RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 FRAT1Q92837 279 aaPredicted RBP11.69□□□□□ -0.54
SNF8-210ENST00000511214 ADGRL1O94910 1474 aa11.69□□□□□ -0.54
SNF8-210ENST00000511214 USP19O94966 1318 aa11.68□□□□□ -0.54
SNF8-210ENST00000511214 RGS3P49796 1198 aa11.68□□□□□ -0.54
SNF8-210ENST00000511214 WWC1Q8IX03 1113 aa11.68□□□□□ -0.54
SNF8-210ENST00000511214 RUNDC1Q96C34 613 aa11.68□□□□□ -0.54
SNF8-210ENST00000511214 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
SNF8-210ENST00000511214 SHPRHQ149N8 1683 aa11.68□□□□□ -0.54
SNF8-210ENST00000511214 ERCC6L2Q5T890 1561 aa11.67□□□□□ -0.54
SNF8-210ENST00000511214 ADGRB3O60242 1522 aa11.67□□□□□ -0.54
SNF8-210ENST00000511214 BCAR3O75815 825 aa11.67□□□□□ -0.54
SNF8-210ENST00000511214 CT47B1P0C2W7 299 aaPredicted RBP11.67□□□□□ -0.54
SNF8-210ENST00000511214 CCDC146Q8IYE0 955 aa11.67□□□□□ -0.54
SNF8-210ENST00000511214 CARD14Q9BXL6 1004 aa11.67□□□□□ -0.54
SNF8-210ENST00000511214 NSD2O96028 1365 aa11.67□□□□□ -0.54
SNF8-210ENST00000511214 ZC3H13Q5T200 1668 aaKnown RBP11.66□□□□□ -0.54
SNF8-210ENST00000511214 NLRP1Q9C000 1473 aa11.66□□□□□ -0.54
SNF8-210ENST00000511214 ZBTB22O15209 634 aa11.66□□□□□ -0.54
SNF8-210ENST00000511214 IGHDP01880 384 aa11.66□□□□□ -0.54
SNF8-210ENST00000511214 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
SNF8-210ENST00000511214 UPF2Q9HAU5 1272 aaKnown RBP11.65□□□□□ -0.54
SNF8-210ENST00000511214 RPGRIP1LQ68CZ1 1315 aa11.64□□□□□ -0.55
SNF8-210ENST00000511214 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
SNF8-210ENST00000511214 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
SNF8-210ENST00000511214 FAM43AQ8N2R8 423 aa11.64□□□□□ -0.55
SNF8-210ENST00000511214 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
SNF8-210ENST00000511214 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
SNF8-210ENST00000511214 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
SNF8-210ENST00000511214 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
SNF8-210ENST00000511214 L1TD1Q5T7N2 865 aaKnown RBP11.63□□□□□ -0.55
SNF8-210ENST00000511214 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
SNF8-210ENST00000511214 RWDD1Q9H446 243 aaPredicted RBP11.63□□□□□ -0.55
SNF8-210ENST00000511214 MORC1Q86VD1 984 aa11.62□□□□□ -0.55
SNF8-210ENST00000511214 AFAP1Q8N556 730 aa11.62□□□□□ -0.55
SNF8-210ENST00000511214 MYH16Q9H6N6 1097 aa11.62□□□□□ -0.55
SNF8-210ENST00000511214 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
SNF8-210ENST00000511214 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
SNF8-210ENST00000511214 ADGRB2O60241 1585 aa11.62□□□□□ -0.55
SNF8-210ENST00000511214 MROH2AA6NES4 1674 aa11.62□□□□□ -0.55
SNF8-210ENST00000511214 PPRC1Q5VV67 1664 aaKnown RBP11.62□□□□□ -0.55
SNF8-210ENST00000511214 ADGRF5Q8IZF2 1346 aa11.61□□□□□ -0.55
SNF8-210ENST00000511214 TBC1D32Q96NH3 1257 aa11.61□□□□□ -0.55
SNF8-210ENST00000511214 COG6Q9Y2V7 657 aa11.61□□□□□ -0.55
SNF8-210ENST00000511214 ADGRB1O14514 1584 aa11.61□□□□□ -0.55
SNF8-210ENST00000511214 QRICH2Q9H0J4 1663 aa11.61□□□□□ -0.55
SNF8-210ENST00000511214 PPLO60437 1756 aa11.6□□□□□ -0.55
SNF8-210ENST00000511214 KIF3BO15066 747 aa11.6□□□□□ -0.55
SNF8-210ENST00000511214 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
SNF8-210ENST00000511214 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
SNF8-210ENST00000511214 PANK1Q8TE04 598 aa11.59□□□□□ -0.55
SNF8-210ENST00000511214 ANTXR1Q9H6X2 564 aa11.59□□□□□ -0.55
SNF8-210ENST00000511214 NOS1P29475 1434 aa11.59□□□□□ -0.55
SNF8-210ENST00000511214 UGGT1Q9NYU2 1555 aa11.58□□□□□ -0.55
SNF8-210ENST00000511214 ANKRD36BQ8N2N9 1353 aa11.57□□□□□ -0.56
SNF8-210ENST00000511214 ABCC11Q96J66 1382 aa11.57□□□□□ -0.56
SNF8-210ENST00000511214 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
SNF8-210ENST00000511214 ZKSCAN2Q63HK3 967 aa11.57□□□□□ -0.56
SNF8-210ENST00000511214 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
SNF8-210ENST00000511214 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
SNF8-210ENST00000511214 PDZRN3Q9UPQ7 1066 aa11.57□□□□□ -0.56
SNF8-210ENST00000511214 CFAP74Q9C0B2 1584 aa11.57□□□□□ -0.56
SNF8-210ENST00000511214 IL16Q14005 1332 aa11.57□□□□□ -0.56
SNF8-210ENST00000511214 KIDINS220Q9ULH0 1771 aa11.56□□□□□ -0.56
SNF8-210ENST00000511214 SEC24BO95487 1268 aa11.56□□□□□ -0.56
SNF8-210ENST00000511214 HDAC1Q13547 482 aaPredicted RBP11.56□□□□□ -0.56
SNF8-210ENST00000511214 PCDHB15Q9Y5E8 787 aa11.56□□□□□ -0.56
SNF8-210ENST00000511214 MED14O60244 1454 aa11.56□□□□□ -0.56
SNF8-210ENST00000511214 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
SNF8-210ENST00000511214 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
SNF8-210ENST00000511214 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
SNF8-210ENST00000511214 HECW2Q9P2P5 1572 aa11.54□□□□□ -0.56
SNF8-210ENST00000511214 MLH3Q9UHC1 1453 aa11.54□□□□□ -0.56
SNF8-210ENST00000511214 ZFYVE9O95405 1425 aa11.53□□□□□ -0.56
SNF8-210ENST00000511214 RLBP1P12271 317 aa11.53□□□□□ -0.56
SNF8-210ENST00000511214 MTHFSP49914 203 aa11.53□□□□□ -0.56
SNF8-210ENST00000511214 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
SNF8-210ENST00000511214 TBC1D2Q9BYX2 928 aa11.53□□□□□ -0.56
SNF8-210ENST00000511214 PNNQ9H307 717 aaKnown RBP11.53□□□□□ -0.56
SNF8-210ENST00000511214 CHMP5Q9NZZ3 219 aa11.53□□□□□ -0.56
SNF8-210ENST00000511214 DDX19BQ9UMR2 479 aa11.53□□□□□ -0.56
SNF8-210ENST00000511214 GLI2P10070 1586 aa11.53□□□□□ -0.56
SNF8-210ENST00000511214 PIK3C2BO00750 1634 aa11.53□□□□□ -0.56
SNF8-210ENST00000511214 NPATQ14207 1427 aa11.52□□□□□ -0.56
SNF8-210ENST00000511214 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
SNF8-210ENST00000511214 TULP4Q9NRJ4 1543 aa11.51□□□□□ -0.57
SNF8-210ENST00000511214 SMC5Q8IY18 1101 aa11.51□□□□□ -0.57
SNF8-210ENST00000511214 FTSJ3Q8IY81 847 aaKnown RBP11.51□□□□□ -0.57
SNF8-210ENST00000511214 SLC12A5Q9H2X9 1139 aa11.51□□□□□ -0.57
SNF8-210ENST00000511214 POGKQ9P215 609 aa11.51□□□□□ -0.57
SNF8-210ENST00000511214 COL3A1P02461 1466 aaPredicted RBP11.51□□□□□ -0.57
SNF8-210ENST00000511214 ANKRD26Q9UPS8 1709 aa11.5□□□□□ -0.57
SNF8-210ENST00000511214 FSD2A1L4K1 749 aa11.5□□□□□ -0.57
SNF8-210ENST00000511214 EIF5BO60841 1220 aaKnown RBP11.5□□□□□ -0.57
SNF8-210ENST00000511214 PTMSP20962 102 aa11.5□□□□□ -0.57
SNF8-210ENST00000511214 MCM4P33991 863 aa11.5□□□□□ -0.57
SNF8-210ENST00000511214 ZNF428Q96B54 188 aa11.5□□□□□ -0.57
SNF8-210ENST00000511214 C22orf23Q9BZE7 217 aa11.5□□□□□ -0.57
SNF8-210ENST00000511214 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
SNF8-210ENST00000511214 TRAK1Q9UPV9 953 aa11.5□□□□□ -0.57
SNF8-210ENST00000511214 ABCC3O15438 1527 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms