RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NHSL1Q5SYE7 1610 aa18.71■□□□□ 0.58
VEGFA-216ENST00000512683 ADAMTS2O95450 1211 aa18.7■□□□□ 0.58
VEGFA-216ENST00000512683 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
VEGFA-216ENST00000512683 TRPC5Q9UL62 973 aaPredicted RBP18.7■□□□□ 0.58
VEGFA-216ENST00000512683 KIF1BO60333 1816 aa18.7■□□□□ 0.58
VEGFA-216ENST00000512683 FOXD1Q16676 465 aa18.69■□□□□ 0.58
VEGFA-216ENST00000512683 SPATA31E1Q6ZUB1 1445 aa18.68■□□□□ 0.58
VEGFA-216ENST00000512683 USP21Q9UK80 565 aa18.68■□□□□ 0.58
VEGFA-216ENST00000512683 TECPR2O15040 1411 aa18.67■□□□□ 0.58
VEGFA-216ENST00000512683 LAMC1P11047 1609 aa18.67■□□□□ 0.58
VEGFA-216ENST00000512683 FOXO3O43524 673 aa18.65■□□□□ 0.58
VEGFA-216ENST00000512683 WAPLQ7Z5K2 1190 aa18.65■□□□□ 0.58
VEGFA-216ENST00000512683 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
VEGFA-216ENST00000512683 STK26Q9P289 416 aa18.65■□□□□ 0.58
VEGFA-216ENST00000512683 NALCNQ8IZF0 1738 aa18.63■□□□□ 0.57
VEGFA-216ENST00000512683 TMEM132EQ6IEE7 984 aa18.62■□□□□ 0.57
VEGFA-216ENST00000512683 CDC42BPGQ6DT37 1551 aa18.6■□□□□ 0.57
VEGFA-216ENST00000512683 PIK3C2GO75747 1445 aa18.6■□□□□ 0.57
VEGFA-216ENST00000512683 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
VEGFA-216ENST00000512683 CCDC125Q86Z20 511 aa18.6■□□□□ 0.57
VEGFA-216ENST00000512683 STAC3Q96MF2 364 aa18.6■□□□□ 0.57
VEGFA-216ENST00000512683 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
VEGFA-216ENST00000512683 RGS12O14924 1447 aa18.59■□□□□ 0.57
VEGFA-216ENST00000512683 ATAD2Q6PL18 1390 aa18.59■□□□□ 0.57
VEGFA-216ENST00000512683 PSME1Q06323 249 aa18.59■□□□□ 0.57
VEGFA-216ENST00000512683 MYOM2P54296 1465 aa18.58■□□□□ 0.57
VEGFA-216ENST00000512683 YTHDC2Q9H6S0 1430 aaKnown RBP18.58■□□□□ 0.57
VEGFA-216ENST00000512683 SPATA31A3Q5VYP0 1347 aa18.57■□□□□ 0.56
VEGFA-216ENST00000512683 PPLO60437 1756 aa18.57■□□□□ 0.56
VEGFA-216ENST00000512683 PXDNQ92626 1479 aa18.57■□□□□ 0.56
VEGFA-216ENST00000512683 ATRNO75882 1429 aa18.57■□□□□ 0.56
VEGFA-216ENST00000512683 KRT28Q7Z3Y7 464 aa18.56■□□□□ 0.56
VEGFA-216ENST00000512683 GJD4Q96KN9 370 aaPredicted RBP18.56■□□□□ 0.56
VEGFA-216ENST00000512683 NUTM2FA1L443 756 aa18.54■□□□□ 0.56
VEGFA-216ENST00000512683 CFAP70Q5T0N1 1121 aa18.54■□□□□ 0.56
VEGFA-216ENST00000512683 UNC5CLQ8IV45 518 aa18.54■□□□□ 0.56
VEGFA-216ENST00000512683 PHF8Q9UPP1 1060 aa18.54■□□□□ 0.56
VEGFA-216ENST00000512683 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
VEGFA-216ENST00000512683 BCL9LQ86UU0 1499 aa18.53■□□□□ 0.56
VEGFA-216ENST00000512683 HRCP23327 699 aa18.53■□□□□ 0.56
VEGFA-216ENST00000512683 XPCQ01831 940 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-216ENST00000512683 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-216ENST00000512683 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.55
VEGFA-216ENST00000512683 POGKQ9P215 609 aa18.51■□□□□ 0.55
VEGFA-216ENST00000512683 PRAM1Q96QH2 718 aa18.5■□□□□ 0.55
VEGFA-216ENST00000512683 SBNO1A3KN83 1393 aa18.5■□□□□ 0.55
VEGFA-216ENST00000512683 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
VEGFA-216ENST00000512683 ARHGEF10O15013 1369 aa18.47■□□□□ 0.55
VEGFA-216ENST00000512683 ONECUT3O60422 494 aaPredicted RBP18.46■□□□□ 0.55
VEGFA-216ENST00000512683 HAP1P54257 671 aaPredicted RBP18.46■□□□□ 0.55
VEGFA-216ENST00000512683 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
VEGFA-216ENST00000512683 ANKARQ7Z5J8 1434 aa18.46■□□□□ 0.55
VEGFA-216ENST00000512683 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
VEGFA-216ENST00000512683 SLIT2O94813 1529 aa18.45■□□□□ 0.54
VEGFA-216ENST00000512683 VPS72Q15906 364 aa18.45■□□□□ 0.54
VEGFA-216ENST00000512683 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
VEGFA-216ENST00000512683 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
VEGFA-216ENST00000512683 DLC1Q96QB1 1528 aa18.43■□□□□ 0.54
VEGFA-216ENST00000512683 KNDC1Q76NI1 1749 aa18.43■□□□□ 0.54
VEGFA-216ENST00000512683 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
VEGFA-216ENST00000512683 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
VEGFA-216ENST00000512683 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
VEGFA-216ENST00000512683 KIF1AQ12756 1690 aa18.41■□□□□ 0.54
VEGFA-216ENST00000512683 WASLO00401 505 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-216ENST00000512683 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
VEGFA-216ENST00000512683 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
VEGFA-216ENST00000512683 SEPT12Q8IYM1 358 aa18.39■□□□□ 0.53
VEGFA-216ENST00000512683 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.53
VEGFA-216ENST00000512683 FMN2Q9NZ56 1722 aa18.38■□□□□ 0.53
VEGFA-216ENST00000512683 FAM83GA6ND36 823 aa18.38■□□□□ 0.53
VEGFA-216ENST00000512683 PMFBP1Q8TBY8 1022 aa18.38■□□□□ 0.53
VEGFA-216ENST00000512683 CABLES1Q8TDN4 633 aa18.38■□□□□ 0.53
VEGFA-216ENST00000512683 KDM2AQ9Y2K7 1162 aa18.38■□□□□ 0.53
VEGFA-216ENST00000512683 SF3B2Q13435 895 aaKnown RBP18.37■□□□□ 0.53
VEGFA-216ENST00000512683 BLMP54132 1417 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-216ENST00000512683 NGDNQ8NEJ9 315 aaKnown RBP18.35■□□□□ 0.53
VEGFA-216ENST00000512683 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
VEGFA-216ENST00000512683 KRT27Q7Z3Y8 459 aa18.34■□□□□ 0.53
VEGFA-216ENST00000512683 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
VEGFA-216ENST00000512683 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
VEGFA-216ENST00000512683 ADGRB1O14514 1584 aa18.33■□□□□ 0.52
VEGFA-216ENST00000512683 PRR36Q9H6K5 1346 aa18.31■□□□□ 0.52
VEGFA-216ENST00000512683 BTG4Q9NY30 223 aa18.31■□□□□ 0.52
VEGFA-216ENST00000512683 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.31■□□□□ 0.52
VEGFA-216ENST00000512683 USP32Q8NFA0 1604 aa18.31■□□□□ 0.52
VEGFA-216ENST00000512683 ADGRB2O60241 1585 aa18.3■□□□□ 0.52
VEGFA-216ENST00000512683 NUDT16Q96DE0 195 aaKnown RBP18.3■□□□□ 0.52
VEGFA-216ENST00000512683 GLI3P10071 1580 aa18.29■□□□□ 0.52
VEGFA-216ENST00000512683 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
VEGFA-216ENST00000512683 MARF1Q9Y4F3 1742 aaKnown RBP18.28■□□□□ 0.52
VEGFA-216ENST00000512683 TULP4Q9NRJ4 1543 aa18.28■□□□□ 0.52
VEGFA-216ENST00000512683 PAK3O75914 559 aaPredicted RBP18.27■□□□□ 0.52
VEGFA-216ENST00000512683 PLEKHG3A1L390 1219 aa18.26■□□□□ 0.51
VEGFA-216ENST00000512683 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
VEGFA-216ENST00000512683 SPATA31A5Q5VU36 1347 aa18.25■□□□□ 0.51
VEGFA-216ENST00000512683 SPATA31A7Q8IWB4 1347 aa18.25■□□□□ 0.51
VEGFA-216ENST00000512683 BAG6P46379 1132 aa18.25■□□□□ 0.51
VEGFA-216ENST00000512683 FAM98CQ17RN3 349 aaKnown RBP18.25■□□□□ 0.51
VEGFA-216ENST00000512683 CDK19Q9BWU1 502 aa18.25■□□□□ 0.51
VEGFA-216ENST00000512683 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms