RNA–Protein interactions for RNA: ENST00000513944.5

TNPO1-209, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-209ENST00000513944 ZSCAN1Q8NBB4 408 aa9.26□□□□□ -0.93
TNPO1-209ENST00000513944 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
TNPO1-209ENST00000513944 SLC16A10Q8TF71 515 aa9.25□□□□□ -0.93
TNPO1-209ENST00000513944 NXF1Q9UBU9 619 aaKnown RBP9.24□□□□□ -0.93
TNPO1-209ENST00000513944 RDH13Q8NBN7 331 aa9.23□□□□□ -0.93
TNPO1-209ENST00000513944 RNF19BQ6ZMZ0 732 aa9.22□□□□□ -0.93
TNPO1-209ENST00000513944 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.22□□□□□ -0.93
TNPO1-209ENST00000513944 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
TNPO1-209ENST00000513944 FECHP22830 423 aa9.2□□□□□ -0.94
TNPO1-209ENST00000513944 NPAS3Q8IXF0 933 aa9.2□□□□□ -0.94
TNPO1-209ENST00000513944 IRF7Q92985 503 aa9.2□□□□□ -0.94
TNPO1-209ENST00000513944 REPIN1Q9BWE0 567 aaKnown RBP9.2□□□□□ -0.94
TNPO1-209ENST00000513944 GCGRP47871 477 aa9.19□□□□□ -0.94
TNPO1-209ENST00000513944 MMP16P51512 607 aa9.19□□□□□ -0.94
TNPO1-209ENST00000513944 SUZ12Q15022 739 aaKnown RBP9.19□□□□□ -0.94
TNPO1-209ENST00000513944 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
TNPO1-209ENST00000513944 KCNV2Q8TDN2 545 aa9.19□□□□□ -0.94
TNPO1-209ENST00000513944 DDX11L8A8MPP1 907 aa9.18□□□□□ -0.94
TNPO1-209ENST00000513944 CFAP44Q96MT7 982 aa9.18□□□□□ -0.94
TNPO1-209ENST00000513944 ERBB4Q15303 1308 aa9.16□□□□□ -0.94
TNPO1-209ENST00000513944 H3BM21 787 aa9.16□□□□□ -0.94
TNPO1-209ENST00000513944 SKOR1P84550 965 aa9.16□□□□□ -0.94
TNPO1-209ENST00000513944 VEGFBP49765 207 aa9.15□□□□□ -0.94
TNPO1-209ENST00000513944 HIC1Q14526 733 aa9.15□□□□□ -0.94
TNPO1-209ENST00000513944 TRIM46Q7Z4K8 759 aa9.15□□□□□ -0.94
TNPO1-209ENST00000513944 RC3H1Q5TC82 1133 aaKnown RBP9.14□□□□□ -0.95
TNPO1-209ENST00000513944 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
TNPO1-209ENST00000513944 NLRP7Q8WX94 980 aa9.13□□□□□ -0.95
TNPO1-209ENST00000513944 BMP1P13497 986 aa9.12□□□□□ -0.95
TNPO1-209ENST00000513944 WNT7BP56706 349 aa9.12□□□□□ -0.95
TNPO1-209ENST00000513944 ALDH1A1P00352 501 aa9.1□□□□□ -0.95
TNPO1-209ENST00000513944 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
TNPO1-209ENST00000513944 Q3C1V9 767 aa9.09□□□□□ -0.95
TNPO1-209ENST00000513944 GRIPAP1Q4V328 841 aa9.08□□□□□ -0.96
TNPO1-209ENST00000513944 PHOX2BQ99453 314 aa9.08□□□□□ -0.96
TNPO1-209ENST00000513944 GNPATO15228 680 aa9.07□□□□□ -0.96
TNPO1-209ENST00000513944 CAPN5O15484 640 aaPredicted RBP9.07□□□□□ -0.96
TNPO1-209ENST00000513944 SIAH2O43255 324 aa9.07□□□□□ -0.96
TNPO1-209ENST00000513944 GSK3AP49840 483 aa9.07□□□□□ -0.96
TNPO1-209ENST00000513944 USB1Q9BQ65 265 aaKnown RBP9.07□□□□□ -0.96
TNPO1-209ENST00000513944 SEMA3EO15041 775 aa9.06□□□□□ -0.96
TNPO1-209ENST00000513944 GPR37O15354 613 aa9.06□□□□□ -0.96
TNPO1-209ENST00000513944 CCDC24Q8N4L8 307 aa9.05□□□□□ -0.96
TNPO1-209ENST00000513944 KCNMA1Q12791 1236 aa9.04□□□□□ -0.96
TNPO1-209ENST00000513944 ZFP42Q96MM3 310 aa9.03□□□□□ -0.96
TNPO1-209ENST00000513944 VSIG8P0DPA2 414 aa9.02□□□□□ -0.97
TNPO1-209ENST00000513944 KCTD17Q8N5Z5 321 aa9.02□□□□□ -0.97
TNPO1-209ENST00000513944 RBM26Q5T8P6 1007 aaKnown RBP9.01□□□□□ -0.97
TNPO1-209ENST00000513944 CD46P15529 392 aa8.99□□□□□ -0.97
TNPO1-209ENST00000513944 EHBP1Q8NDI1 1231 aa8.99□□□□□ -0.97
TNPO1-209ENST00000513944 HLA-CQ95604 372 aa8.99□□□□□ -0.97
TNPO1-209ENST00000513944 WASF2Q9Y6W5 498 aa8.99□□□□□ -0.97
TNPO1-209ENST00000513944 PTCRAQ6ISU1 281 aaPredicted RBP8.97□□□□□ -0.97
TNPO1-209ENST00000513944 KDM4AO75164 1064 aa8.96□□□□□ -0.98
TNPO1-209ENST00000513944 JUNDP17535 347 aa8.96□□□□□ -0.98
TNPO1-209ENST00000513944 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
TNPO1-209ENST00000513944 TESPA1A2RU30 521 aaPredicted RBP8.93□□□□□ -0.98
TNPO1-209ENST00000513944 SOBPA7XYQ1 873 aa8.93□□□□□ -0.98
TNPO1-209ENST00000513944 SH3BP2P78314 561 aa8.93□□□□□ -0.98
TNPO1-209ENST00000513944 MRPL14Q6P1L8 145 aaKnown RBP8.93□□□□□ -0.98
TNPO1-209ENST00000513944 P3H3Q8IVL6 736 aa8.92□□□□□ -0.98
TNPO1-209ENST00000513944 HOXA2O43364 376 aa8.91□□□□□ -0.98
TNPO1-209ENST00000513944 USP46P62068 366 aa8.91□□□□□ -0.98
TNPO1-209ENST00000513944 TMEM151AQ8N4L1 468 aa8.91□□□□□ -0.98
TNPO1-209ENST00000513944 NUDT12Q9BQG2 462 aa8.91□□□□□ -0.98
TNPO1-209ENST00000513944 TLL2Q9Y6L7 1015 aa8.91□□□□□ -0.98
TNPO1-209ENST00000513944 GUCA2AQ02747 115 aa8.9□□□□□ -0.98
TNPO1-209ENST00000513944 RASSF7Q02833 373 aa8.9□□□□□ -0.98
TNPO1-209ENST00000513944 PURBQ96QR8 312 aaKnown RBP8.9□□□□□ -0.98
TNPO1-209ENST00000513944 SYMPKQ92797 1274 aaKnown RBP8.89□□□□□ -0.99
TNPO1-209ENST00000513944 GDF11O95390 407 aa8.88□□□□□ -0.99
TNPO1-209ENST00000513944 TIMP2P16035 220 aa8.88□□□□□ -0.99
TNPO1-209ENST00000513944 NNTQ13423 1086 aa8.88□□□□□ -0.99
TNPO1-209ENST00000513944 SCARF1Q14162 830 aa8.88□□□□□ -0.99
TNPO1-209ENST00000513944 MPNDQ8N594 471 aa8.86□□□□□ -0.99
TNPO1-209ENST00000513944 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
TNPO1-209ENST00000513944 SMYD5Q6GMV2 418 aa8.85□□□□□ -0.99
TNPO1-209ENST00000513944 RETREG3Q86VR2 466 aa8.85□□□□□ -0.99
TNPO1-209ENST00000513944 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
TNPO1-209ENST00000513944 ADH1CP00326 375 aa8.84□□□□□ -0.99
TNPO1-209ENST00000513944 PLEKHG3A1L390 1219 aa8.83□□□□□ -1
TNPO1-209ENST00000513944 CCNYL3P0C7X3 344 aa8.83□□□□□ -1
TNPO1-209ENST00000513944 WDR4P57081 412 aaKnown RBP8.83□□□□□ -1
TNPO1-209ENST00000513944 KRT76Q01546 638 aa8.83□□□□□ -1
TNPO1-209ENST00000513944 LINC01559Q495D7 138 aa8.82□□□□□ -1
TNPO1-209ENST00000513944 UNC93B1Q9H1C4 597 aa8.82□□□□□ -1
TNPO1-209ENST00000513944 ADAMTS8Q9UP79 889 aa8.82□□□□□ -1
TNPO1-209ENST00000513944 RNF225M0QZC1 329 aaPredicted RBP8.81□□□□□ -1
TNPO1-209ENST00000513944 VARSP26640 1264 aaKnown RBP8.81□□□□□ -1
TNPO1-209ENST00000513944 BAP1Q92560 729 aa8.81□□□□□ -1
TNPO1-209ENST00000513944 MAN1A2O60476 641 aa8.8□□□□□ -1
TNPO1-209ENST00000513944 MS4A1P11836 297 aa8.8□□□□□ -1
TNPO1-209ENST00000513944 ZNF511Q8NB15 262 aa8.8□□□□□ -1
TNPO1-209ENST00000513944 EVA1BQ9NVM1 165 aa8.79□□□□□ -1
TNPO1-209ENST00000513944 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
TNPO1-209ENST00000513944 PTPRNQ16849 979 aa8.78□□□□□ -1
TNPO1-209ENST00000513944 GPR161Q8N6U8 529 aaKnown RBP8.78□□□□□ -1
TNPO1-209ENST00000513944 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
TNPO1-209ENST00000513944 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
TNPO1-209ENST00000513944 PCDHGC3Q9UN70 934 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms