488 BRICD5Q6PL45 260 aa9□□□□□ -0.97
RNU6-875P-201ENST00000516488 NPAS3Q8IXF0 933 aa9□□□□□ -0.97
RNU6-875P-201ENST00000516488 TRIM32Q13049 653 aa8.99□□□□□ -0.97
RNU6-875P-201ENST00000516488 RNF19BQ6ZMZ0 732 aa8.97□□□□□ -0.97
RNU6-875P-201ENST00000516488 KCNMA1Q12791 1236 aa8.96□□□□□ -0.98
RNU6-875P-201ENST00000516488 MSS51Q4VC12 460 aa8.96□□□□□ -0.98
RNU6-875P-201ENST00000516488 REPIN1Q9BWE0 567 aaKnown RBP8.95□□□□□ -0.98
RNU6-875P-201ENST00000516488 Q3C1V9 767 aa8.94□□□□□ -0.98
RNU6-875P-201ENST00000516488 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
RNU6-875P-201ENST00000516488 CD46P15529 392 aa8.93□□□□□ -0.98
RNU6-875P-201ENST00000516488 GSK3AP49840 483 aa8.93□□□□□ -0.98
RNU6-875P-201ENST00000516488 MAP2K5Q13163 448 aa8.93□□□□□ -0.98
RNU6-875P-201ENST00000516488 TMEM151AQ8N4L1 468 aa8.93□□□□□ -0.98
RNU6-875P-201ENST00000516488 TULP1O00294 542 aaPredicted RBP8.92□□□□□ -0.98
RNU6-875P-201ENST00000516488 TRIM46Q7Z4K8 759 aa8.92□□□□□ -0.98
RNU6-875P-201ENST00000516488 IRF6O14896 467 aa8.91□□□□□ -0.98
RNU6-875P-201ENST00000516488 KDM4AO75164 1064 aa8.91□□□□□ -0.98
RNU6-875P-201ENST00000516488 GDF11O95390 407 aa8.91□□□□□ -0.98
RNU6-875P-201ENST00000516488 ALDH1A1P00352 501 aa8.91□□□□□ -0.98
RNU6-875P-201ENST00000516488 MMP16P51512 607 aa8.9□□□□□ -0.98
RNU6-875P-201ENST00000516488 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.98
RNU6-875P-201ENST00000516488 MDM2Q00987 491 aaPredicted RBP8.89□□□□□ -0.99
RNU6-875P-201ENST00000516488 MINK1Q8N4C8 1332 aaPredicted RBP8.88□□□□□ -0.99
RNU6-875P-201ENST00000516488 CAPN5O15484 640 aaPredicted RBP8.87□□□□□ -0.99
RNU6-875P-201ENST00000516488 USP46P62068 366 aa8.87□□□□□ -0.99
RNU6-875P-201ENST00000516488 RASSF7Q02833 373 aa8.87□□□□□ -0.99
RNU6-875P-201ENST00000516488 RC3H1Q5TC82 1133 aaKnown RBP8.87□□□□□ -0.99
RNU6-875P-201ENST00000516488 DXOO77932 396 aaKnown RBP8.86□□□□□ -0.99
RNU6-875P-201ENST00000516488 XP32Q5T750 250 aa8.86□□□□□ -0.99
RNU6-875P-201ENST00000516488 HLA-CQ95604 372 aa8.86□□□□□ -0.99
RNU6-875P-201ENST00000516488 CCDC24Q8N4L8 307 aa8.85□□□□□ -0.99
RNU6-875P-201ENST00000516488 ZFP42Q96MM3 310 aa8.84□□□□□ -0.99
RNU6-875P-201ENST00000516488 HOXA2O43364 376 aa8.83□□□□□ -1
RNU6-875P-201ENST00000516488 SKOR1P84550 965 aa8.83□□□□□ -1
RNU6-875P-201ENST00000516488 GPAT2Q6NUI2 795 aa8.83□□□□□ -1
RNU6-875P-201ENST00000516488 CCDC102AQ96A19 550 aa8.83□□□□□ -1
RNU6-875P-201ENST00000516488 VSIG10Q8N0Z9 540 aa8.82□□□□□ -1
RNU6-875P-201ENST00000516488 GPCPD1Q9NPB8 672 aa8.82□□□□□ -1
RNU6-875P-201ENST00000516488 WASF2Q9Y6W5 498 aa8.82□□□□□ -1
RNU6-875P-201ENST00000516488 RNF225M0QZC1 329 aaPredicted RBP8.81□□□□□ -1
RNU6-875P-201ENST00000516488 CLCN1P35523 988 aa8.81□□□□□ -1
RNU6-875P-201ENST00000516488 GUCA2AQ02747 115 aa8.81□□□□□ -1
RNU6-875P-201ENST00000516488 KRI1Q8N9T8 703 aaKnown RBP8.81□□□□□ -1
RNU6-875P-201ENST00000516488 SOBPA7XYQ1 873 aa8.8□□□□□ -1
RNU6-875P-201ENST00000516488 VSIG8P0DPA2 414 aa8.8□□□□□ -1
RNU6-875P-201ENST00000516488 NUTM1Q86Y26 1132 aa8.8□□□□□ -1
RNU6-875P-201ENST00000516488 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
RNU6-875P-201ENST00000516488 WNT7BP56706 349 aa8.79□□□□□ -1
RNU6-875P-201ENST00000516488 SYMPKQ92797 1274 aaKnown RBP8.79□□□□□ -1
RNU6-875P-201ENST00000516488 JUNDP17535 347 aa8.78□□□□□ -1
RNU6-875P-201ENST00000516488 RETREG3Q86VR2 466 aa8.76□□□□□ -1.01
RNU6-875P-201ENST00000516488 EHBP1Q8NDI1 1231 aa8.76□□□□□ -1.01
RNU6-875P-201ENST00000516488 FDX1P10109 184 aa8.74□□□□□ -1.01
RNU6-875P-201ENST00000516488 PURBQ96QR8 312 aaKnown RBP8.74□□□□□ -1.01
RNU6-875P-201ENST00000516488 NUDT12Q9BQG2 462 aa8.74□□□□□ -1.01
RNU6-875P-201ENST00000516488 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
RNU6-875P-201ENST00000516488 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
RNU6-875P-201ENST00000516488 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.73□□□□□ -1.01
RNU6-875P-201ENST00000516488 C6orf229H3BNL8 230 aa8.72□□□□□ -1.01
RNU6-875P-201ENST00000516488 SSTR3P32745 418 aaPredicted RBP8.72□□□□□ -1.01
RNU6-875P-201ENST00000516488 PCDHGC3Q9UN70 934 aa8.72□□□□□ -1.01
RNU6-875P-201ENST00000516488 SCARF1Q14162 830 aa8.71□□□□□ -1.02
RNU6-875P-201ENST00000516488 MRPL14Q6P1L8 145 aaKnown RBP8.71□□□□□ -1.02
RNU6-875P-201ENST00000516488 DNMT3AQ9Y6K1 912 aaPredicted RBP8.71□□□□□ -1.02
RNU6-875P-201ENST00000516488 SIAH2O43255 324 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms