RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 TMEM132EQ6IEE7 984 aa19.75■□□□□ 0.75
PFDN1-206ENST00000514611 KNDC1Q76NI1 1749 aa19.74■□□□□ 0.75
PFDN1-206ENST00000514611 ZNF772Q68DY9 489 aaPredicted RBP19.73■□□□□ 0.75
PFDN1-206ENST00000514611 WAPLQ7Z5K2 1190 aa19.73■□□□□ 0.75
PFDN1-206ENST00000514611 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
PFDN1-206ENST00000514611 MYOM2P54296 1465 aa19.73■□□□□ 0.75
PFDN1-206ENST00000514611 NRXN1Q9ULB1 1477 aa19.73■□□□□ 0.75
PFDN1-206ENST00000514611 YTHDC2Q9H6S0 1430 aaKnown RBP19.72■□□□□ 0.75
PFDN1-206ENST00000514611 SOS2Q07890 1332 aaPredicted RBP19.72■□□□□ 0.75
PFDN1-206ENST00000514611 ABCC11Q96J66 1382 aa19.71■□□□□ 0.75
PFDN1-206ENST00000514611 AFF2P51816 1311 aa19.71■□□□□ 0.75
PFDN1-206ENST00000514611 NUTM2FA1L443 756 aa19.69■□□□□ 0.74
PFDN1-206ENST00000514611 C8orf37Q96NL8 207 aa19.69■□□□□ 0.74
PFDN1-206ENST00000514611 ESCO1Q5FWF5 840 aa19.68■□□□□ 0.74
PFDN1-206ENST00000514611 CFAP70Q5T0N1 1121 aa19.67■□□□□ 0.74
PFDN1-206ENST00000514611 C14orf93Q9H972 538 aaKnown RBP19.67■□□□□ 0.74
PFDN1-206ENST00000514611 ADAMTS2O95450 1211 aa19.66■□□□□ 0.74
PFDN1-206ENST00000514611 PXDNQ92626 1479 aa19.66■□□□□ 0.74
PFDN1-206ENST00000514611 FMN2Q9NZ56 1722 aa19.65■□□□□ 0.74
PFDN1-206ENST00000514611 XPCQ01831 940 aaPredicted RBP19.64■□□□□ 0.73
PFDN1-206ENST00000514611 NPHP3Q7Z494 1330 aa19.64■□□□□ 0.73
PFDN1-206ENST00000514611 COL22A1Q8NFW1 1626 aaPredicted RBP19.63■□□□□ 0.73
PFDN1-206ENST00000514611 RXRBP28702 533 aa19.63■□□□□ 0.73
PFDN1-206ENST00000514611 DHX57Q6P158 1386 aaKnown RBP19.62■□□□□ 0.73
PFDN1-206ENST00000514611 FOXO3O43524 673 aa19.62■□□□□ 0.73
PFDN1-206ENST00000514611 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
PFDN1-206ENST00000514611 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
PFDN1-206ENST00000514611 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
PFDN1-206ENST00000514611 SIRT1Q96EB6 747 aa19.59■□□□□ 0.73
PFDN1-206ENST00000514611 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
PFDN1-206ENST00000514611 RGS12O14924 1447 aa19.59■□□□□ 0.73
PFDN1-206ENST00000514611 DLC1Q96QB1 1528 aa19.58■□□□□ 0.73
PFDN1-206ENST00000514611 NGLY1Q96IV0 654 aa19.58■□□□□ 0.72
PFDN1-206ENST00000514611 KIF1AQ12756 1690 aa19.58■□□□□ 0.72
PFDN1-206ENST00000514611 QTRT2Q9H974 415 aaKnown RBP19.57■□□□□ 0.72
PFDN1-206ENST00000514611 DCAF11Q8TEB1 546 aa19.55■□□□□ 0.72
PFDN1-206ENST00000514611 KDM2AQ9Y2K7 1162 aa19.55■□□□□ 0.72
PFDN1-206ENST00000514611 HRCP23327 699 aa19.54■□□□□ 0.72
PFDN1-206ENST00000514611 RBM6P78332 1123 aaKnown RBP19.54■□□□□ 0.72
PFDN1-206ENST00000514611 UPF1Q92900 1129 aaKnown RBP eCLIP19.54■□□□□ 0.727e-8■■■■■ 39
PFDN1-206ENST00000514611 USP21Q9UK80 565 aa19.54■□□□□ 0.72
PFDN1-206ENST00000514611 ADGRB2O60241 1585 aa19.53■□□□□ 0.72
PFDN1-206ENST00000514611 TRAK1Q9UPV9 953 aa19.53■□□□□ 0.72
PFDN1-206ENST00000514611 FNBP4Q8N3X1 1017 aaPredicted RBP19.52■□□□□ 0.72
PFDN1-206ENST00000514611 POGKQ9P215 609 aa19.52■□□□□ 0.72
PFDN1-206ENST00000514611 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
PFDN1-206ENST00000514611 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
PFDN1-206ENST00000514611 PHF8Q9UPP1 1060 aa19.51■□□□□ 0.71
PFDN1-206ENST00000514611 RGPD8O14715 1765 aaPredicted RBP19.51■□□□□ 0.71
PFDN1-206ENST00000514611 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
PFDN1-206ENST00000514611 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
PFDN1-206ENST00000514611 ATRNO75882 1429 aa19.5■□□□□ 0.71
PFDN1-206ENST00000514611 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
PFDN1-206ENST00000514611 TRPC5Q9UL62 973 aaPredicted RBP19.49■□□□□ 0.71
PFDN1-206ENST00000514611 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
PFDN1-206ENST00000514611 MARF1Q9Y4F3 1742 aaKnown RBP19.48■□□□□ 0.71
PFDN1-206ENST00000514611 ANKARQ7Z5J8 1434 aa19.48■□□□□ 0.71
PFDN1-206ENST00000514611 MINK1Q8N4C8 1332 aaPredicted RBP19.48■□□□□ 0.71
PFDN1-206ENST00000514611 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
PFDN1-206ENST00000514611 PRR36Q9H6K5 1346 aa19.45■□□□□ 0.7
PFDN1-206ENST00000514611 TULP4Q9NRJ4 1543 aa19.45■□□□□ 0.7
PFDN1-206ENST00000514611 PLEKHG5O94827 1062 aa19.44■□□□□ 0.7
PFDN1-206ENST00000514611 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
PFDN1-206ENST00000514611 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
PFDN1-206ENST00000514611 SLIT2O94813 1529 aa19.43■□□□□ 0.7
PFDN1-206ENST00000514611 STAC3Q96MF2 364 aa19.43■□□□□ 0.7
PFDN1-206ENST00000514611 PSME1Q06323 249 aa19.42■□□□□ 0.7
PFDN1-206ENST00000514611 CABLES1Q8TDN4 633 aa19.42■□□□□ 0.7
PFDN1-206ENST00000514611 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
PFDN1-206ENST00000514611 LMOD2Q6P5Q4 547 aa19.41■□□□□ 0.7
PFDN1-206ENST00000514611 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.41■□□□□ 0.7
PFDN1-206ENST00000514611 EIF3AQ14152 1382 aaKnown RBP19.41■□□□□ 0.7
PFDN1-206ENST00000514611 TRPM3Q9HCF6 1732 aaPredicted RBP19.4■□□□□ 0.7
PFDN1-206ENST00000514611 WASLO00401 505 aaPredicted RBP19.4■□□□□ 0.7
PFDN1-206ENST00000514611 ARHGEF10O15013 1369 aa19.4■□□□□ 0.7
PFDN1-206ENST00000514611 HAP1P54257 671 aaPredicted RBP19.39■□□□□ 0.69
PFDN1-206ENST00000514611 GLI3P10071 1580 aa19.38■□□□□ 0.69
PFDN1-206ENST00000514611 ATP7BP35670 1465 aa19.38■□□□□ 0.69
PFDN1-206ENST00000514611 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
PFDN1-206ENST00000514611 RALGAPBQ86X10 1494 aa19.38■□□□□ 0.69
PFDN1-206ENST00000514611 UNC5CLQ8IV45 518 aa19.38■□□□□ 0.69
PFDN1-206ENST00000514611 GJD4Q96KN9 370 aaPredicted RBP19.38■□□□□ 0.69
PFDN1-206ENST00000514611 EP400Q96L91 3159 aa19.38■□□□□ 0.69
PFDN1-206ENST00000514611 PLCH1Q4KWH8 1693 aa19.36■□□□□ 0.69
PFDN1-206ENST00000514611 GPRASP1Q5JY77 1395 aa19.35■□□□□ 0.69
PFDN1-206ENST00000514611 KIAA1210Q9ULL0 1709 aa19.35■□□□□ 0.69
PFDN1-206ENST00000514611 ALS2Q96Q42 1657 aa19.35■□□□□ 0.69
PFDN1-206ENST00000514611 NBPF1Q3BBV0 1214 aa19.33■□□□□ 0.68
PFDN1-206ENST00000514611 NGDNQ8NEJ9 315 aaKnown RBP19.32■□□□□ 0.68
PFDN1-206ENST00000514611 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
PFDN1-206ENST00000514611 NUDT16Q96DE0 195 aaKnown RBP19.31■□□□□ 0.68
PFDN1-206ENST00000514611 NWD2Q9ULI1 1742 aa19.31■□□□□ 0.68
PFDN1-206ENST00000514611 CDK19Q9BWU1 502 aa19.3■□□□□ 0.68
PFDN1-206ENST00000514611 TOPAZ1Q8N9V7 1692 aa19.3■□□□□ 0.68
PFDN1-206ENST00000514611 CRYBG1Q9Y4K1 1723 aa19.29■□□□□ 0.68
PFDN1-206ENST00000514611 FAM83GA6ND36 823 aa19.29■□□□□ 0.68
PFDN1-206ENST00000514611 PAK3O75914 559 aaPredicted RBP19.29■□□□□ 0.68
PFDN1-206ENST00000514611 VPS72Q15906 364 aa19.29■□□□□ 0.68
PFDN1-206ENST00000514611 NRAPQ86VF7 1730 aa19.28■□□□□ 0.68
PFDN1-206ENST00000514611 CCDC9Q9Y3X0 531 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms