RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 RGPD8O14715 1765 aaPredicted RBP17.8■□□□□ 0.44
CDK7-208ENST00000512687 C1orf167Q5SNV9 1468 aa17.8■□□□□ 0.44
CDK7-208ENST00000512687 FMN2Q9NZ56 1722 aa17.79■□□□□ 0.44
CDK7-208ENST00000512687 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
CDK7-208ENST00000512687 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
CDK7-208ENST00000512687 TMEM132EQ6IEE7 984 aa17.76■□□□□ 0.43
CDK7-208ENST00000512687 DDX17Q92841 729 aaKnown RBP17.75■□□□□ 0.43
CDK7-208ENST00000512687 PLEKHH1Q9ULM0 1364 aa17.75■□□□□ 0.43
CDK7-208ENST00000512687 HRCP23327 699 aa17.74■□□□□ 0.43
CDK7-208ENST00000512687 STK26Q9P289 416 aa17.74■□□□□ 0.43
CDK7-208ENST00000512687 ABCC11Q96J66 1382 aa17.73■□□□□ 0.43
CDK7-208ENST00000512687 ADGRB1O14514 1584 aa17.73■□□□□ 0.43
CDK7-208ENST00000512687 WAPLQ7Z5K2 1190 aa17.72■□□□□ 0.43
CDK7-208ENST00000512687 CFAP70Q5T0N1 1121 aa17.71■□□□□ 0.43
CDK7-208ENST00000512687 C14orf93Q9H972 538 aaKnown RBP17.71■□□□□ 0.43
CDK7-208ENST00000512687 SPATA31A6Q5VVP1 1343 aa17.71■□□□□ 0.42
CDK7-208ENST00000512687 POTEAQ6S8J7 498 aa17.7■□□□□ 0.42
CDK7-208ENST00000512687 ORAI2Q96SN7 254 aa17.7■□□□□ 0.42
CDK7-208ENST00000512687 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
CDK7-208ENST00000512687 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
CDK7-208ENST00000512687 KIF1AQ12756 1690 aa17.69■□□□□ 0.42
CDK7-208ENST00000512687 PNPLA6Q8IY17 1366 aa17.68■□□□□ 0.42
CDK7-208ENST00000512687 DLC1Q96QB1 1528 aa17.68■□□□□ 0.42
CDK7-208ENST00000512687 HOXD11P31277 338 aaPredicted RBP17.68■□□□□ 0.42
CDK7-208ENST00000512687 MARF1Q9Y4F3 1742 aaKnown RBP17.68■□□□□ 0.42
CDK7-208ENST00000512687 USP32Q8NFA0 1604 aa17.68■□□□□ 0.42
CDK7-208ENST00000512687 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
CDK7-208ENST00000512687 ADGRB2O60241 1585 aa17.67■□□□□ 0.42
CDK7-208ENST00000512687 PXDNQ92626 1479 aa17.66■□□□□ 0.42
CDK7-208ENST00000512687 KIAA1210Q9ULL0 1709 aa17.65■□□□□ 0.42
CDK7-208ENST00000512687 SOS2Q07890 1332 aaPredicted RBP17.64■□□□□ 0.41
CDK7-208ENST00000512687 NUTM2FA1L443 756 aa17.63■□□□□ 0.41
CDK7-208ENST00000512687 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
CDK7-208ENST00000512687 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
CDK7-208ENST00000512687 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
CDK7-208ENST00000512687 DCAF11Q8TEB1 546 aa17.63■□□□□ 0.41
CDK7-208ENST00000512687 LRRC59Q96AG4 307 aaKnown RBP17.63■□□□□ 0.41
CDK7-208ENST00000512687 KDM2AQ9Y2K7 1162 aa17.63■□□□□ 0.41
CDK7-208ENST00000512687 MEX3CQ5U5Q3 659 aaKnown RBP17.62■□□□□ 0.41
CDK7-208ENST00000512687 SIRT1Q96EB6 747 aa17.62■□□□□ 0.41
CDK7-208ENST00000512687 ESCO1Q5FWF5 840 aa17.61■□□□□ 0.41
CDK7-208ENST00000512687 ABCA3Q99758 1704 aa17.6■□□□□ 0.41
CDK7-208ENST00000512687 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDK7-208ENST00000512687 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
CDK7-208ENST00000512687 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
CDK7-208ENST00000512687 XPCQ01831 940 aaPredicted RBP17.57■□□□□ 0.4
CDK7-208ENST00000512687 TRPM3Q9HCF6 1732 aaPredicted RBP17.57■□□□□ 0.4
CDK7-208ENST00000512687 ITSN1Q15811 1721 aa17.56■□□□□ 0.4
CDK7-208ENST00000512687 FOXO3O43524 673 aa17.56■□□□□ 0.4
CDK7-208ENST00000512687 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
CDK7-208ENST00000512687 AFF2P51816 1311 aa17.55■□□□□ 0.4
CDK7-208ENST00000512687 STAC3Q96MF2 364 aa17.54■□□□□ 0.4
CDK7-208ENST00000512687 TULP4Q9NRJ4 1543 aa17.53■□□□□ 0.4
CDK7-208ENST00000512687 TOPAZ1Q8N9V7 1692 aa17.53■□□□□ 0.4
CDK7-208ENST00000512687 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
CDK7-208ENST00000512687 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
CDK7-208ENST00000512687 POGKQ9P215 609 aa17.53■□□□□ 0.4
CDK7-208ENST00000512687 ANKARQ7Z5J8 1434 aa17.53■□□□□ 0.4
CDK7-208ENST00000512687 ALS2Q96Q42 1657 aa17.52■□□□□ 0.4
CDK7-208ENST00000512687 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
CDK7-208ENST00000512687 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.39
CDK7-208ENST00000512687 MINK1Q8N4C8 1332 aaPredicted RBP17.51■□□□□ 0.39
CDK7-208ENST00000512687 ADAMTS2O95450 1211 aa17.51■□□□□ 0.39
CDK7-208ENST00000512687 HIRIP3Q9BW71 556 aaPredicted RBP17.51■□□□□ 0.39
CDK7-208ENST00000512687 QRICH2Q9H0J4 1663 aa17.51■□□□□ 0.39
CDK7-208ENST00000512687 CRYBG1Q9Y4K1 1723 aa17.5■□□□□ 0.39
CDK7-208ENST00000512687 PLCH1Q4KWH8 1693 aa17.49■□□□□ 0.39
CDK7-208ENST00000512687 PHF8Q9UPP1 1060 aa17.49■□□□□ 0.39
CDK7-208ENST00000512687 PRR36Q9H6K5 1346 aa17.48■□□□□ 0.39
CDK7-208ENST00000512687 TNS3Q68CZ2 1445 aa17.48■□□□□ 0.39
CDK7-208ENST00000512687 CDK12Q9NYV4 1490 aaPredicted RBP17.48■□□□□ 0.39
CDK7-208ENST00000512687 SPATA31A3Q5VYP0 1347 aa17.47■□□□□ 0.39
CDK7-208ENST00000512687 ATP7BP35670 1465 aa17.47■□□□□ 0.39
CDK7-208ENST00000512687 RGS12O14924 1447 aa17.47■□□□□ 0.39
CDK7-208ENST00000512687 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.39
CDK7-208ENST00000512687 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
CDK7-208ENST00000512687 SIN3AQ96ST3 1273 aa17.46■□□□□ 0.39
CDK7-208ENST00000512687 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
CDK7-208ENST00000512687 WASLO00401 505 aaPredicted RBP17.44■□□□□ 0.38
CDK7-208ENST00000512687 RXRBP28702 533 aa17.44■□□□□ 0.38
CDK7-208ENST00000512687 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
CDK7-208ENST00000512687 NWD2Q9ULI1 1742 aa17.44■□□□□ 0.38
CDK7-208ENST00000512687 SBNO1A3KN83 1393 aa17.43■□□□□ 0.38
CDK7-208ENST00000512687 EIF3AQ14152 1382 aaKnown RBP17.43■□□□□ 0.38
CDK7-208ENST00000512687 L3MBTL2Q969R5 705 aa17.43■□□□□ 0.38
CDK7-208ENST00000512687 ATRNO75882 1429 aa17.43■□□□□ 0.38
CDK7-208ENST00000512687 BCL9LQ86UU0 1499 aa17.43■□□□□ 0.38
CDK7-208ENST00000512687 QTRT2Q9H974 415 aaKnown RBP17.42■□□□□ 0.38
CDK7-208ENST00000512687 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
CDK7-208ENST00000512687 PHRF1Q9P1Y6 1649 aaKnown RBP17.41■□□□□ 0.38
CDK7-208ENST00000512687 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
CDK7-208ENST00000512687 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
CDK7-208ENST00000512687 USP21Q9UK80 565 aa17.4■□□□□ 0.38
CDK7-208ENST00000512687 SLIT2O94813 1529 aa17.4■□□□□ 0.38
CDK7-208ENST00000512687 GLI3P10071 1580 aa17.4■□□□□ 0.38
CDK7-208ENST00000512687 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
CDK7-208ENST00000512687 PSME1Q06323 249 aa17.39■□□□□ 0.37
CDK7-208ENST00000512687 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
CDK7-208ENST00000512687 CABLES1Q8TDN4 633 aa17.38■□□□□ 0.37
CDK7-208ENST00000512687 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms