RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
SNHG4-207ENST00000513259 SETBP1Q9Y6X0 1596 aa13.64□□□□□ -0.23
SNHG4-207ENST00000513259 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
SNHG4-207ENST00000513259 ZNF326Q5BKZ1 582 aaKnown RBP13.64□□□□□ -0.23
SNHG4-207ENST00000513259 RGS12O14924 1447 aa13.64□□□□□ -0.23
SNHG4-207ENST00000513259 PNPLA6Q8IY17 1366 aa13.63□□□□□ -0.23
SNHG4-207ENST00000513259 ITGAEP38570 1179 aa13.63□□□□□ -0.23
SNHG4-207ENST00000513259 SPHKAPQ2M3C7 1700 aa13.61□□□□□ -0.23
SNHG4-207ENST00000513259 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
SNHG4-207ENST00000513259 ADAMTS2O95450 1211 aa13.61□□□□□ -0.23
SNHG4-207ENST00000513259 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
SNHG4-207ENST00000513259 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
SNHG4-207ENST00000513259 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
SNHG4-207ENST00000513259 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
SNHG4-207ENST00000513259 C1orf167Q5SNV9 1468 aa13.57□□□□□ -0.24
SNHG4-207ENST00000513259 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
SNHG4-207ENST00000513259 CLTCL1P53675 1640 aa13.56□□□□□ -0.24
SNHG4-207ENST00000513259 LAMC1P11047 1609 aa13.55□□□□□ -0.24
SNHG4-207ENST00000513259 USP21Q9UK80 565 aa13.55□□□□□ -0.24
SNHG4-207ENST00000513259 SOS2Q07890 1332 aaPredicted RBP13.55□□□□□ -0.24
SNHG4-207ENST00000513259 PPARGC1BQ86YN6 1023 aaKnown RBP13.54□□□□□ -0.24
SNHG4-207ENST00000513259 KIF1BO60333 1816 aa13.54□□□□□ -0.24
SNHG4-207ENST00000513259 ATAD2Q6PL18 1390 aa13.54□□□□□ -0.24
SNHG4-207ENST00000513259 ROBO2Q9HCK4 1378 aa13.54□□□□□ -0.24
SNHG4-207ENST00000513259 EP400Q96L91 3159 aa13.53□□□□□ -0.24
SNHG4-207ENST00000513259 TRPC5Q9UL62 973 aaPredicted RBP13.53□□□□□ -0.24
SNHG4-207ENST00000513259 FNBP4Q8N3X1 1017 aaPredicted RBP13.52□□□□□ -0.25
SNHG4-207ENST00000513259 PTCH1Q13635 1447 aa13.51□□□□□ -0.25
SNHG4-207ENST00000513259 ATRNO75882 1429 aa13.5□□□□□ -0.25
SNHG4-207ENST00000513259 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
SNHG4-207ENST00000513259 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
SNHG4-207ENST00000513259 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
SNHG4-207ENST00000513259 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
SNHG4-207ENST00000513259 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
SNHG4-207ENST00000513259 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
SNHG4-207ENST00000513259 MARF1Q9Y4F3 1742 aaKnown RBP13.46□□□□□ -0.25
SNHG4-207ENST00000513259 MYOM2P54296 1465 aa13.46□□□□□ -0.25
SNHG4-207ENST00000513259 BCL9LQ86UU0 1499 aa13.46□□□□□ -0.25
SNHG4-207ENST00000513259 FOXO3O43524 673 aa13.45□□□□□ -0.26
SNHG4-207ENST00000513259 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
SNHG4-207ENST00000513259 PRAG1Q86YV5 1406 aa13.45□□□□□ -0.26
SNHG4-207ENST00000513259 RPGRIP1LQ68CZ1 1315 aa13.44□□□□□ -0.26
SNHG4-207ENST00000513259 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
SNHG4-207ENST00000513259 PXDNQ92626 1479 aa13.44□□□□□ -0.26
SNHG4-207ENST00000513259 NUTM2FA1L443 756 aa13.44□□□□□ -0.26
SNHG4-207ENST00000513259 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
SNHG4-207ENST00000513259 GJD4Q96KN9 370 aaPredicted RBP13.44□□□□□ -0.26
SNHG4-207ENST00000513259 PPLO60437 1756 aa13.44□□□□□ -0.26
SNHG4-207ENST00000513259 NAIPQ13075 1403 aa13.43□□□□□ -0.26
SNHG4-207ENST00000513259 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
SNHG4-207ENST00000513259 STK26Q9P289 416 aa13.42□□□□□ -0.26
SNHG4-207ENST00000513259 CDC42BPGQ6DT37 1551 aa13.41□□□□□ -0.26
SNHG4-207ENST00000513259 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
SNHG4-207ENST00000513259 BRWD3Q6RI45 1802 aa13.39□□□□□ -0.27
SNHG4-207ENST00000513259 UNC5CLQ8IV45 518 aa13.39□□□□□ -0.27
SNHG4-207ENST00000513259 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
SNHG4-207ENST00000513259 GLI3P10071 1580 aa13.38□□□□□ -0.27
SNHG4-207ENST00000513259 RALGAPBQ86X10 1494 aa13.38□□□□□ -0.27
SNHG4-207ENST00000513259 LRPPRCP42704 1394 aaKnown RBP13.38□□□□□ -0.27
SNHG4-207ENST00000513259 PLEKHH1Q9ULM0 1364 aa13.37□□□□□ -0.27
SNHG4-207ENST00000513259 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
SNHG4-207ENST00000513259 DEFB132Q7Z7B7 95 aa13.37□□□□□ -0.27
SNHG4-207ENST00000513259 SLIT2O94813 1529 aa13.37□□□□□ -0.27
SNHG4-207ENST00000513259 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
SNHG4-207ENST00000513259 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
SNHG4-207ENST00000513259 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
SNHG4-207ENST00000513259 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
SNHG4-207ENST00000513259 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
SNHG4-207ENST00000513259 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
SNHG4-207ENST00000513259 FMN2Q9NZ56 1722 aa13.35□□□□□ -0.27
SNHG4-207ENST00000513259 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
SNHG4-207ENST00000513259 TECPR2O15040 1411 aa13.34□□□□□ -0.27
SNHG4-207ENST00000513259 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
SNHG4-207ENST00000513259 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
SNHG4-207ENST00000513259 ABCC11Q96J66 1382 aa13.33□□□□□ -0.27
SNHG4-207ENST00000513259 USP32Q8NFA0 1604 aa13.33□□□□□ -0.28
SNHG4-207ENST00000513259 KNDC1Q76NI1 1749 aa13.33□□□□□ -0.28
SNHG4-207ENST00000513259 IFT172Q9UG01 1749 aa13.33□□□□□ -0.28
SNHG4-207ENST00000513259 KIF1AQ12756 1690 aa13.32□□□□□ -0.28
SNHG4-207ENST00000513259 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
SNHG4-207ENST00000513259 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
SNHG4-207ENST00000513259 SF3B2Q13435 895 aaKnown RBP13.31□□□□□ -0.28
SNHG4-207ENST00000513259 VPS72Q15906 364 aa13.31□□□□□ -0.28
SNHG4-207ENST00000513259 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
SNHG4-207ENST00000513259 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
SNHG4-207ENST00000513259 ONECUT3O60422 494 aaPredicted RBP13.3□□□□□ -0.28
SNHG4-207ENST00000513259 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
SNHG4-207ENST00000513259 PLCH1Q4KWH8 1693 aa13.3□□□□□ -0.28
SNHG4-207ENST00000513259 ANKRD30BQ9BXX2 1392 aa13.3□□□□□ -0.28
SNHG4-207ENST00000513259 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
SNHG4-207ENST00000513259 PSME1Q06323 249 aa13.29□□□□□ -0.28
SNHG4-207ENST00000513259 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
SNHG4-207ENST00000513259 KRT27Q7Z3Y8 459 aa13.29□□□□□ -0.28
SNHG4-207ENST00000513259 TNS3Q68CZ2 1445 aa13.29□□□□□ -0.28
SNHG4-207ENST00000513259 NWD2Q9ULI1 1742 aa13.28□□□□□ -0.28
SNHG4-207ENST00000513259 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
SNHG4-207ENST00000513259 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
SNHG4-207ENST00000513259 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
SNHG4-207ENST00000513259 ABCA3Q99758 1704 aa13.27□□□□□ -0.28
SNHG4-207ENST00000513259 PSDA5PKW4 1024 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms