RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
CLOCK-211ENST00000513440 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
CLOCK-211ENST00000513440 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
CLOCK-211ENST00000513440 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
CLOCK-211ENST00000513440 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
CLOCK-211ENST00000513440 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
CLOCK-211ENST00000513440 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
CLOCK-211ENST00000513440 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
CLOCK-211ENST00000513440 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
CLOCK-211ENST00000513440 CLUAP1Q96AJ1 413 aa18.25■□□□□ 0.51
CLOCK-211ENST00000513440 ADGRB3O60242 1522 aa18.25■□□□□ 0.51
CLOCK-211ENST00000513440 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
CLOCK-211ENST00000513440 TNNQ9UQP3 1299 aa18.24■□□□□ 0.51
CLOCK-211ENST00000513440 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
CLOCK-211ENST00000513440 MLECQ14165 292 aa18.23■□□□□ 0.51
CLOCK-211ENST00000513440 CFAP53Q96M91 514 aa18.23■□□□□ 0.51
CLOCK-211ENST00000513440 POGKQ9P215 609 aa18.23■□□□□ 0.51
CLOCK-211ENST00000513440 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
CLOCK-211ENST00000513440 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
CLOCK-211ENST00000513440 NRXN1Q9ULB1 1477 aa18.21■□□□□ 0.51
CLOCK-211ENST00000513440 ABCC3O15438 1527 aa18.21■□□□□ 0.51
CLOCK-211ENST00000513440 IGHDP01880 384 aa18.21■□□□□ 0.51
CLOCK-211ENST00000513440 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
CLOCK-211ENST00000513440 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
CLOCK-211ENST00000513440 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
CLOCK-211ENST00000513440 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
CLOCK-211ENST00000513440 RPGRIP1LQ68CZ1 1315 aa18.2■□□□□ 0.5
CLOCK-211ENST00000513440 LMTK2Q8IWU2 1503 aa18.19■□□□□ 0.5
CLOCK-211ENST00000513440 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
CLOCK-211ENST00000513440 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
CLOCK-211ENST00000513440 SBNO2Q9Y2G9 1366 aa18.19■□□□□ 0.5
CLOCK-211ENST00000513440 NEFMP07197 916 aa18.17■□□□□ 0.5
CLOCK-211ENST00000513440 DAXXQ9UER7 740 aaPredicted RBP18.17■□□□□ 0.5
CLOCK-211ENST00000513440 FBLN1P23142 703 aa18.17■□□□□ 0.5
CLOCK-211ENST00000513440 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
CLOCK-211ENST00000513440 ADGRB1O14514 1584 aa18.17■□□□□ 0.5
CLOCK-211ENST00000513440 IFT172Q9UG01 1749 aa18.17■□□□□ 0.5
CLOCK-211ENST00000513440 QRICH2Q9H0J4 1663 aa18.16■□□□□ 0.5
CLOCK-211ENST00000513440 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
CLOCK-211ENST00000513440 FAM69CQ0P6D2 419 aa18.14■□□□□ 0.49
CLOCK-211ENST00000513440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLOCK-211ENST00000513440 RLBP1P12271 317 aa18.14■□□□□ 0.49
CLOCK-211ENST00000513440 RARSP54136 660 aaKnown RBP18.14■□□□□ 0.49
CLOCK-211ENST00000513440 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
CLOCK-211ENST00000513440 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
CLOCK-211ENST00000513440 A0A1W2PP64 1363 aa18.12■□□□□ 0.49
CLOCK-211ENST00000513440 PPLO60437 1756 aa18.12■□□□□ 0.49
CLOCK-211ENST00000513440 ANKRD36BQ8N2N9 1353 aa18.12■□□□□ 0.49
CLOCK-211ENST00000513440 GLI2P10070 1586 aa18.11■□□□□ 0.49
CLOCK-211ENST00000513440 SETBP1Q9Y6X0 1596 aa18.11■□□□□ 0.49
CLOCK-211ENST00000513440 SIGLEC1Q9BZZ2 1709 aa18.11■□□□□ 0.49
CLOCK-211ENST00000513440 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
CLOCK-211ENST00000513440 TULP4Q9NRJ4 1543 aa18.11■□□□□ 0.49
CLOCK-211ENST00000513440 SLC52A1Q9NWF4 448 aa18.1■□□□□ 0.49
CLOCK-211ENST00000513440 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
CLOCK-211ENST00000513440 CAMSAP1Q5T5Y3 1602 aa18.1■□□□□ 0.49
CLOCK-211ENST00000513440 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
CLOCK-211ENST00000513440 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
CLOCK-211ENST00000513440 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
CLOCK-211ENST00000513440 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
CLOCK-211ENST00000513440 CDK19Q9BWU1 502 aa18.09■□□□□ 0.49
CLOCK-211ENST00000513440 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.49
CLOCK-211ENST00000513440 DIP2CQ9Y2E4 1556 aa18.08■□□□□ 0.48
CLOCK-211ENST00000513440 FYB1O15117 783 aa18.07■□□□□ 0.48
CLOCK-211ENST00000513440 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
CLOCK-211ENST00000513440 TERF2IPQ9NYB0 399 aa18.07■□□□□ 0.48
CLOCK-211ENST00000513440 PCDHB15Q9Y5E8 787 aa18.07■□□□□ 0.48
CLOCK-211ENST00000513440 NEXMIFQ5QGS0 1516 aa18.07■□□□□ 0.48
CLOCK-211ENST00000513440 FTSJ3Q8IY81 847 aaKnown RBP18.07■□□□□ 0.48
CLOCK-211ENST00000513440 EXOSC9Q06265 439 aaKnown RBP18.06■□□□□ 0.48
CLOCK-211ENST00000513440 WDR63Q8IWG1 891 aa18.06■□□□□ 0.48
CLOCK-211ENST00000513440 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
CLOCK-211ENST00000513440 NEO1Q92859 1461 aa18.06■□□□□ 0.48
CLOCK-211ENST00000513440 SMC4Q9NTJ3 1288 aa18.06■□□□□ 0.48
CLOCK-211ENST00000513440 HDGFL2Q7Z4V5 671 aaPredicted RBP18.05■□□□□ 0.48
CLOCK-211ENST00000513440 SEC24BO95487 1268 aa18.04■□□□□ 0.48
CLOCK-211ENST00000513440 TMPOP42166 694 aaKnown RBP18.03■□□□□ 0.48
CLOCK-211ENST00000513440 RIPK4P57078 832 aa18.03■□□□□ 0.48
CLOCK-211ENST00000513440 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
CLOCK-211ENST00000513440 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
CLOCK-211ENST00000513440 HMOX1P09601 288 aa18.02■□□□□ 0.48
CLOCK-211ENST00000513440 PIK3C2BO00750 1634 aa18.02■□□□□ 0.47
CLOCK-211ENST00000513440 ZC3H13Q5T200 1668 aaKnown RBP18.01■□□□□ 0.47
CLOCK-211ENST00000513440 DIAPH1O60610 1272 aaKnown RBP18.01■□□□□ 0.47
CLOCK-211ENST00000513440 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
CLOCK-211ENST00000513440 ITPRIPQ8IWB1 547 aa18.01■□□□□ 0.47
CLOCK-211ENST00000513440 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
CLOCK-211ENST00000513440 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
CLOCK-211ENST00000513440 NCKAP5LQ9HCH0 1330 aa18■□□□□ 0.47
CLOCK-211ENST00000513440 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
CLOCK-211ENST00000513440 ABCC11Q96J66 1382 aa17.99■□□□□ 0.47
CLOCK-211ENST00000513440 ZKSCAN2Q63HK3 967 aa17.99■□□□□ 0.47
CLOCK-211ENST00000513440 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
CLOCK-211ENST00000513440 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
CLOCK-211ENST00000513440 PDZRN3Q9UPQ7 1066 aa17.99■□□□□ 0.47
CLOCK-211ENST00000513440 ZRANB1Q9UGI0 708 aa17.99■□□□□ 0.47
CLOCK-211ENST00000513440 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
CLOCK-211ENST00000513440 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
CLOCK-211ENST00000513440 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
CLOCK-211ENST00000513440 NSD2O96028 1365 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms