RNA–Protein interactions for RNA: ENST00000510196.6

GYPB-211, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 508 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-211ENST00000510196 CFAP44Q96MT7 982 aa7.46□□□□□ -1.22
GYPB-211ENST00000510196 SLC27A5Q9Y2P5 690 aa7.46□□□□□ -1.22
GYPB-211ENST00000510196 J3QL48 77 aa7.45□□□□□ -1.22
GYPB-211ENST00000510196 GRIPAP1Q4V328 841 aa7.45□□□□□ -1.22
GYPB-211ENST00000510196 PAXIP1Q6ZW49 1069 aaPredicted RBP7.45□□□□□ -1.22
GYPB-211ENST00000510196 IRF7Q92985 503 aa7.45□□□□□ -1.22
GYPB-211ENST00000510196 MRGPRX2Q96LB1 330 aa7.45□□□□□ -1.22
GYPB-211ENST00000510196 FECHP22830 423 aa7.44□□□□□ -1.22
GYPB-211ENST00000510196 TRIM32Q13049 653 aa7.44□□□□□ -1.22
GYPB-211ENST00000510196 METTL3Q86U44 580 aaKnown RBP7.44□□□□□ -1.22
GYPB-211ENST00000510196 HPS1Q92902 700 aa7.43□□□□□ -1.22
GYPB-211ENST00000510196 DDX11L8A8MPP1 907 aa7.42□□□□□ -1.22
GYPB-211ENST00000510196 GMPRP36959 345 aa7.42□□□□□ -1.22
GYPB-211ENST00000510196 GCGRP47871 477 aa7.42□□□□□ -1.22
GYPB-211ENST00000510196 SULF1Q8IWU6 871 aa7.42□□□□□ -1.22
GYPB-211ENST00000510196 HIC1Q14526 733 aa7.41□□□□□ -1.22
GYPB-211ENST00000510196 Q3C1V9 767 aa7.41□□□□□ -1.22
GYPB-211ENST00000510196 PRDM9Q9NQV7 894 aa7.41□□□□□ -1.22
GYPB-211ENST00000510196 MMP16P51512 607 aa7.39□□□□□ -1.23
GYPB-211ENST00000510196 RC3H1Q5TC82 1133 aaKnown RBP7.39□□□□□ -1.23
GYPB-211ENST00000510196 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
GYPB-211ENST00000510196 WNT7BP56706 349 aa7.38□□□□□ -1.23
GYPB-211ENST00000510196 SUZ12Q15022 739 aaKnown RBP7.37□□□□□ -1.23
GYPB-211ENST00000510196 RNF19BQ6ZMZ0 732 aa7.36□□□□□ -1.23
GYPB-211ENST00000510196 H3BM21 787 aa7.35□□□□□ -1.23
GYPB-211ENST00000510196 ALDH1A1P00352 501 aa7.35□□□□□ -1.23
GYPB-211ENST00000510196 CCDC24Q8N4L8 307 aa7.34□□□□□ -1.23
GYPB-211ENST00000510196 KCNV2Q8TDN2 545 aa7.34□□□□□ -1.23
GYPB-211ENST00000510196 USB1Q9BQ65 265 aaKnown RBP7.34□□□□□ -1.23
GYPB-211ENST00000510196 GNPATO15228 680 aa7.33□□□□□ -1.24
GYPB-211ENST00000510196 CAPN5O15484 640 aaPredicted RBP7.33□□□□□ -1.24
GYPB-211ENST00000510196 DXOO77932 396 aaKnown RBP7.33□□□□□ -1.24
GYPB-211ENST00000510196 SKOR1P84550 965 aa7.31□□□□□ -1.24
GYPB-211ENST00000510196 WASF2Q9Y6W5 498 aa7.31□□□□□ -1.24
GYPB-211ENST00000510196 VEGFBP49765 207 aa7.3□□□□□ -1.24
GYPB-211ENST00000510196 KCNMA1Q12791 1236 aa7.3□□□□□ -1.24
GYPB-211ENST00000510196 SMYD5Q6GMV2 418 aa7.3□□□□□ -1.24
GYPB-211ENST00000510196 TRIM46Q7Z4K8 759 aa7.3□□□□□ -1.24
GYPB-211ENST00000510196 P3H3Q8IVL6 736 aa7.29□□□□□ -1.24
GYPB-211ENST00000510196 ERBB4Q15303 1308 aa7.28□□□□□ -1.24
GYPB-211ENST00000510196 SIAH2O43255 324 aa7.28□□□□□ -1.24
GYPB-211ENST00000510196 SEMA3EO15041 775 aa7.27□□□□□ -1.25
GYPB-211ENST00000510196 BMP1P13497 986 aa7.27□□□□□ -1.25
GYPB-211ENST00000510196 EHBP1Q8NDI1 1231 aa7.27□□□□□ -1.25
GYPB-211ENST00000510196 USP46P62068 366 aa7.26□□□□□ -1.25
GYPB-211ENST00000510196 ZFP42Q96MM3 310 aa7.26□□□□□ -1.25
GYPB-211ENST00000510196 KDM4AO75164 1064 aa7.25□□□□□ -1.25
GYPB-211ENST00000510196 SCARF1Q14162 830 aa7.25□□□□□ -1.25
GYPB-211ENST00000510196 NLRP7Q8WX94 980 aa7.25□□□□□ -1.25
GYPB-211ENST00000510196 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
GYPB-211ENST00000510196 VSIG8P0DPA2 414 aa7.23□□□□□ -1.25
GYPB-211ENST00000510196 CD46P15529 392 aa7.23□□□□□ -1.25
GYPB-211ENST00000510196 RBM26Q5T8P6 1007 aaKnown RBP7.23□□□□□ -1.25
GYPB-211ENST00000510196 TMEM151AQ8N4L1 468 aa7.23□□□□□ -1.25
GYPB-211ENST00000510196 PLEKHG3A1L390 1219 aa7.22□□□□□ -1.25
GYPB-211ENST00000510196 JUNDP17535 347 aa7.22□□□□□ -1.25
GYPB-211ENST00000510196 PHOX2BQ99453 314 aa7.22□□□□□ -1.25
GYPB-211ENST00000510196 MRPL14Q6P1L8 145 aaKnown RBP7.2□□□□□ -1.26
GYPB-211ENST00000510196 NUDT12Q9BQG2 462 aa7.2□□□□□ -1.26
GYPB-211ENST00000510196 TSHZ2Q9NRE2 1034 aa7.2□□□□□ -1.26
GYPB-211ENST00000510196 TESPA1A2RU30 521 aaPredicted RBP7.19□□□□□ -1.26
GYPB-211ENST00000510196 GDF11O95390 407 aa7.19□□□□□ -1.26
GYPB-211ENST00000510196 MPNDQ8N594 471 aa7.19□□□□□ -1.26
GYPB-211ENST00000510196 RNF225M0QZC1 329 aaPredicted RBP7.18□□□□□ -1.26
GYPB-211ENST00000510196 SH3BP2P78314 561 aa7.18□□□□□ -1.26
GYPB-211ENST00000510196 PTCRAQ6ISU1 281 aaPredicted RBP7.18□□□□□ -1.26
GYPB-211ENST00000510196 GPR37O15354 613 aa7.17□□□□□ -1.26
GYPB-211ENST00000510196 GSK3AP49840 483 aa7.17□□□□□ -1.26
GYPB-211ENST00000510196 RASSF7Q02833 373 aa7.17□□□□□ -1.26
GYPB-211ENST00000510196 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
GYPB-211ENST00000510196 RETREG3Q86VR2 466 aa7.16□□□□□ -1.26
GYPB-211ENST00000510196 PURBQ96QR8 312 aaKnown RBP7.16□□□□□ -1.26
GYPB-211ENST00000510196 HOXA2O43364 376 aa7.15□□□□□ -1.26
GYPB-211ENST00000510196 NNTQ13423 1086 aa7.15□□□□□ -1.26
GYPB-211ENST00000510196 MAN1A2O60476 641 aa7.13□□□□□ -1.27
GYPB-211ENST00000510196 ADH1CP00326 375 aa7.13□□□□□ -1.27
GYPB-211ENST00000510196 IGHA1P01876 353 aa7.13□□□□□ -1.27
GYPB-211ENST00000510196 CCNYL3P0C7X3 344 aa7.13□□□□□ -1.27
GYPB-211ENST00000510196 WDR4P57081 412 aaKnown RBP7.13□□□□□ -1.27
GYPB-211ENST00000510196 HLA-CQ95604 372 aa7.13□□□□□ -1.27
GYPB-211ENST00000510196 PPFIA3O75145 1194 aa7.12□□□□□ -1.27
GYPB-211ENST00000510196 MS4A1P11836 297 aa7.12□□□□□ -1.27
GYPB-211ENST00000510196 SYMPKQ92797 1274 aaKnown RBP7.12□□□□□ -1.27
GYPB-211ENST00000510196 EVA1BQ9NVM1 165 aa7.12□□□□□ -1.27
GYPB-211ENST00000510196 ADAMTS8Q9UP79 889 aa7.12□□□□□ -1.27
GYPB-211ENST00000510196 SOBPA7XYQ1 873 aa7.11□□□□□ -1.27
GYPB-211ENST00000510196 TIMP2P16035 220 aa7.11□□□□□ -1.27
GYPB-211ENST00000510196 BAP1Q92560 729 aa7.11□□□□□ -1.27
GYPB-211ENST00000510196 PTPRNQ16849 979 aa7.1□□□□□ -1.27
GYPB-211ENST00000510196 NUTM1Q86Y26 1132 aa7.1□□□□□ -1.27
GYPB-211ENST00000510196 UNC93B1Q9H1C4 597 aa7.1□□□□□ -1.27
GYPB-211ENST00000510196 UPP2O95045 317 aa7.09□□□□□ -1.27
GYPB-211ENST00000510196 GUCA2AQ02747 115 aa7.09□□□□□ -1.27
GYPB-211ENST00000510196 KCNH2Q12809 1159 aa7.09□□□□□ -1.27
GYPB-211ENST00000510196 AMER1Q5JTC6 1135 aaPredicted RBP7.09□□□□□ -1.27
GYPB-211ENST00000510196 GPIHBP1Q8IV16 184 aa7.09□□□□□ -1.27
GYPB-211ENST00000510196 FAM174AQ8TBP5 190 aa7.09□□□□□ -1.27
GYPB-211ENST00000510196 KLF16Q9BXK1 252 aaPredicted RBP7.09□□□□□ -1.27
GYPB-211ENST00000510196 TLL2Q9Y6L7 1015 aa7.09□□□□□ -1.27
GYPB-211ENST00000510196 MDM2Q00987 491 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms