RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	RALGAPB	Q86X10	1494 aa		13.32	□□□□□ -0.28
RACK1-222	ENST00000509535	PSD	A5PKW4	1024 aa	Predicted RBP	13.32	□□□□□ -0.28
RACK1-222	ENST00000509535	HRC	P23327	699 aa		13.3	□□□□□ -0.28
RACK1-222	ENST00000509535	PXDN	Q92626	1479 aa		13.29	□□□□□ -0.28
RACK1-222	ENST00000509535	SLIT2	O94813	1529 aa		13.28	□□□□□ -0.28
RACK1-222	ENST00000509535	PLCH1	Q4KWH8	1693 aa		13.28	□□□□□ -0.28
RACK1-222	ENST00000509535	KIF1B	O60333	1816 aa		13.27	□□□□□ -0.28
RACK1-222	ENST00000509535	ZNF326	Q5BKZ1	582 aa	Known RBP	13.27	□□□□□ -0.29
RACK1-222	ENST00000509535	UNC5CL	Q8IV45	518 aa		13.27	□□□□□ -0.29
RACK1-222	ENST00000509535	NEXMIF	Q5QGS0	1516 aa		13.27	□□□□□ -0.29
RACK1-222	ENST00000509535	RGPD1	P0DJD0	1748 aa		13.26	□□□□□ -0.29
RACK1-222	ENST00000509535	NPHP3	Q7Z494	1330 aa		13.26	□□□□□ -0.29
RACK1-222	ENST00000509535	USP32	Q8NFA0	1604 aa		13.26	□□□□□ -0.29
RACK1-222	ENST00000509535	NWD2	Q9ULI1	1742 aa		13.26	□□□□□ -0.29
RACK1-222	ENST00000509535	ROBO2	Q9HCK4	1378 aa		13.25	□□□□□ -0.29
RACK1-222	ENST00000509535	SEPT12	Q8IYM1	358 aa		13.25	□□□□□ -0.29
RACK1-222	ENST00000509535	BAG6	P46379	1132 aa		13.24	□□□□□ -0.29
RACK1-222	ENST00000509535	XPC	Q01831	940 aa	Predicted RBP	13.24	□□□□□ -0.29
RACK1-222	ENST00000509535	FAM50A	Q14320	339 aa	Known RBP	13.24	□□□□□ -0.29
RACK1-222	ENST00000509535	CDC42BPG	Q6DT37	1551 aa		13.24	□□□□□ -0.29
RACK1-222	ENST00000509535	YY1	P25490	414 aa		13.23	□□□□□ -0.29
RACK1-222	ENST00000509535	ESCO1	Q5FWF5	840 aa		13.23	□□□□□ -0.29
RACK1-222	ENST00000509535	CLTCL1	P53675	1640 aa		13.22	□□□□□ -0.29
RACK1-222	ENST00000509535	APLP2	Q06481	763 aa		13.22	□□□□□ -0.29
RACK1-222	ENST00000509535	ABCA3	Q99758	1704 aa		13.22	□□□□□ -0.29
RACK1-222	ENST00000509535	TNS1	Q9HBL0	1735 aa	Known RBP	13.22	□□□□□ -0.29
RACK1-222	ENST00000509535	NUP155	O75694	1391 aa		13.21	□□□□□ -0.29
RACK1-222	ENST00000509535	FOXO3	O43524	673 aa		13.21	□□□□□ -0.29
RACK1-222	ENST00000509535	KRT27	Q7Z3Y8	459 aa		13.21	□□□□□ -0.29
RACK1-222	ENST00000509535	R3HDM1	Q15032	1099 aa	Known RBP	13.2	□□□□□ -0.3
RACK1-222	ENST00000509535	HFM1	A2PYH4	1435 aa		13.2	□□□□□ -0.3
RACK1-222	ENST00000509535	PRAG1	Q86YV5	1406 aa		13.2	□□□□□ -0.3
RACK1-222	ENST00000509535	RGPD8	O14715	1765 aa	Predicted RBP	13.2	□□□□□ -0.3
RACK1-222	ENST00000509535	VPS72	Q15906	364 aa		13.19	□□□□□ -0.3
RACK1-222	ENST00000509535	KIF1A	Q12756	1690 aa		13.18	□□□□□ -0.3
RACK1-222	ENST00000509535	ONECUT3	O60422	494 aa	Predicted RBP	13.18	□□□□□ -0.3
RACK1-222	ENST00000509535	EN1	Q05925	392 aa	Predicted RBP	13.18	□□□□□ -0.3
RACK1-222	ENST00000509535	CCDC9	Q9Y3X0	531 aa	Known RBP	13.18	□□□□□ -0.3
RACK1-222	ENST00000509535	LRPPRC	P42704	1394 aa	Known RBP	13.18	□□□□□ -0.3
RACK1-222	ENST00000509535	NRAP	Q86VF7	1730 aa		13.17	□□□□□ -0.3
RACK1-222	ENST00000509535	PPL	O60437	1756 aa		13.17	□□□□□ -0.3
RACK1-222	ENST00000509535	FMN2	Q9NZ56	1722 aa		13.16	□□□□□ -0.3
RACK1-222	ENST00000509535	SPATA31A3	Q5VYP0	1347 aa		13.16	□□□□□ -0.3
RACK1-222	ENST00000509535		A0A0G2JS52	829 aa		13.16	□□□□□ -0.3
RACK1-222	ENST00000509535	MYT1	Q01538	1121 aa		13.16	□□□□□ -0.3
RACK1-222	ENST00000509535	NUTM2F	A1L443	756 aa		13.14	□□□□□ -0.31
RACK1-222	ENST00000509535	HAP1	P54257	671 aa	Predicted RBP	13.14	□□□□□ -0.31
RACK1-222	ENST00000509535	ROCK1	Q13464	1354 aa		13.14	□□□□□ -0.31
RACK1-222	ENST00000509535	CCDC144A	A2RUR9	1427 aa		13.13	□□□□□ -0.31
RACK1-222	ENST00000509535	NAIP	Q13075	1403 aa		13.13	□□□□□ -0.31
RACK1-222	ENST00000509535	IFT172	Q9UG01	1749 aa		13.13	□□□□□ -0.31
RACK1-222	ENST00000509535	DISP2	A7MBM2	1401 aa		13.13	□□□□□ -0.31
RACK1-222	ENST00000509535	VGF	O15240	615 aa	Predicted RBP	13.12	□□□□□ -0.31
RACK1-222	ENST00000509535	CABLES1	Q8TDN4	633 aa		13.12	□□□□□ -0.31
RACK1-222	ENST00000509535	RREB1	Q92766	1687 aa		13.12	□□□□□ -0.31
RACK1-222	ENST00000509535	ADGRB2	O60241	1585 aa		13.11	□□□□□ -0.31
RACK1-222	ENST00000509535	PLEKHG5	O94827	1062 aa		13.11	□□□□□ -0.31
RACK1-222	ENST00000509535	FAM98C	Q17RN3	349 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-222	ENST00000509535	FAM182B	Q5T319	152 aa		13.11	□□□□□ -0.31
RACK1-222	ENST00000509535	TNS3	Q68CZ2	1445 aa		13.11	□□□□□ -0.31
RACK1-222	ENST00000509535	NUP188	Q5SRE5	1749 aa		13.1	□□□□□ -0.31
RACK1-222	ENST00000509535	CAMTA1	Q9Y6Y1	1673 aa		13.1	□□□□□ -0.31
RACK1-222	ENST00000509535	EZH2	Q15910	746 aa	Known RBP	13.1	□□□□□ -0.31
RACK1-222	ENST00000509535	KRT28	Q7Z3Y7	464 aa		13.1	□□□□□ -0.31
RACK1-222	ENST00000509535	KNDC1	Q76NI1	1749 aa		13.1	□□□□□ -0.31
RACK1-222	ENST00000509535	THSD7A	Q9UPZ6	1657 aa		13.09	□□□□□ -0.31
RACK1-222	ENST00000509535	COL14A1	Q05707	1796 aa	Known RBP	13.08	□□□□□ -0.32
RACK1-222	ENST00000509535	CHD4	Q14839	1912 aa		13.07	□□□□□ -0.32
RACK1-222	ENST00000509535	FAM83G	A6ND36	823 aa		13.07	□□□□□ -0.32
RACK1-222	ENST00000509535	DCAF8L1	A6NGE4	600 aa		13.06	□□□□□ -0.32
RACK1-222	ENST00000509535	WAPL	Q7Z5K2	1190 aa		13.06	□□□□□ -0.32
RACK1-222	ENST00000509535	CAMKK2	Q96RR4	588 aa		13.06	□□□□□ -0.32
RACK1-222	ENST00000509535	LMOD2	Q6P5Q4	547 aa		13.05	□□□□□ -0.32
RACK1-222	ENST00000509535	TECPR2	O15040	1411 aa		13.05	□□□□□ -0.32
RACK1-222	ENST00000509535	PSME1	Q06323	249 aa		13.04	□□□□□ -0.32
RACK1-222	ENST00000509535	BTG4	Q9NY30	223 aa		13.04	□□□□□ -0.32
RACK1-222	ENST00000509535	STK26	Q9P289	416 aa		13.04	□□□□□ -0.32
RACK1-222	ENST00000509535	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.04	□□□□□ -0.32
RACK1-222	ENST00000509535	RPGRIP1L	Q68CZ1	1315 aa		13.04	□□□□□ -0.32
RACK1-222	ENST00000509535	ARHGEF10	O15013	1369 aa		13.04	□□□□□ -0.32
RACK1-222	ENST00000509535	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.03	□□□□□ -0.32
RACK1-222	ENST00000509535	TRIM37	O94972	964 aa		13.03	□□□□□ -0.32
RACK1-222	ENST00000509535	IFFO2	Q5TF58	517 aa		13.03	□□□□□ -0.32
RACK1-222	ENST00000509535	SBNO1	A3KN83	1393 aa		13.03	□□□□□ -0.32
RACK1-222	ENST00000509535	PARD3	Q8TEW0	1356 aa		13.03	□□□□□ -0.32
RACK1-222	ENST00000509535	PLEKHH1	Q9ULM0	1364 aa		13.03	□□□□□ -0.32
RACK1-222	ENST00000509535	NINL	Q9Y2I6	1382 aa		13.03	□□□□□ -0.32
RACK1-222	ENST00000509535	ALS2	Q96Q42	1657 aa		13.02	□□□□□ -0.32
RACK1-222	ENST00000509535	CRYBG1	Q9Y4K1	1723 aa		13.02	□□□□□ -0.32
RACK1-222	ENST00000509535	ITGAE	P38570	1179 aa		13.02	□□□□□ -0.33
RACK1-222	ENST00000509535	PHF8	Q9UPP1	1060 aa		13.02	□□□□□ -0.33
RACK1-222	ENST00000509535	NRXN1	Q9ULB1	1477 aa		13.02	□□□□□ -0.33
RACK1-222	ENST00000509535	APBA3	O96018	575 aa		13.01	□□□□□ -0.33
RACK1-222	ENST00000509535	SPON1	Q9HCB6	807 aa		13.01	□□□□□ -0.33
RACK1-222	ENST00000509535	SPATA31A5	Q5VU36	1347 aa		13.01	□□□□□ -0.33
RACK1-222	ENST00000509535	SPATA31A7	Q8IWB4	1347 aa		13.01	□□□□□ -0.33
RACK1-222	ENST00000509535	UTRN	P46939	3433 aa		13.01	□□□□□ -0.33
RACK1-222	ENST00000509535	SENP3-EIF4A1	A0A087X0R7	540 aa		13	□□□□□ -0.33
RACK1-222	ENST00000509535	FAM196A	Q6ZSG2	479 aa		12.99	□□□□□ -0.33
RACK1-222	ENST00000509535	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.99	□□□□□ -0.33

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