RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 ORAI2Q96SN7 254 aa31.21■■■□□ 2.59
LIN54-208ENST00000509748 PLEKHH1Q9ULM0 1364 aa31.2■■■□□ 2.59
LIN54-208ENST00000509748 POTEAQ6S8J7 498 aa31.2■■■□□ 2.59
LIN54-208ENST00000509748 LAMC1P11047 1609 aa31.19■■■□□ 2.58
LIN54-208ENST00000509748 CDC42BPGQ6DT37 1551 aa31.18■■■□□ 2.58
LIN54-208ENST00000509748 SIRT1Q96EB6 747 aa31.17■■■□□ 2.58
LIN54-208ENST00000509748 LRRC59Q96AG4 307 aaKnown RBP31.16■■■□□ 2.58
LIN54-208ENST00000509748 SOS2Q07890 1332 aaPredicted RBP31.12■■■□□ 2.57
LIN54-208ENST00000509748 DHX57Q6P158 1386 aaKnown RBP31.12■■■□□ 2.57
LIN54-208ENST00000509748 DCAF11Q8TEB1 546 aa31.1■■■□□ 2.57
LIN54-208ENST00000509748 PNPLA6Q8IY17 1366 aa31.09■■■□□ 2.57
LIN54-208ENST00000509748 KDM2AQ9Y2K7 1162 aa31.09■■■□□ 2.57
LIN54-208ENST00000509748 ADGRB1O14514 1584 aa31.08■■■□□ 2.57
LIN54-208ENST00000509748 NUTM2BA6NNL0 878 aaPredicted RBP31.06■■■□□ 2.56
LIN54-208ENST00000509748 NUTM2EB1AL46 878 aaPredicted RBP31.06■■■□□ 2.56
LIN54-208ENST00000509748 ESCO1Q5FWF5 840 aa31.06■■■□□ 2.56
LIN54-208ENST00000509748 NUTM2AQ8IVF1 878 aaPredicted RBP31.06■■■□□ 2.56
LIN54-208ENST00000509748 STAC3Q96MF2 364 aa31.06■■■□□ 2.56
LIN54-208ENST00000509748 MEX3CQ5U5Q3 659 aaKnown RBP31.05■■■□□ 2.56
LIN54-208ENST00000509748 FMN2Q9NZ56 1722 aa31.04■■■□□ 2.56
LIN54-208ENST00000509748 NUTM2FA1L443 756 aa31.03■■■□□ 2.56
LIN54-208ENST00000509748 DLC1Q96QB1 1528 aa31.03■■■□□ 2.56
LIN54-208ENST00000509748 PRAM1Q96QH2 718 aa31.02■■■□□ 2.56
LIN54-208ENST00000509748 PXDNQ92626 1479 aa30.98■■■□□ 2.55
LIN54-208ENST00000509748 FOXO3O43524 673 aa30.98■■■□□ 2.55
LIN54-208ENST00000509748 NPHP3Q7Z494 1330 aa30.98■■■□□ 2.55
LIN54-208ENST00000509748 SAFB2Q14151 953 aaKnown RBP eCLIP30.97■■■□□ 2.55
LIN54-208ENST00000509748 ZNF772Q68DY9 489 aaPredicted RBP30.96■■■□□ 2.55
LIN54-208ENST00000509748 TRAK1Q9UPV9 953 aa30.95■■■□□ 2.55
LIN54-208ENST00000509748 RGPD8O14715 1765 aaPredicted RBP30.93■■■□□ 2.54
LIN54-208ENST00000509748 XPCQ01831 940 aaPredicted RBP30.93■■■□□ 2.54
LIN54-208ENST00000509748 POGKQ9P215 609 aa30.93■■■□□ 2.54
LIN54-208ENST00000509748 AFF2P51816 1311 aa30.91■■■□□ 2.54
LIN54-208ENST00000509748 COL22A1Q8NFW1 1626 aaPredicted RBP30.91■■■□□ 2.54
LIN54-208ENST00000509748 ADGRB2O60241 1585 aa30.88■■■□□ 2.53
LIN54-208ENST00000509748 KIF1AQ12756 1690 aa30.88■■■□□ 2.53
LIN54-208ENST00000509748 C8orf37Q96NL8 207 aa30.87■■■□□ 2.53
LIN54-208ENST00000509748 ADAMTS2O95450 1211 aa30.86■■■□□ 2.53
LIN54-208ENST00000509748 USP32Q8NFA0 1604 aa30.85■■■□□ 2.53
LIN54-208ENST00000509748 PHF8Q9UPP1 1060 aa30.85■■■□□ 2.53
LIN54-208ENST00000509748 MINK1Q8N4C8 1332 aaPredicted RBP30.83■■■□□ 2.53
LIN54-208ENST00000509748 HIRIP3Q9BW71 556 aaPredicted RBP30.83■■■□□ 2.53
LIN54-208ENST00000509748 ANKARQ7Z5J8 1434 aa30.82■■■□□ 2.52
LIN54-208ENST00000509748 KRT28Q7Z3Y7 464 aa30.82■■■□□ 2.52
LIN54-208ENST00000509748 SPATA31A3Q5VYP0 1347 aa30.81■■■□□ 2.52
LIN54-208ENST00000509748 ARHGEF28Q8N1W1 1705 aaKnown RBP30.81■■■□□ 2.52
LIN54-208ENST00000509748 KIAA1210Q9ULL0 1709 aa30.81■■■□□ 2.52
LIN54-208ENST00000509748 RXRBP28702 533 aa30.8■■■□□ 2.52
LIN54-208ENST00000509748 NGLY1Q96IV0 654 aa30.8■■■□□ 2.52
LIN54-208ENST00000509748 PRR36Q9H6K5 1346 aa30.78■■■□□ 2.52
LIN54-208ENST00000509748 NBPF1Q3BBV0 1214 aa30.78■■■□□ 2.52
LIN54-208ENST00000509748 WASLO00401 505 aaPredicted RBP30.77■■■□□ 2.52
LIN54-208ENST00000509748 SIN3AQ96ST3 1273 aa30.77■■■□□ 2.52
LIN54-208ENST00000509748 QTRT2Q9H974 415 aaKnown RBP30.77■■■□□ 2.52
LIN54-208ENST00000509748 FNBP4Q8N3X1 1017 aaPredicted RBP30.76■■■□□ 2.51
LIN54-208ENST00000509748 PMFBP1Q8TBY8 1022 aa30.74■■■□□ 2.51
LIN54-208ENST00000509748 L3MBTL2Q969R5 705 aa30.74■■■□□ 2.51
LIN54-208ENST00000509748 TULP4Q9NRJ4 1543 aa30.73■■■□□ 2.51
LIN54-208ENST00000509748 CDK12Q9NYV4 1490 aaPredicted RBP30.73■■■□□ 2.51
LIN54-208ENST00000509748 SBNO1A3KN83 1393 aa30.72■■■□□ 2.51
LIN54-208ENST00000509748 PSME1Q06323 249 aa30.72■■■□□ 2.51
LIN54-208ENST00000509748 MARF1Q9Y4F3 1742 aaKnown RBP30.71■■■□□ 2.51
LIN54-208ENST00000509748 TNS3Q68CZ2 1445 aa30.71■■■□□ 2.51
LIN54-208ENST00000509748 EIF3AQ14152 1382 aaKnown RBP30.7■■■□□ 2.51
LIN54-208ENST00000509748 RBM6P78332 1123 aaKnown RBP30.7■■■□□ 2.51
LIN54-208ENST00000509748 USP21Q9UK80 565 aa30.7■■■□□ 2.51
LIN54-208ENST00000509748 BCL9LQ86UU0 1499 aa30.65■■■□□ 2.5
LIN54-208ENST00000509748 TRPM3Q9HCF6 1732 aaPredicted RBP30.64■■■□□ 2.5
LIN54-208ENST00000509748 NEUROD1Q13562 356 aa30.64■■■□□ 2.5
LIN54-208ENST00000509748 ATRNO75882 1429 aa30.64■■■□□ 2.49
LIN54-208ENST00000509748 ATP7BP35670 1465 aa30.63■■■□□ 2.49
LIN54-208ENST00000509748 CABLES1Q8TDN4 633 aa30.63■■■□□ 2.49
LIN54-208ENST00000509748 NUDT16Q96DE0 195 aaKnown RBP30.63■■■□□ 2.49
LIN54-208ENST00000509748 CDK19Q9BWU1 502 aa30.63■■■□□ 2.49
LIN54-208ENST00000509748 TRPC5Q9UL62 973 aaPredicted RBP30.63■■■□□ 2.49
LIN54-208ENST00000509748 RGS12O14924 1447 aa30.63■■■□□ 2.49
LIN54-208ENST00000509748 ARHGEF10O15013 1369 aa30.61■■■□□ 2.49
LIN54-208ENST00000509748 SLIT2O94813 1529 aa30.58■■■□□ 2.49
LIN54-208ENST00000509748 GPRASP1Q5JY77 1395 aa30.58■■■□□ 2.49
LIN54-208ENST00000509748 LMOD2Q6P5Q4 547 aa30.58■■■□□ 2.49
LIN54-208ENST00000509748 ALS2Q96Q42 1657 aa30.58■■■□□ 2.49
LIN54-208ENST00000509748 ABCA3Q99758 1704 aa30.57■■■□□ 2.48
LIN54-208ENST00000509748 UPF1Q92900 1129 aaKnown RBP eCLIP30.57■■■□□ 2.48
LIN54-208ENST00000509748 ITSN1Q15811 1721 aa30.56■■■□□ 2.48
LIN54-208ENST00000509748 NGDNQ8NEJ9 315 aaKnown RBP30.56■■■□□ 2.48
LIN54-208ENST00000509748 TRPM1Q7Z4N2 1603 aa30.55■■■□□ 2.48
LIN54-208ENST00000509748 CENPJQ9HC77 1338 aaPredicted RBP30.54■■■□□ 2.48
LIN54-208ENST00000509748 PLEKHG5O94827 1062 aa30.54■■■□□ 2.48
LIN54-208ENST00000509748 TRIM26Q12899 539 aaPredicted RBP30.54■■■□□ 2.48
LIN54-208ENST00000509748 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.53■■■□□ 2.48
LIN54-208ENST00000509748 TOPAZ1Q8N9V7 1692 aa30.52■■■□□ 2.48
LIN54-208ENST00000509748 UNC5CLQ8IV45 518 aa30.52■■■□□ 2.48
LIN54-208ENST00000509748 CCDC61Q9Y6R9 512 aa30.52■■■□□ 2.48
LIN54-208ENST00000509748 PLEKHG3A1L390 1219 aa30.5■■■□□ 2.47
LIN54-208ENST00000509748 HAP1P54257 671 aaPredicted RBP30.5■■■□□ 2.47
LIN54-208ENST00000509748 NBPF8Q3BBV2 869 aa30.5■■■□□ 2.47
LIN54-208ENST00000509748 POLR3AO14802 1390 aaPredicted RBP30.5■■■□□ 2.47
LIN54-208ENST00000509748 GJD4Q96KN9 370 aaPredicted RBP30.49■■■□□ 2.47
LIN54-208ENST00000509748 QRICH2Q9H0J4 1663 aa30.48■■■□□ 2.47
LIN54-208ENST00000509748 FAM83GA6ND36 823 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms