RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ANKRD20A12PQ8NF67 263 aa19.51■□□□□ 0.71
TRIM41-207ENST00000515223 ANO2Q9NQ90 1003 aa19.49■□□□□ 0.71
TRIM41-207ENST00000515223 IPO7O95373 1038 aaKnown RBP19.49■□□□□ 0.71
TRIM41-207ENST00000515223 PRXQ9BXM0 1461 aa19.49■□□□□ 0.71
TRIM41-207ENST00000515223 PROSER2Q86WR7 435 aaPredicted RBP19.48■□□□□ 0.71
TRIM41-207ENST00000515223 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
TRIM41-207ENST00000515223 VSIG10Q8N0Z9 540 aa19.48■□□□□ 0.71
TRIM41-207ENST00000515223 HOOK1Q9UJC3 728 aaKnown RBP19.48■□□□□ 0.71
TRIM41-207ENST00000515223 TIAM1Q13009 1591 aa19.48■□□□□ 0.71
TRIM41-207ENST00000515223 ERC2O15083 957 aa19.48■□□□□ 0.71
TRIM41-207ENST00000515223 PCMTD1Q96MG8 357 aaPredicted RBP19.47■□□□□ 0.71
TRIM41-207ENST00000515223 BRD4O60885 1362 aaPredicted RBP19.47■□□□□ 0.71
TRIM41-207ENST00000515223 CFTRP13569 1480 aa19.46■□□□□ 0.71
TRIM41-207ENST00000515223 DZIP1LQ8IYY4 767 aaKnown RBP19.46■□□□□ 0.71
TRIM41-207ENST00000515223 NEUROD6Q96NK8 337 aa19.46■□□□□ 0.71
TRIM41-207ENST00000515223 SAFBQ15424 915 aaKnown RBP eCLIP19.45■□□□□ 0.7
TRIM41-207ENST00000515223 PANK1Q8TE04 598 aa19.45■□□□□ 0.7
TRIM41-207ENST00000515223 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
TRIM41-207ENST00000515223 R3HCC1Q9Y3T6 440 aaKnown RBP19.45■□□□□ 0.7
TRIM41-207ENST00000515223 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
TRIM41-207ENST00000515223 AIMP1Q12904 312 aaKnown RBP19.45■□□□□ 0.7
TRIM41-207ENST00000515223 ADAMTS8Q9UP79 889 aa19.45■□□□□ 0.7
TRIM41-207ENST00000515223 NUTM2GQ5VZR2 741 aa19.45■□□□□ 0.7
TRIM41-207ENST00000515223 RALYLQ86SE5 291 aaKnown RBP19.45■□□□□ 0.7
TRIM41-207ENST00000515223 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
TRIM41-207ENST00000515223 CCDC70Q6NSX1 233 aa19.44■□□□□ 0.7
TRIM41-207ENST00000515223 TXNDC2Q86VQ3 553 aa19.44■□□□□ 0.7
TRIM41-207ENST00000515223 CCDC27Q2M243 656 aa19.44■□□□□ 0.7
TRIM41-207ENST00000515223 FYCO1Q9BQS8 1478 aa19.44■□□□□ 0.7
TRIM41-207ENST00000515223 BACH2Q9BYV9 841 aa19.44■□□□□ 0.7
TRIM41-207ENST00000515223 DDX49Q9Y6V7 483 aaKnown RBP19.44■□□□□ 0.7
TRIM41-207ENST00000515223 ESCO1Q5FWF5 840 aa19.43■□□□□ 0.7
TRIM41-207ENST00000515223 ABTB2Q8N961 1025 aa19.42■□□□□ 0.7
TRIM41-207ENST00000515223 HMOX1P09601 288 aa19.42■□□□□ 0.7
TRIM41-207ENST00000515223 WASHC4Q2M389 1173 aa19.42■□□□□ 0.7
TRIM41-207ENST00000515223 FOXD4L6Q3SYB3 417 aaPredicted RBP19.41■□□□□ 0.7
TRIM41-207ENST00000515223 FOXD4L3Q6VB84 417 aaPredicted RBP19.41■□□□□ 0.7
TRIM41-207ENST00000515223 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
TRIM41-207ENST00000515223 PNISRQ8TF01 805 aaKnown RBP19.41■□□□□ 0.7
TRIM41-207ENST00000515223 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
TRIM41-207ENST00000515223 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
TRIM41-207ENST00000515223 SKOR2Q2VWA4 1001 aaPredicted RBP19.4■□□□□ 0.7
TRIM41-207ENST00000515223 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
TRIM41-207ENST00000515223 CCAR1Q8IX12 1150 aaKnown RBP19.4■□□□□ 0.7
TRIM41-207ENST00000515223 FYB1O15117 783 aa19.39■□□□□ 0.69
TRIM41-207ENST00000515223 IKQ13123 557 aaPredicted RBP19.39■□□□□ 0.69
TRIM41-207ENST00000515223 HFM1A2PYH4 1435 aa19.39■□□□□ 0.69
TRIM41-207ENST00000515223 UBTFL1P0CB47 393 aaPredicted RBP19.39■□□□□ 0.69
TRIM41-207ENST00000515223 KIF6Q6ZMV9 814 aa19.39■□□□□ 0.69
TRIM41-207ENST00000515223 SKAP1Q86WV1 359 aa19.38■□□□□ 0.69
TRIM41-207ENST00000515223 GAS2L2Q8NHY3 880 aa19.38■□□□□ 0.69
TRIM41-207ENST00000515223 CHMP5Q9NZZ3 219 aa19.38■□□□□ 0.69
TRIM41-207ENST00000515223 RBM42Q9BTD8 480 aaKnown RBP19.38■□□□□ 0.69
TRIM41-207ENST00000515223 TBC1D2BQ9UPU7 963 aa19.38■□□□□ 0.69
TRIM41-207ENST00000515223 C11orf95C9JLR9 678 aaPredicted RBP19.38■□□□□ 0.69
TRIM41-207ENST00000515223 BRMS1Q9HCU9 246 aa19.38■□□□□ 0.69
TRIM41-207ENST00000515223 CCAR2Q8N163 923 aaKnown RBP19.37■□□□□ 0.69
TRIM41-207ENST00000515223 BICD2Q8TD16 824 aa19.37■□□□□ 0.69
TRIM41-207ENST00000515223 STRN4Q9NRL3 753 aa19.37■□□□□ 0.69
TRIM41-207ENST00000515223 CABP2Q9NPB3 220 aa19.37■□□□□ 0.69
TRIM41-207ENST00000515223 XBP1P17861 261 aa19.37■□□□□ 0.69
TRIM41-207ENST00000515223 PPP1R1BQ9UD71 204 aaPredicted RBP19.36■□□□□ 0.69
TRIM41-207ENST00000515223 INTS3Q68E01 1043 aaKnown RBP19.36■□□□□ 0.69
TRIM41-207ENST00000515223 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
TRIM41-207ENST00000515223 FAM177BA6PVY3 158 aa19.34■□□□□ 0.69
TRIM41-207ENST00000515223 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
TRIM41-207ENST00000515223 TMEM132EQ6IEE7 984 aa19.34■□□□□ 0.69
TRIM41-207ENST00000515223 C22orf23Q9BZE7 217 aa19.34■□□□□ 0.69
TRIM41-207ENST00000515223 SMC3Q9UQE7 1217 aa19.34■□□□□ 0.69
TRIM41-207ENST00000515223 SART3Q15020 963 aaKnown RBP19.34■□□□□ 0.69
TRIM41-207ENST00000515223 CCDC30Q5VVM6 783 aa19.33■□□□□ 0.68
TRIM41-207ENST00000515223 VPS37CA5D8V6 355 aaPredicted RBP19.32■□□□□ 0.68
TRIM41-207ENST00000515223 TNNT3P45378 269 aaPredicted RBP19.32■□□□□ 0.68
TRIM41-207ENST00000515223 ANKRD50Q9ULJ7 1429 aa19.32■□□□□ 0.68
TRIM41-207ENST00000515223 CT47A1Q5JQC4 288 aaPredicted RBP19.32■□□□□ 0.68
TRIM41-207ENST00000515223 CLASRPQ8N2M8 674 aaKnown RBP19.32■□□□□ 0.68
TRIM41-207ENST00000515223 SLC3A2P08195 630 aaKnown RBP19.32■□□□□ 0.68
TRIM41-207ENST00000515223 GNAI3P08754 354 aa19.31■□□□□ 0.68
TRIM41-207ENST00000515223 NUTM2BA6NNL0 878 aaPredicted RBP19.31■□□□□ 0.68
TRIM41-207ENST00000515223 NUTM2EB1AL46 878 aaPredicted RBP19.31■□□□□ 0.68
TRIM41-207ENST00000515223 NBPF1Q3BBV0 1214 aa19.31■□□□□ 0.68
TRIM41-207ENST00000515223 ODF2Q5BJF6 829 aa19.31■□□□□ 0.68
TRIM41-207ENST00000515223 NUTM2AQ8IVF1 878 aaPredicted RBP19.31■□□□□ 0.68
TRIM41-207ENST00000515223 BCAR3O75815 825 aa19.31■□□□□ 0.68
TRIM41-207ENST00000515223 HMGB2P26583 209 aaKnown RBP19.3■□□□□ 0.68
TRIM41-207ENST00000515223 GPS2Q13227 327 aa19.3■□□□□ 0.68
TRIM41-207ENST00000515223 CCDC73Q6ZRK6 1079 aa19.3■□□□□ 0.68
TRIM41-207ENST00000515223 AFAP1Q8N556 730 aa19.3■□□□□ 0.68
TRIM41-207ENST00000515223 LNPKQ9C0E8 428 aa19.3■□□□□ 0.68
TRIM41-207ENST00000515223 GNL3LQ9NVN8 582 aaKnown RBP19.3■□□□□ 0.68
TRIM41-207ENST00000515223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.3■□□□□ 0.68
TRIM41-207ENST00000515223 WWC2Q6AWC2 1192 aa19.29■□□□□ 0.68
TRIM41-207ENST00000515223 PPP2R1AP30153 589 aa19.29■□□□□ 0.68
TRIM41-207ENST00000515223 TOM1L2Q6ZVM7 507 aa19.29■□□□□ 0.68
TRIM41-207ENST00000515223 NINLQ9Y2I6 1382 aa19.29■□□□□ 0.68
TRIM41-207ENST00000515223 AAMPQ13685 434 aa19.28■□□□□ 0.68
TRIM41-207ENST00000515223 MTMR7Q9Y216 660 aa19.28■□□□□ 0.68
TRIM41-207ENST00000515223 FSD1Q9BTV5 496 aa19.28■□□□□ 0.68
TRIM41-207ENST00000515223 NAIPQ13075 1403 aa19.27■□□□□ 0.68
TRIM41-207ENST00000515223 PSMA5P28066 241 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms