RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
CALCOCO2-217ENST00000510356 EFCAB6Q5THR3 1501 aa13.1□□□□□ -0.31
CALCOCO2-217ENST00000510356 IDI1Q13907 227 aa13.1□□□□□ -0.31
CALCOCO2-217ENST00000510356 C14orf37Q86TY3 774 aa13.1□□□□□ -0.31
CALCOCO2-217ENST00000510356 TRPC6Q9Y210 931 aa13.1□□□□□ -0.31
CALCOCO2-217ENST00000510356 MAST1Q9Y2H9 1570 aa13.1□□□□□ -0.31
CALCOCO2-217ENST00000510356 ATF3P18847 181 aa13.09□□□□□ -0.31
CALCOCO2-217ENST00000510356 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-217ENST00000510356 TET3O43151 1660 aa13.08□□□□□ -0.31
CALCOCO2-217ENST00000510356 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.31
CALCOCO2-217ENST00000510356 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
CALCOCO2-217ENST00000510356 SLC52A1Q9NWF4 448 aa13.08□□□□□ -0.32
CALCOCO2-217ENST00000510356 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
CALCOCO2-217ENST00000510356 LRP6O75581 1613 aa13.08□□□□□ -0.32
CALCOCO2-217ENST00000510356 KDM5AP29375 1690 aaKnown RBP13.08□□□□□ -0.32
CALCOCO2-217ENST00000510356 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
CALCOCO2-217ENST00000510356 COL16A1Q07092 1604 aaPredicted RBP13.07□□□□□ -0.32
CALCOCO2-217ENST00000510356 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
CALCOCO2-217ENST00000510356 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
CALCOCO2-217ENST00000510356 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
CALCOCO2-217ENST00000510356 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
CALCOCO2-217ENST00000510356 NUTM2BA6NNL0 878 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO2-217ENST00000510356 NUTM2EB1AL46 878 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO2-217ENST00000510356 NUTM2AQ8IVF1 878 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO2-217ENST00000510356 AFF2P51816 1311 aa13.06□□□□□ -0.32
CALCOCO2-217ENST00000510356 CFAP65Q6ZU64 1925 aaKnown RBP13.05□□□□□ -0.32
CALCOCO2-217ENST00000510356 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
CALCOCO2-217ENST00000510356 CEP152O94986 1710 aa13.05□□□□□ -0.32
CALCOCO2-217ENST00000510356 PPP1R15AO75807 674 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO2-217ENST00000510356 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO2-217ENST00000510356 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
CALCOCO2-217ENST00000510356 BBXQ8WY36 941 aaPredicted RBP13.04□□□□□ -0.32
CALCOCO2-217ENST00000510356 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
CALCOCO2-217ENST00000510356 MYOM3Q5VTT5 1437 aa13.04□□□□□ -0.32
CALCOCO2-217ENST00000510356 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-217ENST00000510356 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
CALCOCO2-217ENST00000510356 ATAD2Q6PL18 1390 aa13.03□□□□□ -0.32
CALCOCO2-217ENST00000510356 PLEKHG1Q9ULL1 1385 aa13.03□□□□□ -0.32
CALCOCO2-217ENST00000510356 SHPRHQ149N8 1683 aa13.02□□□□□ -0.32
CALCOCO2-217ENST00000510356 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-217ENST00000510356 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
CALCOCO2-217ENST00000510356 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
CALCOCO2-217ENST00000510356 CCDC125Q86Z20 511 aa13.01□□□□□ -0.33
CALCOCO2-217ENST00000510356 TIE1P35590 1138 aa13□□□□□ -0.33
CALCOCO2-217ENST00000510356 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
CALCOCO2-217ENST00000510356 PIK3R4Q99570 1358 aa12.99□□□□□ -0.33
CALCOCO2-217ENST00000510356 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
CALCOCO2-217ENST00000510356 C8orf37Q96NL8 207 aa12.99□□□□□ -0.33
CALCOCO2-217ENST00000510356 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
CALCOCO2-217ENST00000510356 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
CALCOCO2-217ENST00000510356 RGS12O14924 1447 aa12.98□□□□□ -0.33
CALCOCO2-217ENST00000510356 NOS1P29475 1434 aa12.98□□□□□ -0.33
CALCOCO2-217ENST00000510356 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
CALCOCO2-217ENST00000510356 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
CALCOCO2-217ENST00000510356 TTLL13PA6NNM8 815 aa12.97□□□□□ -0.33
CALCOCO2-217ENST00000510356 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
CALCOCO2-217ENST00000510356 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO2-217ENST00000510356 CHD2O14647 1828 aaKnown RBP12.96□□□□□ -0.33
CALCOCO2-217ENST00000510356 DCCP43146 1447 aa12.96□□□□□ -0.34
CALCOCO2-217ENST00000510356 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
CALCOCO2-217ENST00000510356 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
CALCOCO2-217ENST00000510356 RIMS2Q9UQ26 1411 aa12.95□□□□□ -0.34
CALCOCO2-217ENST00000510356 TRPC5Q9UL62 973 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO2-217ENST00000510356 DIP2AQ14689 1571 aa12.94□□□□□ -0.34
CALCOCO2-217ENST00000510356 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
CALCOCO2-217ENST00000510356 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
CALCOCO2-217ENST00000510356 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
CALCOCO2-217ENST00000510356 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.92□□□□□ -0.34
CALCOCO2-217ENST00000510356 USP21Q9UK80 565 aa12.92□□□□□ -0.34
CALCOCO2-217ENST00000510356 ATMINO43313 823 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO2-217ENST00000510356 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
CALCOCO2-217ENST00000510356 ABCC5O15440 1437 aa12.9□□□□□ -0.34
CALCOCO2-217ENST00000510356 ASXL1Q8IXJ9 1541 aa12.9□□□□□ -0.34
CALCOCO2-217ENST00000510356 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO2-217ENST00000510356 GOLGA2Q08379 1002 aa12.9□□□□□ -0.34
CALCOCO2-217ENST00000510356 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO2-217ENST00000510356 DCBLD2Q96PD2 775 aa12.9□□□□□ -0.34
CALCOCO2-217ENST00000510356 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
CALCOCO2-217ENST00000510356 SRCAPQ6ZRS2 3230 aa12.9□□□□□ -0.34
CALCOCO2-217ENST00000510356 ADAMTS2O95450 1211 aa12.89□□□□□ -0.35
CALCOCO2-217ENST00000510356 ASTLQ6HA08 431 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-217ENST00000510356 TRIM35Q9UPQ4 493 aa12.89□□□□□ -0.35
CALCOCO2-217ENST00000510356 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
CALCOCO2-217ENST00000510356 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
CALCOCO2-217ENST00000510356 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
CALCOCO2-217ENST00000510356 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO2-217ENST00000510356 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
CALCOCO2-217ENST00000510356 TRPM2O94759 1503 aa12.87□□□□□ -0.35
CALCOCO2-217ENST00000510356 MST1RQ04912 1400 aa12.87□□□□□ -0.35
CALCOCO2-217ENST00000510356 DAPK1P53355 1430 aa12.86□□□□□ -0.35
CALCOCO2-217ENST00000510356 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
CALCOCO2-217ENST00000510356 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
CALCOCO2-217ENST00000510356 PTCH1Q13635 1447 aa12.85□□□□□ -0.35
CALCOCO2-217ENST00000510356 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
CALCOCO2-217ENST00000510356 KANK4Q5T7N3 995 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO2-217ENST00000510356 CHIC2Q9UKJ5 165 aa12.84□□□□□ -0.35
CALCOCO2-217ENST00000510356 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
CALCOCO2-217ENST00000510356 SOX12O15370 315 aa12.83□□□□□ -0.36
CALCOCO2-217ENST00000510356 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO2-217ENST00000510356 MFRPQ9BY79 579 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms