RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 ORAI2Q96SN7 254 aa22.91■■□□□ 1.26
SMAD5-205ENST00000509297 CDK12Q9NYV4 1490 aaPredicted RBP22.9■■□□□ 1.26
SMAD5-205ENST00000509297 AFF2P51816 1311 aa22.88■■□□□ 1.25
SMAD5-205ENST00000509297 RXRBP28702 533 aa22.88■■□□□ 1.25
SMAD5-205ENST00000509297 KNDC1Q76NI1 1749 aa22.86■■□□□ 1.25
SMAD5-205ENST00000509297 SIRT1Q96EB6 747 aa22.86■■□□□ 1.25
SMAD5-205ENST00000509297 NRXN1Q9ULB1 1477 aa22.85■■□□□ 1.25
SMAD5-205ENST00000509297 NPHP3Q7Z494 1330 aa22.84■■□□□ 1.25
SMAD5-205ENST00000509297 C14orf93Q9H972 538 aaKnown RBP22.84■■□□□ 1.25
SMAD5-205ENST00000509297 STK26Q9P289 416 aa22.84■■□□□ 1.25
SMAD5-205ENST00000509297 MYOM2P54296 1465 aa22.84■■□□□ 1.25
SMAD5-205ENST00000509297 YTHDC2Q9H6S0 1430 aaKnown RBP22.83■■□□□ 1.25
SMAD5-205ENST00000509297 C8orf37Q96NL8 207 aa22.83■■□□□ 1.25
SMAD5-205ENST00000509297 RAB3GAP2Q9H2M9 1393 aa22.82■■□□□ 1.24
SMAD5-205ENST00000509297 ESCO1Q5FWF5 840 aa22.82■■□□□ 1.24
SMAD5-205ENST00000509297 TMEM132EQ6IEE7 984 aa22.82■■□□□ 1.24
SMAD5-205ENST00000509297 WAPLQ7Z5K2 1190 aa22.82■■□□□ 1.24
SMAD5-205ENST00000509297 COL22A1Q8NFW1 1626 aaPredicted RBP22.82■■□□□ 1.24
SMAD5-205ENST00000509297 PXDNQ92626 1479 aa22.8■■□□□ 1.24
SMAD5-205ENST00000509297 PLEKHH1Q9ULM0 1364 aa22.79■■□□□ 1.24
SMAD5-205ENST00000509297 RBM6P78332 1123 aaKnown RBP22.79■■□□□ 1.24
SMAD5-205ENST00000509297 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
SMAD5-205ENST00000509297 QTRT2Q9H974 415 aaKnown RBP22.78■■□□□ 1.24
SMAD5-205ENST00000509297 ADAMTS2O95450 1211 aa22.77■■□□□ 1.24
SMAD5-205ENST00000509297 UPF1Q92900 1129 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMAD5-205ENST00000509297 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
SMAD5-205ENST00000509297 FNBP4Q8N3X1 1017 aaPredicted RBP22.76■■□□□ 1.23
SMAD5-205ENST00000509297 FMN2Q9NZ56 1722 aa22.75■■□□□ 1.23
SMAD5-205ENST00000509297 FOXO3O43524 673 aa22.75■■□□□ 1.23
SMAD5-205ENST00000509297 HRCP23327 699 aa22.75■■□□□ 1.23
SMAD5-205ENST00000509297 CFAP70Q5T0N1 1121 aa22.74■■□□□ 1.23
SMAD5-205ENST00000509297 KIF1AQ12756 1690 aa22.72■■□□□ 1.23
SMAD5-205ENST00000509297 RGS12O14924 1447 aa22.72■■□□□ 1.23
SMAD5-205ENST00000509297 USP21Q9UK80 565 aa22.71■■□□□ 1.23
SMAD5-205ENST00000509297 DLC1Q96QB1 1528 aa22.71■■□□□ 1.23
SMAD5-205ENST00000509297 NUTM2FA1L443 756 aa22.7■■□□□ 1.22
SMAD5-205ENST00000509297 STAC3Q96MF2 364 aa22.7■■□□□ 1.22
SMAD5-205ENST00000509297 TRPC5Q9UL62 973 aaPredicted RBP22.7■■□□□ 1.22
SMAD5-205ENST00000509297 ADGRB1O14514 1584 aa22.67■■□□□ 1.22
SMAD5-205ENST00000509297 ATRNO75882 1429 aa22.67■■□□□ 1.22
SMAD5-205ENST00000509297 SPATA31A3Q5VYP0 1347 aa22.67■■□□□ 1.22
SMAD5-205ENST00000509297 XPCQ01831 940 aaPredicted RBP22.67■■□□□ 1.22
SMAD5-205ENST00000509297 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
SMAD5-205ENST00000509297 PHF8Q9UPP1 1060 aa22.65■■□□□ 1.22
SMAD5-205ENST00000509297 BCL9LQ86UU0 1499 aa22.65■■□□□ 1.22
SMAD5-205ENST00000509297 KRT28Q7Z3Y7 464 aa22.64■■□□□ 1.21
SMAD5-205ENST00000509297 MARF1Q9Y4F3 1742 aaKnown RBP22.64■■□□□ 1.21
SMAD5-205ENST00000509297 ANKARQ7Z5J8 1434 aa22.64■■□□□ 1.21
SMAD5-205ENST00000509297 ADGRB2O60241 1585 aa22.63■■□□□ 1.21
SMAD5-205ENST00000509297 POGKQ9P215 609 aa22.62■■□□□ 1.21
SMAD5-205ENST00000509297 PSME1Q06323 249 aa22.61■■□□□ 1.21
SMAD5-205ENST00000509297 SBNO1A3KN83 1393 aa22.61■■□□□ 1.21
SMAD5-205ENST00000509297 TNS3Q68CZ2 1445 aa22.6■■□□□ 1.21
SMAD5-205ENST00000509297 DCAF11Q8TEB1 546 aa22.59■■□□□ 1.21
SMAD5-205ENST00000509297 ATAD2Q6PL18 1390 aa22.59■■□□□ 1.21
SMAD5-205ENST00000509297 SAFB2Q14151 953 aaKnown RBP eCLIP22.58■■□□□ 1.21
SMAD5-205ENST00000509297 EIF3AQ14152 1382 aaKnown RBP22.58■■□□□ 1.21
SMAD5-205ENST00000509297 RGPD8O14715 1765 aaPredicted RBP22.58■■□□□ 1.2
SMAD5-205ENST00000509297 SLIT2O94813 1529 aa22.57■■□□□ 1.2
SMAD5-205ENST00000509297 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.57■■□□□ 1.2
SMAD5-205ENST00000509297 ARHGEF10O15013 1369 aa22.56■■□□□ 1.2
SMAD5-205ENST00000509297 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
SMAD5-205ENST00000509297 USP32Q8NFA0 1604 aa22.56■■□□□ 1.2
SMAD5-205ENST00000509297 UNC5CLQ8IV45 518 aa22.55■■□□□ 1.2
SMAD5-205ENST00000509297 GJD4Q96KN9 370 aaPredicted RBP22.55■■□□□ 1.2
SMAD5-205ENST00000509297 KDM2AQ9Y2K7 1162 aa22.55■■□□□ 1.2
SMAD5-205ENST00000509297 EP400Q96L91 3159 aa22.52■■□□□ 1.2
SMAD5-205ENST00000509297 TULP4Q9NRJ4 1543 aa22.52■■□□□ 1.19
SMAD5-205ENST00000509297 WASLO00401 505 aaPredicted RBP22.51■■□□□ 1.19
SMAD5-205ENST00000509297 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
SMAD5-205ENST00000509297 HIRIP3Q9BW71 556 aaPredicted RBP22.49■■□□□ 1.19
SMAD5-205ENST00000509297 MINK1Q8N4C8 1332 aaPredicted RBP22.49■■□□□ 1.19
SMAD5-205ENST00000509297 PRR36Q9H6K5 1346 aa22.49■■□□□ 1.19
SMAD5-205ENST00000509297 RALGAPBQ86X10 1494 aa22.48■■□□□ 1.19
SMAD5-205ENST00000509297 HAP1P54257 671 aaPredicted RBP22.48■■□□□ 1.19
SMAD5-205ENST00000509297 GPRASP1Q5JY77 1395 aa22.48■■□□□ 1.19
SMAD5-205ENST00000509297 CCDC125Q86Z20 511 aa22.47■■□□□ 1.19
SMAD5-205ENST00000509297 CABLES1Q8TDN4 633 aa22.47■■□□□ 1.19
SMAD5-205ENST00000509297 GLI3P10071 1580 aa22.46■■□□□ 1.19
SMAD5-205ENST00000509297 ABCA3Q99758 1704 aa22.46■■□□□ 1.19
SMAD5-205ENST00000509297 TRPM3Q9HCF6 1732 aaPredicted RBP22.46■■□□□ 1.19
SMAD5-205ENST00000509297 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.19
SMAD5-205ENST00000509297 VPS72Q15906 364 aa22.45■■□□□ 1.18
SMAD5-205ENST00000509297 LMOD2Q6P5Q4 547 aa22.45■■□□□ 1.18
SMAD5-205ENST00000509297 ARHGEF28Q8N1W1 1705 aaKnown RBP22.45■■□□□ 1.18
SMAD5-205ENST00000509297 KIAA1210Q9ULL0 1709 aa22.43■■□□□ 1.18
SMAD5-205ENST00000509297 ALS2Q96Q42 1657 aa22.42■■□□□ 1.18
SMAD5-205ENST00000509297 ONECUT3O60422 494 aaPredicted RBP22.42■■□□□ 1.18
SMAD5-205ENST00000509297 PLCH1Q4KWH8 1693 aa22.42■■□□□ 1.18
SMAD5-205ENST00000509297 ATP7BP35670 1465 aa22.41■■□□□ 1.18
SMAD5-205ENST00000509297 FAM83GA6ND36 823 aa22.4■■□□□ 1.18
SMAD5-205ENST00000509297 NGDNQ8NEJ9 315 aaKnown RBP22.4■■□□□ 1.18
SMAD5-205ENST00000509297 NUDT16Q96DE0 195 aaKnown RBP22.39■■□□□ 1.17
SMAD5-205ENST00000509297 ITSN1Q15811 1721 aa22.38■■□□□ 1.17
SMAD5-205ENST00000509297 SEPT12Q8IYM1 358 aa22.36■■□□□ 1.17
SMAD5-205ENST00000509297 CDK19Q9BWU1 502 aa22.35■■□□□ 1.17
SMAD5-205ENST00000509297 COL14A1Q05707 1796 aaKnown RBP22.35■■□□□ 1.17
SMAD5-205ENST00000509297 SRCAPQ6ZRS2 3230 aa22.35■■□□□ 1.17
SMAD5-205ENST00000509297 BLMP54132 1417 aaPredicted RBP22.34■■□□□ 1.17
SMAD5-205ENST00000509297 PLEKHG5O94827 1062 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms