RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
CCHCR1-229ENST00000512418 AFF2P51816 1311 aa21.81■■□□□ 1.08
CCHCR1-229ENST00000512418 ABCC11Q96J66 1382 aa21.81■■□□□ 1.08
CCHCR1-229ENST00000512418 STK26Q9P289 416 aa21.8■■□□□ 1.08
CCHCR1-229ENST00000512418 RAB3GAP2Q9H2M9 1393 aa21.79■■□□□ 1.08
CCHCR1-229ENST00000512418 RXRBP28702 533 aa21.78■■□□□ 1.08
CCHCR1-229ENST00000512418 C8orf37Q96NL8 207 aa21.78■■□□□ 1.08
CCHCR1-229ENST00000512418 MYOM2P54296 1465 aa21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 WAPLQ7Z5K2 1190 aa21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 NPHP3Q7Z494 1330 aa21.77■■□□□ 1.07
CCHCR1-229ENST00000512418 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.07
CCHCR1-229ENST00000512418 ESCO1Q5FWF5 840 aa21.76■■□□□ 1.07
CCHCR1-229ENST00000512418 PLEKHH1Q9ULM0 1364 aa21.74■■□□□ 1.07
CCHCR1-229ENST00000512418 COL22A1Q8NFW1 1626 aaPredicted RBP21.74■■□□□ 1.07
CCHCR1-229ENST00000512418 PXDNQ92626 1479 aa21.73■■□□□ 1.07
CCHCR1-229ENST00000512418 ADAMTS2O95450 1211 aa21.73■■□□□ 1.07
CCHCR1-229ENST00000512418 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
CCHCR1-229ENST00000512418 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
CCHCR1-229ENST00000512418 SIRT1Q96EB6 747 aa21.71■■□□□ 1.07
CCHCR1-229ENST00000512418 NGLY1Q96IV0 654 aa21.7■■□□□ 1.06
CCHCR1-229ENST00000512418 DHX57Q6P158 1386 aaKnown RBP21.7■■□□□ 1.06
CCHCR1-229ENST00000512418 NUTM2FA1L443 756 aa21.69■■□□□ 1.06
CCHCR1-229ENST00000512418 FOXO3O43524 673 aa21.69■■□□□ 1.06
CCHCR1-229ENST00000512418 CFAP70Q5T0N1 1121 aa21.69■■□□□ 1.06
CCHCR1-229ENST00000512418 QTRT2Q9H974 415 aaKnown RBP21.69■■□□□ 1.06
CCHCR1-229ENST00000512418 RBM6P78332 1123 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-229ENST00000512418 KIF1AQ12756 1690 aa21.68■■□□□ 1.06
CCHCR1-229ENST00000512418 UPF1Q92900 1129 aaKnown RBP eCLIP21.67■■□□□ 1.06
CCHCR1-229ENST00000512418 RGS12O14924 1447 aa21.66■■□□□ 1.06
CCHCR1-229ENST00000512418 XPCQ01831 940 aaPredicted RBP21.65■■□□□ 1.06
CCHCR1-229ENST00000512418 FNBP4Q8N3X1 1017 aaPredicted RBP21.64■■□□□ 1.05
CCHCR1-229ENST00000512418 DLC1Q96QB1 1528 aa21.64■■□□□ 1.05
CCHCR1-229ENST00000512418 USP21Q9UK80 565 aa21.63■■□□□ 1.05
CCHCR1-229ENST00000512418 HRCP23327 699 aa21.62■■□□□ 1.05
CCHCR1-229ENST00000512418 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
CCHCR1-229ENST00000512418 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
CCHCR1-229ENST00000512418 MARF1Q9Y4F3 1742 aaKnown RBP21.61■■□□□ 1.05
CCHCR1-229ENST00000512418 TRPC5Q9UL62 973 aaPredicted RBP21.61■■□□□ 1.05
CCHCR1-229ENST00000512418 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
CCHCR1-229ENST00000512418 RGPD8O14715 1765 aaPredicted RBP21.59■■□□□ 1.05
CCHCR1-229ENST00000512418 ADGRB2O60241 1585 aa21.58■■□□□ 1.05
CCHCR1-229ENST00000512418 ATRNO75882 1429 aa21.58■■□□□ 1.05
CCHCR1-229ENST00000512418 SAFB2Q14151 953 aaKnown RBP eCLIP21.58■■□□□ 1.05
CCHCR1-229ENST00000512418 STAC3Q96MF2 364 aa21.57■■□□□ 1.04
CCHCR1-229ENST00000512418 POGKQ9P215 609 aa21.57■■□□□ 1.04
CCHCR1-229ENST00000512418 PHF8Q9UPP1 1060 aa21.57■■□□□ 1.04
CCHCR1-229ENST00000512418 KRT28Q7Z3Y7 464 aa21.56■■□□□ 1.04
CCHCR1-229ENST00000512418 DCAF11Q8TEB1 546 aa21.56■■□□□ 1.04
CCHCR1-229ENST00000512418 BCL9LQ86UU0 1499 aa21.56■■□□□ 1.04
CCHCR1-229ENST00000512418 ANKARQ7Z5J8 1434 aa21.55■■□□□ 1.04
CCHCR1-229ENST00000512418 KDM2AQ9Y2K7 1162 aa21.55■■□□□ 1.04
CCHCR1-229ENST00000512418 TNS3Q68CZ2 1445 aa21.55■■□□□ 1.04
CCHCR1-229ENST00000512418 PSME1Q06323 249 aa21.54■■□□□ 1.04
CCHCR1-229ENST00000512418 TRAK1Q9UPV9 953 aa21.53■■□□□ 1.04
CCHCR1-229ENST00000512418 USP32Q8NFA0 1604 aa21.53■■□□□ 1.04
CCHCR1-229ENST00000512418 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.52■■□□□ 1.04
CCHCR1-229ENST00000512418 SBNO1A3KN83 1393 aa21.51■■□□□ 1.03
CCHCR1-229ENST00000512418 ATAD2Q6PL18 1390 aa21.51■■□□□ 1.03
CCHCR1-229ENST00000512418 EIF3AQ14152 1382 aaKnown RBP21.5■■□□□ 1.03
CCHCR1-229ENST00000512418 SLIT2O94813 1529 aa21.5■■□□□ 1.03
CCHCR1-229ENST00000512418 ARHGEF10O15013 1369 aa21.49■■□□□ 1.03
CCHCR1-229ENST00000512418 HIRIP3Q9BW71 556 aaPredicted RBP21.48■■□□□ 1.03
CCHCR1-229ENST00000512418 TULP4Q9NRJ4 1543 aa21.48■■□□□ 1.03
CCHCR1-229ENST00000512418 HAP1P54257 671 aaPredicted RBP21.47■■□□□ 1.03
CCHCR1-229ENST00000512418 PMFBP1Q8TBY8 1022 aa21.47■■□□□ 1.03
CCHCR1-229ENST00000512418 GJD4Q96KN9 370 aaPredicted RBP21.47■■□□□ 1.03
CCHCR1-229ENST00000512418 MINK1Q8N4C8 1332 aaPredicted RBP21.47■■□□□ 1.03
CCHCR1-229ENST00000512418 ABCA3Q99758 1704 aa21.46■■□□□ 1.03
CCHCR1-229ENST00000512418 UNC5CLQ8IV45 518 aa21.46■■□□□ 1.03
CCHCR1-229ENST00000512418 ARHGEF28Q8N1W1 1705 aaKnown RBP21.46■■□□□ 1.03
CCHCR1-229ENST00000512418 WASLO00401 505 aaPredicted RBP21.44■■□□□ 1.02
CCHCR1-229ENST00000512418 LMOD2Q6P5Q4 547 aa21.44■■□□□ 1.02
CCHCR1-229ENST00000512418 EP400Q96L91 3159 aa21.44■■□□□ 1.02
CCHCR1-229ENST00000512418 TRPM3Q9HCF6 1732 aaPredicted RBP21.43■■□□□ 1.02
CCHCR1-229ENST00000512418 CABLES1Q8TDN4 633 aa21.43■■□□□ 1.02
CCHCR1-229ENST00000512418 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
CCHCR1-229ENST00000512418 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
CCHCR1-229ENST00000512418 GLI3P10071 1580 aa21.42■■□□□ 1.02
CCHCR1-229ENST00000512418 GPRASP1Q5JY77 1395 aa21.42■■□□□ 1.02
CCHCR1-229ENST00000512418 NWD2Q9ULI1 1742 aa21.42■■□□□ 1.02
CCHCR1-229ENST00000512418 PLCH1Q4KWH8 1693 aa21.41■■□□□ 1.02
CCHCR1-229ENST00000512418 KIAA1210Q9ULL0 1709 aa21.41■■□□□ 1.02
CCHCR1-229ENST00000512418 ALS2Q96Q42 1657 aa21.4■■□□□ 1.02
CCHCR1-229ENST00000512418 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
CCHCR1-229ENST00000512418 ITSN1Q15811 1721 aa21.39■■□□□ 1.01
CCHCR1-229ENST00000512418 ATP7BP35670 1465 aa21.38■■□□□ 1.01
CCHCR1-229ENST00000512418 VPS72Q15906 364 aa21.37■■□□□ 1.01
CCHCR1-229ENST00000512418 NGDNQ8NEJ9 315 aaKnown RBP21.36■■□□□ 1.01
CCHCR1-229ENST00000512418 CCDC125Q86Z20 511 aa21.35■■□□□ 1.01
CCHCR1-229ENST00000512418 FAM83GA6ND36 823 aa21.33■■□□□ 1.01
CCHCR1-229ENST00000512418 NUDT16Q96DE0 195 aaKnown RBP21.33■■□□□ 1.01
CCHCR1-229ENST00000512418 CRYBG1Q9Y4K1 1723 aa21.32■■□□□ 1
CCHCR1-229ENST00000512418 NRAPQ86VF7 1730 aa21.32■■□□□ 1
CCHCR1-229ENST00000512418 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
CCHCR1-229ENST00000512418 PAK3O75914 559 aaPredicted RBP21.31■■□□□ 1
CCHCR1-229ENST00000512418 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
CCHCR1-229ENST00000512418 BRWD3Q6RI45 1802 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms