RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 REPIN1Q9BWE0 567 aaKnown RBP7.69□□□□□ -1.18
XRCC4-204ENST00000509268 NPAS3Q8IXF0 933 aa7.68□□□□□ -1.18
XRCC4-204ENST00000509268 J3QL48 77 aa7.67□□□□□ -1.18
XRCC4-204ENST00000509268 TRIM32Q13049 653 aa7.67□□□□□ -1.18
XRCC4-204ENST00000509268 ZSCAN1Q8NBB4 408 aa7.67□□□□□ -1.18
XRCC4-204ENST00000509268 MRGPRX2Q96LB1 330 aa7.67□□□□□ -1.18
XRCC4-204ENST00000509268 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
XRCC4-204ENST00000509268 GCGRP47871 477 aa7.67□□□□□ -1.18
XRCC4-204ENST00000509268 HIC1Q14526 733 aa7.66□□□□□ -1.18
XRCC4-204ENST00000509268 GRIPAP1Q4V328 841 aa7.66□□□□□ -1.18
XRCC4-204ENST00000509268 HPS1Q92902 700 aa7.66□□□□□ -1.18
XRCC4-204ENST00000509268 PRDM9Q9NQV7 894 aa7.66□□□□□ -1.18
XRCC4-204ENST00000509268 SULF1Q8IWU6 871 aa7.65□□□□□ -1.18
XRCC4-204ENST00000509268 IRF7Q92985 503 aa7.65□□□□□ -1.18
XRCC4-204ENST00000509268 FECHP22830 423 aa7.64□□□□□ -1.19
XRCC4-204ENST00000509268 MMP16P51512 607 aa7.64□□□□□ -1.19
XRCC4-204ENST00000509268 DDX11L8A8MPP1 907 aa7.63□□□□□ -1.19
XRCC4-204ENST00000509268 GMPRP36959 345 aa7.63□□□□□ -1.19
XRCC4-204ENST00000509268 Q3C1V9 767 aa7.63□□□□□ -1.19
XRCC4-204ENST00000509268 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
XRCC4-204ENST00000509268 KCNV2Q8TDN2 545 aa7.62□□□□□ -1.19
XRCC4-204ENST00000509268 WNT7BP56706 349 aa7.61□□□□□ -1.19
XRCC4-204ENST00000509268 RNF19BQ6ZMZ0 732 aa7.61□□□□□ -1.19
XRCC4-204ENST00000509268 RC3H1Q5TC82 1133 aaKnown RBP7.6□□□□□ -1.19
XRCC4-204ENST00000509268 DXOO77932 396 aaKnown RBP7.59□□□□□ -1.2
XRCC4-204ENST00000509268 H3BM21 787 aa7.58□□□□□ -1.2
XRCC4-204ENST00000509268 GNPATO15228 680 aa7.57□□□□□ -1.2
XRCC4-204ENST00000509268 USB1Q9BQ65 265 aaKnown RBP7.57□□□□□ -1.2
XRCC4-204ENST00000509268 SUZ12Q15022 739 aaKnown RBP7.56□□□□□ -1.2
XRCC4-204ENST00000509268 ALDH1A1P00352 501 aa7.55□□□□□ -1.2
XRCC4-204ENST00000509268 SKOR1P84550 965 aa7.55□□□□□ -1.2
XRCC4-204ENST00000509268 CAPN5O15484 640 aaPredicted RBP7.54□□□□□ -1.2
XRCC4-204ENST00000509268 TRIM46Q7Z4K8 759 aa7.54□□□□□ -1.2
XRCC4-204ENST00000509268 P3H3Q8IVL6 736 aa7.54□□□□□ -1.2
XRCC4-204ENST00000509268 CCDC24Q8N4L8 307 aa7.53□□□□□ -1.2
XRCC4-204ENST00000509268 SEMA3EO15041 775 aa7.52□□□□□ -1.21
XRCC4-204ENST00000509268 SMYD5Q6GMV2 418 aa7.52□□□□□ -1.21
XRCC4-204ENST00000509268 SIAH2O43255 324 aa7.51□□□□□ -1.21
XRCC4-204ENST00000509268 WASF2Q9Y6W5 498 aa7.51□□□□□ -1.21
XRCC4-204ENST00000509268 ERBB4Q15303 1308 aa7.51□□□□□ -1.21
XRCC4-204ENST00000509268 BMP1P13497 986 aa7.5□□□□□ -1.21
XRCC4-204ENST00000509268 VEGFBP49765 207 aa7.5□□□□□ -1.21
XRCC4-204ENST00000509268 KCNMA1Q12791 1236 aa7.5□□□□□ -1.21
XRCC4-204ENST00000509268 NLRP7Q8WX94 980 aa7.5□□□□□ -1.21
XRCC4-204ENST00000509268 USP46P62068 366 aa7.49□□□□□ -1.21
XRCC4-204ENST00000509268 KDM4AO75164 1064 aa7.48□□□□□ -1.21
XRCC4-204ENST00000509268 VSIG8P0DPA2 414 aa7.48□□□□□ -1.21
XRCC4-204ENST00000509268 CD46P15529 392 aa7.48□□□□□ -1.21
XRCC4-204ENST00000509268 RBM26Q5T8P6 1007 aaKnown RBP7.48□□□□□ -1.21
XRCC4-204ENST00000509268 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
XRCC4-204ENST00000509268 PHOX2BQ99453 314 aa7.48□□□□□ -1.21
XRCC4-204ENST00000509268 GPR37O15354 613 aa7.46□□□□□ -1.21
XRCC4-204ENST00000509268 JUNDP17535 347 aa7.46□□□□□ -1.21
XRCC4-204ENST00000509268 ZFP42Q96MM3 310 aa7.46□□□□□ -1.21
XRCC4-204ENST00000509268 TESPA1A2RU30 521 aaPredicted RBP7.46□□□□□ -1.22
XRCC4-204ENST00000509268 TSHZ2Q9NRE2 1034 aa7.46□□□□□ -1.22
XRCC4-204ENST00000509268 SCARF1Q14162 830 aa7.43□□□□□ -1.22
XRCC4-204ENST00000509268 KCTD17Q8N5Z5 321 aa7.43□□□□□ -1.22
XRCC4-204ENST00000509268 MPNDQ8N594 471 aa7.42□□□□□ -1.22
XRCC4-204ENST00000509268 PLEKHG3A1L390 1219 aa7.42□□□□□ -1.22
XRCC4-204ENST00000509268 PTCRAQ6ISU1 281 aaPredicted RBP7.42□□□□□ -1.22
XRCC4-204ENST00000509268 MRPL14Q6P1L8 145 aaKnown RBP7.42□□□□□ -1.22
XRCC4-204ENST00000509268 TMEM151AQ8N4L1 468 aa7.42□□□□□ -1.22
XRCC4-204ENST00000509268 NUDT12Q9BQG2 462 aa7.42□□□□□ -1.22
XRCC4-204ENST00000509268 GSK3AP49840 483 aa7.41□□□□□ -1.22
XRCC4-204ENST00000509268 HOXA2O43364 376 aa7.4□□□□□ -1.22
XRCC4-204ENST00000509268 SH3BP2P78314 561 aa7.4□□□□□ -1.22
XRCC4-204ENST00000509268 RETREG3Q86VR2 466 aa7.39□□□□□ -1.23
XRCC4-204ENST00000509268 RNF225M0QZC1 329 aaPredicted RBP7.37□□□□□ -1.23
XRCC4-204ENST00000509268 GDF11O95390 407 aa7.37□□□□□ -1.23
XRCC4-204ENST00000509268 VARSP26640 1264 aaKnown RBP7.37□□□□□ -1.23
XRCC4-204ENST00000509268 HLA-CQ95604 372 aa7.37□□□□□ -1.23
XRCC4-204ENST00000509268 RASSF7Q02833 373 aa7.37□□□□□ -1.23
XRCC4-204ENST00000509268 NNTQ13423 1086 aa7.37□□□□□ -1.23
XRCC4-204ENST00000509268 PURBQ96QR8 312 aaKnown RBP7.37□□□□□ -1.23
XRCC4-204ENST00000509268 CCNYL3P0C7X3 344 aa7.36□□□□□ -1.23
XRCC4-204ENST00000509268 AMER1Q5JTC6 1135 aaPredicted RBP7.36□□□□□ -1.23
XRCC4-204ENST00000509268 ADH1CP00326 375 aa7.35□□□□□ -1.23
XRCC4-204ENST00000509268 MS4A1P11836 297 aa7.34□□□□□ -1.23
XRCC4-204ENST00000509268 TIMP2P16035 220 aa7.34□□□□□ -1.23
XRCC4-204ENST00000509268 WDR4P57081 412 aaKnown RBP7.34□□□□□ -1.23
XRCC4-204ENST00000509268 SYMPKQ92797 1274 aaKnown RBP7.34□□□□□ -1.23
XRCC4-204ENST00000509268 EVA1BQ9NVM1 165 aa7.34□□□□□ -1.23
XRCC4-204ENST00000509268 PTPRNQ16849 979 aa7.33□□□□□ -1.24
XRCC4-204ENST00000509268 GPIHBP1Q8IV16 184 aa7.33□□□□□ -1.24
XRCC4-204ENST00000509268 MAN1A2O60476 641 aa7.33□□□□□ -1.24
XRCC4-204ENST00000509268 PPFIA3O75145 1194 aa7.33□□□□□ -1.24
XRCC4-204ENST00000509268 BAP1Q92560 729 aa7.33□□□□□ -1.24
XRCC4-204ENST00000509268 KLF16Q9BXK1 252 aaPredicted RBP7.33□□□□□ -1.24
XRCC4-204ENST00000509268 UNC93B1Q9H1C4 597 aa7.33□□□□□ -1.24
XRCC4-204ENST00000509268 TLL2Q9Y6L7 1015 aa7.33□□□□□ -1.24
XRCC4-204ENST00000509268 SOBPA7XYQ1 873 aa7.32□□□□□ -1.24
XRCC4-204ENST00000509268 IGHA1P01876 353 aa7.32□□□□□ -1.24
XRCC4-204ENST00000509268 GUCA2AQ02747 115 aa7.32□□□□□ -1.24
XRCC4-204ENST00000509268 MAP2K5Q13163 448 aa7.32□□□□□ -1.24
XRCC4-204ENST00000509268 KCNH2Q12809 1159 aa7.31□□□□□ -1.24
XRCC4-204ENST00000509268 NUTM1Q86Y26 1132 aa7.31□□□□□ -1.24
XRCC4-204ENST00000509268 ZNF511Q8NB15 262 aa7.31□□□□□ -1.24
XRCC4-204ENST00000509268 ADAMTS8Q9UP79 889 aa7.31□□□□□ -1.24
XRCC4-204ENST00000509268 MDM2Q00987 491 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 255.6 ms