RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 NDUFB9Q9Y6M9 179 aa6.24□□□□□ -1.41
RNU6-390P-201ENST00000516259 FAM205CA6NFA0 338 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 ARID3CA6NKF2 412 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 CSPP1Q1MSJ5 1256 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 MORN1Q5T089 497 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 ADGRD1Q6QNK2 874 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 RETREG3Q86VR2 466 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 CCDC82Q8N4S0 544 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 LRCH3Q96II8 777 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 HS3ST6Q96QI5 342 aa6.23□□□□□ -1.41
RNU6-390P-201ENST00000516259 CCDC97Q96F63 343 aaPredicted RBP6.22□□□□□ -1.41
RNU6-390P-201ENST00000516259 GDPD2Q9HCC8 539 aa6.22□□□□□ -1.41
RNU6-390P-201ENST00000516259 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.22□□□□□ -1.41
RNU6-390P-201ENST00000516259 ZNF777Q9ULD5 760 aaPredicted RBP6.22□□□□□ -1.41
RNU6-390P-201ENST00000516259 MARVELD3Q96A59 401 aa6.21□□□□□ -1.42
RNU6-390P-201ENST00000516259 TRIM34Q9BYJ4 488 aa6.21□□□□□ -1.42
RNU6-390P-201ENST00000516259 POTEB3A0JP26 581 aa6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 SOWAHBA6NEL2 793 aa6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 CFAP99D6REC4 459 aa6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 PPP1R15AO75807 674 aaPredicted RBP6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 SOX11P35716 441 aa6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 CTDSPL2Q05D32 466 aa6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 POTEBQ6S5H4 581 aa6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 ANKK1Q8NFD2 765 aa6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 TBC1D2BQ9UPU7 963 aa6.2□□□□□ -1.42
RNU6-390P-201ENST00000516259 C6orf229H3BNL8 230 aa6.19□□□□□ -1.42
RNU6-390P-201ENST00000516259 GUCA2AQ02747 115 aa6.19□□□□□ -1.42
RNU6-390P-201ENST00000516259 PNMA1Q8ND90 353 aa6.19□□□□□ -1.42
RNU6-390P-201ENST00000516259 GPR37L1O60883 481 aa6.18□□□□□ -1.42
RNU6-390P-201ENST00000516259 IRF5Q13568 498 aa6.18□□□□□ -1.42
RNU6-390P-201ENST00000516259 LYPD8Q6UX82 237 aa6.18□□□□□ -1.42
RNU6-390P-201ENST00000516259 NYAP1Q6ZVC0 841 aa6.18□□□□□ -1.42
RNU6-390P-201ENST00000516259 PRR7Q8TB68 274 aa6.18□□□□□ -1.42
RNU6-390P-201ENST00000516259 HLA-CQ95604 372 aa6.18□□□□□ -1.42
RNU6-390P-201ENST00000516259 TSR3Q9UJK0 312 aaKnown RBP6.18□□□□□ -1.42
RNU6-390P-201ENST00000516259 SLC27A5Q9Y2P5 690 aa6.18□□□□□ -1.42
RNU6-390P-201ENST00000516259 ABL2P42684 1182 aa6.17□□□□□ -1.42
RNU6-390P-201ENST00000516259 PPP4CP60510 307 aa6.17□□□□□ -1.42
RNU6-390P-201ENST00000516259 BRICD5Q6PL45 260 aa6.17□□□□□ -1.42
RNU6-390P-201ENST00000516259 ZC3H4Q9UPT8 1303 aaKnown RBP6.17□□□□□ -1.42
RNU6-390P-201ENST00000516259 NR1I2O75469 434 aa6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 PDE4CQ08493 712 aa6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 THAP11Q96EK4 314 aa6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 FAM163AQ96GL9 167 aaPredicted RBP6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 CALR3Q96L12 384 aaKnown RBP6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 STAC3Q96MF2 364 aa6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 ARID3AQ99856 593 aa6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 USB1Q9BQ65 265 aaKnown RBP6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 HMX1Q9NP08 348 aaPredicted RBP6.16□□□□□ -1.42
RNU6-390P-201ENST00000516259 GOLGA8CPA6NN73 597 aa6.15□□□□□ -1.42
RNU6-390P-201ENST00000516259 LRRN4Q8WUT4 740 aa6.15□□□□□ -1.42
RNU6-390P-201ENST00000516259 GLMNQ92990 594 aa6.15□□□□□ -1.42
RNU6-390P-201ENST00000516259 FMNL1O95466 1100 aaPredicted RBP6.14□□□□□ -1.43
RNU6-390P-201ENST00000516259 MSS51Q4VC12 460 aa6.14□□□□□ -1.43
RNU6-390P-201ENST00000516259 SCUBE3Q8IX30 993 aa6.14□□□□□ -1.43
RNU6-390P-201ENST00000516259 TRAIPQ9BWF2 469 aa6.14□□□□□ -1.43
RNU6-390P-201ENST00000516259 ALG2Q9H553 416 aa6.14□□□□□ -1.43
RNU6-390P-201ENST00000516259 RNF40O75150 1001 aa6.13□□□□□ -1.43
RNU6-390P-201ENST00000516259 PDIA4P13667 645 aaKnown RBP6.13□□□□□ -1.43
RNU6-390P-201ENST00000516259 PTPRNQ16849 979 aa6.13□□□□□ -1.43
RNU6-390P-201ENST00000516259 ZNF592Q92610 1267 aa6.13□□□□□ -1.43
RNU6-390P-201ENST00000516259 HPS5Q9UPZ3 1129 aa6.13□□□□□ -1.43
RNU6-390P-201ENST00000516259 PCDHB3Q9Y5E6 796 aa6.13□□□□□ -1.43
RNU6-390P-201ENST00000516259 POM121CA8CG34 1229 aa6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 F12P00748 615 aaPredicted RBP6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 JUNDP17535 347 aa6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 APLP1P51693 650 aa6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 MCCD1P59942 119 aaPredicted RBP6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 SYMPKQ92797 1274 aaKnown RBP6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 GPKOWQ92917 476 aaPredicted RBP eCLIP6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 WNT2BQ93097 391 aa6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 GPSM3Q9Y4H4 160 aa6.12□□□□□ -1.43
RNU6-390P-201ENST00000516259 PER1O15534 1290 aaPredicted RBP6.11□□□□□ -1.43
RNU6-390P-201ENST00000516259 MMP16P51512 607 aa6.11□□□□□ -1.43
RNU6-390P-201ENST00000516259 PUS10Q3MIT2 529 aaKnown RBP6.11□□□□□ -1.43
RNU6-390P-201ENST00000516259 HDGFL1Q5TGJ6 251 aa6.11□□□□□ -1.43
RNU6-390P-201ENST00000516259 BLOC1S3Q6QNY0 202 aa6.11□□□□□ -1.43
RNU6-390P-201ENST00000516259 DXOO77932 396 aaKnown RBP6.1□□□□□ -1.43
RNU6-390P-201ENST00000516259 EIF4G2P78344 907 aaKnown RBP eCLIP6.1□□□□□ -1.43
RNU6-390P-201ENST00000516259 NR6A1Q15406 480 aa6.1□□□□□ -1.43
RNU6-390P-201ENST00000516259 RNF19BQ6ZMZ0 732 aa6.1□□□□□ -1.43
RNU6-390P-201ENST00000516259 ANKRD13DQ6ZTN6 518 aa6.1□□□□□ -1.43
RNU6-390P-201ENST00000516259 ARMC2Q8NEN0 867 aa6.1□□□□□ -1.43
RNU6-390P-201ENST00000516259 ADAMTS19Q8TE59 1207 aa6.1□□□□□ -1.43
RNU6-390P-201ENST00000516259 TSC1Q92574 1164 aa6.1□□□□□ -1.43
RNU6-390P-201ENST00000516259 ACIN1Q9UKV3 1341 aaKnown RBP6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 BCAMP50895 628 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 SRPK2P78362 688 aaKnown RBP6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 NR1H3Q13133 447 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 THSD4Q6ZMP0 1018 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 KCTD17Q8N5Z5 321 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 NFATC2IPQ8NCF5 419 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 EPS8L1Q8TE68 723 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 PBXIP1Q96AQ6 731 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 EVA1BQ9NVM1 165 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 FKBPLQ9UIM3 349 aa6.09□□□□□ -1.43
RNU6-390P-201ENST00000516259 PPP1R12CQ9BZL4 782 aa6.08□□□□□ -1.44
RNU6-390P-201ENST00000516259 MYT1LQ9UL68 1186 aa6.08□□□□□ -1.44
RNU6-390P-201ENST00000516259 ZBBXA8MT70 800 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms