RNA–Protein interactions for RNA: ENST00000516098.1

RNU6-240P-201, Transcript of RNA, U6 small nuclear 240, pseudogene, humanhuman

BASIC

Gene RNU6-240P, Length 97 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-240P-201ENST00000516098 HIC1Q14526 733 aa4.15□□□□□ -1.75
RNU6-240P-201ENST00000516098 BRICD5Q6PL45 260 aa4.15□□□□□ -1.75
RNU6-240P-201ENST00000516098 PRDM9Q9NQV7 894 aa4.15□□□□□ -1.75
RNU6-240P-201ENST00000516098 SLC27A5Q9Y2P5 690 aa4.15□□□□□ -1.75
RNU6-240P-201ENST00000516098 Q3C1V9 767 aa4.14□□□□□ -1.75
RNU6-240P-201ENST00000516098 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
RNU6-240P-201ENST00000516098 ZSCAN1Q8NBB4 408 aa4.14□□□□□ -1.75
RNU6-240P-201ENST00000516098 MRGPRX2Q96LB1 330 aa4.14□□□□□ -1.75
RNU6-240P-201ENST00000516098 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 DDX11L8A8MPP1 907 aa4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 GCGRP47871 477 aa4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 MMP16P51512 607 aa4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 P3H3Q8IVL6 736 aa4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 KCNV2Q8TDN2 545 aa4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 IRF7Q92985 503 aa4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 NXF1Q9UBU9 619 aaKnown RBP4.13□□□□□ -1.75
RNU6-240P-201ENST00000516098 J3QL48 77 aa4.12□□□□□ -1.75
RNU6-240P-201ENST00000516098 FECHP22830 423 aa4.12□□□□□ -1.75
RNU6-240P-201ENST00000516098 WNT7BP56706 349 aa4.12□□□□□ -1.75
RNU6-240P-201ENST00000516098 HPS1Q92902 700 aa4.12□□□□□ -1.75
RNU6-240P-201ENST00000516098 RNF19BQ6ZMZ0 732 aa4.11□□□□□ -1.75
RNU6-240P-201ENST00000516098 GNPATO15228 680 aa4.1□□□□□ -1.75
RNU6-240P-201ENST00000516098 DXOO77932 396 aaKnown RBP4.1□□□□□ -1.75
RNU6-240P-201ENST00000516098 GMPRP36959 345 aa4.1□□□□□ -1.75
RNU6-240P-201ENST00000516098 RC3H1Q5TC82 1133 aaKnown RBP4.09□□□□□ -1.75
RNU6-240P-201ENST00000516098 SMYD5Q6GMV2 418 aa4.09□□□□□ -1.75
RNU6-240P-201ENST00000516098 USB1Q9BQ65 265 aaKnown RBP4.09□□□□□ -1.75
RNU6-240P-201ENST00000516098 H3BM21 787 aa4.08□□□□□ -1.76
RNU6-240P-201ENST00000516098 LORP23490 312 aaPredicted RBP4.08□□□□□ -1.76
RNU6-240P-201ENST00000516098 ALDH1A1P00352 501 aa4.07□□□□□ -1.76
RNU6-240P-201ENST00000516098 SEMA3EO15041 775 aa4.06□□□□□ -1.76
RNU6-240P-201ENST00000516098 CAPN5O15484 640 aaPredicted RBP4.06□□□□□ -1.76
RNU6-240P-201ENST00000516098 USP46P62068 366 aa4.06□□□□□ -1.76
RNU6-240P-201ENST00000516098 SKOR1P84550 965 aa4.06□□□□□ -1.76
RNU6-240P-201ENST00000516098 TRIM46Q7Z4K8 759 aa4.06□□□□□ -1.76
RNU6-240P-201ENST00000516098 CCDC24Q8N4L8 307 aa4.06□□□□□ -1.76
RNU6-240P-201ENST00000516098 WASF2Q9Y6W5 498 aa4.06□□□□□ -1.76
RNU6-240P-201ENST00000516098 CD46P15529 392 aa4.05□□□□□ -1.76
RNU6-240P-201ENST00000516098 SUZ12Q15022 739 aaKnown RBP4.05□□□□□ -1.76
RNU6-240P-201ENST00000516098 EHBP1Q8NDI1 1231 aa4.05□□□□□ -1.76
RNU6-240P-201ENST00000516098 GPR37O15354 613 aa4.04□□□□□ -1.76
RNU6-240P-201ENST00000516098 SIAH2O43255 324 aa4.04□□□□□ -1.76
RNU6-240P-201ENST00000516098 KDM4AO75164 1064 aa4.04□□□□□ -1.76
RNU6-240P-201ENST00000516098 VSIG8P0DPA2 414 aa4.04□□□□□ -1.76
RNU6-240P-201ENST00000516098 BMP1P13497 986 aa4.04□□□□□ -1.76
RNU6-240P-201ENST00000516098 JUNDP17535 347 aa4.04□□□□□ -1.76
RNU6-240P-201ENST00000516098 ERBB4Q15303 1308 aa4.03□□□□□ -1.76
RNU6-240P-201ENST00000516098 TESPA1A2RU30 521 aaPredicted RBP4.03□□□□□ -1.76
RNU6-240P-201ENST00000516098 VEGFBP49765 207 aa4.03□□□□□ -1.76
RNU6-240P-201ENST00000516098 KCNMA1Q12791 1236 aa4.03□□□□□ -1.76
RNU6-240P-201ENST00000516098 AMER1Q5JTC6 1135 aaPredicted RBP4.03□□□□□ -1.76
RNU6-240P-201ENST00000516098 RBM26Q5T8P6 1007 aaKnown RBP4.03□□□□□ -1.76
RNU6-240P-201ENST00000516098 NLRP7Q8WX94 980 aa4.03□□□□□ -1.76
RNU6-240P-201ENST00000516098 PLEKHG3A1L390 1219 aa4.02□□□□□ -1.77
RNU6-240P-201ENST00000516098 SCARF1Q14162 830 aa4.02□□□□□ -1.77
RNU6-240P-201ENST00000516098 ZFP42Q96MM3 310 aa4.02□□□□□ -1.77
RNU6-240P-201ENST00000516098 PHOX2BQ99453 314 aa4.02□□□□□ -1.77
RNU6-240P-201ENST00000516098 NUDT12Q9BQG2 462 aa4.02□□□□□ -1.77
RNU6-240P-201ENST00000516098 RNF225M0QZC1 329 aaPredicted RBP4.01□□□□□ -1.77
RNU6-240P-201ENST00000516098 HOXA2O43364 376 aa4.01□□□□□ -1.77
RNU6-240P-201ENST00000516098 RETREG3Q86VR2 466 aa4.01□□□□□ -1.77
RNU6-240P-201ENST00000516098 MPNDQ8N594 471 aa4.01□□□□□ -1.77
RNU6-240P-201ENST00000516098 TSHZ2Q9NRE2 1034 aa4.01□□□□□ -1.77
RNU6-240P-201ENST00000516098 MRPL14Q6P1L8 145 aaKnown RBP4□□□□□ -1.77
RNU6-240P-201ENST00000516098 ADH1CP00326 375 aa3.99□□□□□ -1.77
RNU6-240P-201ENST00000516098 CCNYL3P0C7X3 344 aa3.99□□□□□ -1.77
RNU6-240P-201ENST00000516098 SH3BP2P78314 561 aa3.99□□□□□ -1.77
RNU6-240P-201ENST00000516098 GPIHBP1Q8IV16 184 aa3.99□□□□□ -1.77
RNU6-240P-201ENST00000516098 MS4A1P11836 297 aa3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 VARSP26640 1264 aaKnown RBP3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 MAP2K5Q13163 448 aa3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 NNTQ13423 1086 aa3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 PTPRNQ16849 979 aa3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 PTCRAQ6ISU1 281 aaPredicted RBP3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 TMEM151AQ8N4L1 468 aa3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 KCTD17Q8N5Z5 321 aa3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 PURBQ96QR8 312 aaKnown RBP3.98□□□□□ -1.77
RNU6-240P-201ENST00000516098 TIMP2P16035 220 aa3.97□□□□□ -1.77
RNU6-240P-201ENST00000516098 HLA-CQ95604 372 aa3.97□□□□□ -1.77
RNU6-240P-201ENST00000516098 UNC93B1Q9H1C4 597 aa3.97□□□□□ -1.77
RNU6-240P-201ENST00000516098 TLL2Q9Y6L7 1015 aa3.97□□□□□ -1.77
RNU6-240P-201ENST00000516098 GDF11O95390 407 aa3.96□□□□□ -1.78
RNU6-240P-201ENST00000516098 GSK3AP49840 483 aa3.96□□□□□ -1.78
RNU6-240P-201ENST00000516098 WDR4P57081 412 aaKnown RBP3.96□□□□□ -1.78
RNU6-240P-201ENST00000516098 RASSF7Q02833 373 aa3.96□□□□□ -1.78
RNU6-240P-201ENST00000516098 NUTM1Q86Y26 1132 aa3.96□□□□□ -1.78
RNU6-240P-201ENST00000516098 MAN1A2O60476 641 aa3.95□□□□□ -1.78
RNU6-240P-201ENST00000516098 UPP2O95045 317 aa3.95□□□□□ -1.78
RNU6-240P-201ENST00000516098 IGHA1P01876 353 aa3.95□□□□□ -1.78
RNU6-240P-201ENST00000516098 GUCA2AQ02747 115 aa3.95□□□□□ -1.78
RNU6-240P-201ENST00000516098 KCNH2Q12809 1159 aa3.95□□□□□ -1.78
RNU6-240P-201ENST00000516098 ZNF511Q8NB15 262 aa3.95□□□□□ -1.78
RNU6-240P-201ENST00000516098 FAM174AQ8TBP5 190 aa3.95□□□□□ -1.78
RNU6-240P-201ENST00000516098 EVA1BQ9NVM1 165 aa3.95□□□□□ -1.78
RNU6-240P-201ENST00000516098 C6orf229H3BNL8 230 aa3.94□□□□□ -1.78
RNU6-240P-201ENST00000516098 PPFIA3O75145 1194 aa3.94□□□□□ -1.78
RNU6-240P-201ENST00000516098 FDX1P10109 184 aa3.94□□□□□ -1.78
RNU6-240P-201ENST00000516098 CLCN1P35523 988 aa3.94□□□□□ -1.78
RNU6-240P-201ENST00000516098 MDM2Q00987 491 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms