RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 SIRT1Q96EB6 747 aa19.15■□□□□ 0.66
ABCC3-216ENST00000515585 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.65
ABCC3-216ENST00000515585 CDCA8Q53HL2 280 aa19.13■□□□□ 0.65
ABCC3-216ENST00000515585 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
ABCC3-216ENST00000515585 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
ABCC3-216ENST00000515585 ADGRB2O60241 1585 aa19.12■□□□□ 0.65
ABCC3-216ENST00000515585 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
ABCC3-216ENST00000515585 TBX22Q9Y458 520 aa19.12■□□□□ 0.65
ABCC3-216ENST00000515585 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
ABCC3-216ENST00000515585 PTCH1Q13635 1447 aa19.08■□□□□ 0.65
ABCC3-216ENST00000515585 PER1O15534 1290 aaPredicted RBP19.08■□□□□ 0.64
ABCC3-216ENST00000515585 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.08■□□□□ 0.64
ABCC3-216ENST00000515585 PLEKHH1Q9ULM0 1364 aa19.06■□□□□ 0.64
ABCC3-216ENST00000515585 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
ABCC3-216ENST00000515585 STK26Q9P289 416 aa19.06■□□□□ 0.64
ABCC3-216ENST00000515585 USP32Q8NFA0 1604 aa19.06■□□□□ 0.64
ABCC3-216ENST00000515585 CCER2I3L3R5 266 aa19.05■□□□□ 0.64
ABCC3-216ENST00000515585 ANP32CO43423 234 aa19.05■□□□□ 0.64
ABCC3-216ENST00000515585 NWD1Q149M9 1564 aa19.05■□□□□ 0.64
ABCC3-216ENST00000515585 ROBO2Q9HCK4 1378 aa19.05■□□□□ 0.64
ABCC3-216ENST00000515585 ANKLE2Q86XL3 938 aa19.04■□□□□ 0.64
ABCC3-216ENST00000515585 NPHP4O75161 1426 aaPredicted RBP19.03■□□□□ 0.64
ABCC3-216ENST00000515585 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
ABCC3-216ENST00000515585 PRKRIP1Q9H875 184 aaPredicted RBP19.03■□□□□ 0.64
ABCC3-216ENST00000515585 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
ABCC3-216ENST00000515585 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
ABCC3-216ENST00000515585 RGS17Q9UGC6 210 aaPredicted RBP19.02■□□□□ 0.64
ABCC3-216ENST00000515585 SLC26A8Q96RN1 970 aa19.01■□□□□ 0.63
ABCC3-216ENST00000515585 KTN1Q86UP2 1357 aaKnown RBP19.01■□□□□ 0.63
ABCC3-216ENST00000515585 NPC1L1Q9UHC9 1359 aa19.01■□□□□ 0.63
ABCC3-216ENST00000515585 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
ABCC3-216ENST00000515585 NINLQ9Y2I6 1382 aa19■□□□□ 0.63
ABCC3-216ENST00000515585 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
ABCC3-216ENST00000515585 PANK3Q9H999 370 aa18.99■□□□□ 0.63
ABCC3-216ENST00000515585 PARD3Q8TEW0 1356 aa18.98■□□□□ 0.63
ABCC3-216ENST00000515585 POGKQ9P215 609 aa18.98■□□□□ 0.63
ABCC3-216ENST00000515585 ATAD2Q6PL18 1390 aa18.97■□□□□ 0.63
ABCC3-216ENST00000515585 CD163L1Q9NR16 1453 aa18.97■□□□□ 0.63
ABCC3-216ENST00000515585 MINK1Q8N4C8 1332 aaPredicted RBP18.96■□□□□ 0.63
ABCC3-216ENST00000515585 AKAP12Q02952 1782 aa18.96■□□□□ 0.63
ABCC3-216ENST00000515585 NALCNQ8IZF0 1738 aa18.95■□□□□ 0.62
ABCC3-216ENST00000515585 BCANQ96GW7 911 aa18.95■□□□□ 0.62
ABCC3-216ENST00000515585 AMOTL2Q9Y2J4 779 aa18.95■□□□□ 0.62
ABCC3-216ENST00000515585 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
ABCC3-216ENST00000515585 ATP7BP35670 1465 aa18.94■□□□□ 0.62
ABCC3-216ENST00000515585 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
ABCC3-216ENST00000515585 AMER1Q5JTC6 1135 aaPredicted RBP18.93■□□□□ 0.62
ABCC3-216ENST00000515585 MON2Q7Z3U7 1717 aa18.93■□□□□ 0.62
ABCC3-216ENST00000515585 FMN2Q9NZ56 1722 aa18.93■□□□□ 0.62
ABCC3-216ENST00000515585 ANKRD26Q9UPS8 1709 aa18.93■□□□□ 0.62
ABCC3-216ENST00000515585 STRCP1A6NGW2 1772 aa18.93■□□□□ 0.62
ABCC3-216ENST00000515585 ITSN1Q15811 1721 aa18.92■□□□□ 0.62
ABCC3-216ENST00000515585 CDK19Q9BWU1 502 aa18.92■□□□□ 0.62
ABCC3-216ENST00000515585 CABP2Q9NPB3 220 aa18.92■□□□□ 0.62
ABCC3-216ENST00000515585 CDC42BPGQ6DT37 1551 aa18.91■□□□□ 0.62
ABCC3-216ENST00000515585 WASLO00401 505 aaPredicted RBP18.91■□□□□ 0.62
ABCC3-216ENST00000515585 RALBP1Q15311 655 aa18.91■□□□□ 0.62
ABCC3-216ENST00000515585 CARD14Q9BXL6 1004 aa18.91■□□□□ 0.62
ABCC3-216ENST00000515585 SLC12A5Q9H2X9 1139 aa18.9■□□□□ 0.62
ABCC3-216ENST00000515585 NKTRP30414 1462 aaKnown RBP18.9■□□□□ 0.62
ABCC3-216ENST00000515585 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
ABCC3-216ENST00000515585 KCNA6P17658 529 aa18.88■□□□□ 0.61
ABCC3-216ENST00000515585 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
ABCC3-216ENST00000515585 KIF20BQ96Q89 1820 aa18.88■□□□□ 0.61
ABCC3-216ENST00000515585 A0A1W2PP64 1363 aa18.87■□□□□ 0.61
ABCC3-216ENST00000515585 CPSF1Q10570 1443 aaKnown RBP18.87■□□□□ 0.61
ABCC3-216ENST00000515585 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
ABCC3-216ENST00000515585 NSD3Q9BZ95 1437 aa18.86■□□□□ 0.61
ABCC3-216ENST00000515585 SRPK2P78362 688 aaKnown RBP18.86■□□□□ 0.61
ABCC3-216ENST00000515585 PRR36Q9H6K5 1346 aa18.85■□□□□ 0.61
ABCC3-216ENST00000515585 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
ABCC3-216ENST00000515585 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
ABCC3-216ENST00000515585 MYBBP1AQ9BQG0 1328 aaKnown RBP18.84■□□□□ 0.61
ABCC3-216ENST00000515585 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.61
ABCC3-216ENST00000515585 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.61
ABCC3-216ENST00000515585 BRD4O60885 1362 aaPredicted RBP18.83■□□□□ 0.61
ABCC3-216ENST00000515585 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.6
ABCC3-216ENST00000515585 NSD2O96028 1365 aa18.82■□□□□ 0.6
ABCC3-216ENST00000515585 XIRP1Q702N8 1843 aaKnown RBP18.82■□□□□ 0.6
ABCC3-216ENST00000515585 TMC1Q8TDI8 760 aa18.81■□□□□ 0.6
ABCC3-216ENST00000515585 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
ABCC3-216ENST00000515585 LRRC7Q96NW7 1537 aa18.79■□□□□ 0.6
ABCC3-216ENST00000515585 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
ABCC3-216ENST00000515585 NCOA3Q9Y6Q9 1424 aa18.78■□□□□ 0.6
ABCC3-216ENST00000515585 PLEKHG3A1L390 1219 aa18.78■□□□□ 0.6
ABCC3-216ENST00000515585 CC2D1BQ5T0F9 858 aaKnown RBP18.78■□□□□ 0.6
ABCC3-216ENST00000515585 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
ABCC3-216ENST00000515585 CABP1Q9NZU7 370 aa18.78■□□□□ 0.6
ABCC3-216ENST00000515585 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
ABCC3-216ENST00000515585 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
ABCC3-216ENST00000515585 EDC4Q6P2E9 1401 aaKnown RBP18.76■□□□□ 0.59
ABCC3-216ENST00000515585 CGNL1Q0VF96 1302 aa18.75■□□□□ 0.59
ABCC3-216ENST00000515585 SSH2Q76I76 1423 aa18.75■□□□□ 0.59
ABCC3-216ENST00000515585 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
ABCC3-216ENST00000515585 POLR3AO14802 1390 aaPredicted RBP18.75■□□□□ 0.59
ABCC3-216ENST00000515585 PPP2R1AP30153 589 aa18.74■□□□□ 0.59
ABCC3-216ENST00000515585 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
ABCC3-216ENST00000515585 INSRP06213 1382 aa18.72■□□□□ 0.59
ABCC3-216ENST00000515585 PNISRQ8TF01 805 aaKnown RBP18.72■□□□□ 0.59
ABCC3-216ENST00000515585 SHPRHQ149N8 1683 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms