RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CDC42BPGQ6DT37 1551 aa16.23■□□□□ 0.19
RNF4-212ENST00000509258 PIK3C2GO75747 1445 aa16.23■□□□□ 0.19
RNF4-212ENST00000509258 RGS12O14924 1447 aa16.22■□□□□ 0.19
RNF4-212ENST00000509258 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
RNF4-212ENST00000509258 ORAI2Q96SN7 254 aa16.21■□□□□ 0.19
RNF4-212ENST00000509258 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.19
RNF4-212ENST00000509258 ADAMTS2O95450 1211 aa16.2■□□□□ 0.18
RNF4-212ENST00000509258 RGPD8O14715 1765 aaPredicted RBP16.2■□□□□ 0.18
RNF4-212ENST00000509258 ANKRD30BQ9BXX2 1392 aa16.19■□□□□ 0.18
RNF4-212ENST00000509258 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
RNF4-212ENST00000509258 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
RNF4-212ENST00000509258 NGLY1Q96IV0 654 aa16.19■□□□□ 0.18
RNF4-212ENST00000509258 QTRT2Q9H974 415 aaKnown RBP16.19■□□□□ 0.18
RNF4-212ENST00000509258 TECPR2O15040 1411 aa16.19■□□□□ 0.18
RNF4-212ENST00000509258 ACIN1Q9UKV3 1341 aaKnown RBP16.19■□□□□ 0.18
RNF4-212ENST00000509258 COL22A1Q8NFW1 1626 aaPredicted RBP16.18■□□□□ 0.18
RNF4-212ENST00000509258 NPHP3Q7Z494 1330 aa16.18■□□□□ 0.18
RNF4-212ENST00000509258 MYOM2P54296 1465 aa16.17■□□□□ 0.18
RNF4-212ENST00000509258 FMN2Q9NZ56 1722 aa16.16■□□□□ 0.18
RNF4-212ENST00000509258 LRPPRCP42704 1394 aaKnown RBP16.16■□□□□ 0.18
RNF4-212ENST00000509258 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
RNF4-212ENST00000509258 STK26Q9P289 416 aa16.16■□□□□ 0.18
RNF4-212ENST00000509258 ESCO1Q5FWF5 840 aa16.15■□□□□ 0.18
RNF4-212ENST00000509258 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
RNF4-212ENST00000509258 USP21Q9UK80 565 aa16.15■□□□□ 0.18
RNF4-212ENST00000509258 PXDNQ92626 1479 aa16.15■□□□□ 0.18
RNF4-212ENST00000509258 TRPC5Q9UL62 973 aaPredicted RBP16.14■□□□□ 0.17
RNF4-212ENST00000509258 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
RNF4-212ENST00000509258 CFAP70Q5T0N1 1121 aa16.13■□□□□ 0.17
RNF4-212ENST00000509258 FNBP4Q8N3X1 1017 aaPredicted RBP16.13■□□□□ 0.17
RNF4-212ENST00000509258 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
RNF4-212ENST00000509258 C14orf93Q9H972 538 aaKnown RBP16.12■□□□□ 0.17
RNF4-212ENST00000509258 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
RNF4-212ENST00000509258 ATRNO75882 1429 aa16.11■□□□□ 0.17
RNF4-212ENST00000509258 FOXO3O43524 673 aa16.1■□□□□ 0.17
RNF4-212ENST00000509258 KIF1AQ12756 1690 aa16.09■□□□□ 0.17
RNF4-212ENST00000509258 USP32Q8NFA0 1604 aa16.08■□□□□ 0.17
RNF4-212ENST00000509258 NUTM2FA1L443 756 aa16.08■□□□□ 0.16
RNF4-212ENST00000509258 XPCQ01831 940 aaPredicted RBP16.08■□□□□ 0.16
RNF4-212ENST00000509258 DHX57Q6P158 1386 aaKnown RBP16.08■□□□□ 0.16
RNF4-212ENST00000509258 BCL9LQ86UU0 1499 aa16.07■□□□□ 0.16
RNF4-212ENST00000509258 MARF1Q9Y4F3 1742 aaKnown RBP16.06■□□□□ 0.16
RNF4-212ENST00000509258 HRCP23327 699 aa16.06■□□□□ 0.16
RNF4-212ENST00000509258 ARHGEF28Q8N1W1 1705 aaKnown RBP16.05■□□□□ 0.16
RNF4-212ENST00000509258 DLC1Q96QB1 1528 aa16.04■□□□□ 0.16
RNF4-212ENST00000509258 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
RNF4-212ENST00000509258 KDM2AQ9Y2K7 1162 aa16.04■□□□□ 0.16
RNF4-212ENST00000509258 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.04■□□□□ 0.16
RNF4-212ENST00000509258 SPATA31A3Q5VYP0 1347 aa16.03■□□□□ 0.16
RNF4-212ENST00000509258 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
RNF4-212ENST00000509258 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
RNF4-212ENST00000509258 DCAF11Q8TEB1 546 aa16.02■□□□□ 0.16
RNF4-212ENST00000509258 EP400Q96L91 3159 aa16.02■□□□□ 0.15
RNF4-212ENST00000509258 TNS3Q68CZ2 1445 aa16.02■□□□□ 0.15
RNF4-212ENST00000509258 SLIT2O94813 1529 aa16.01■□□□□ 0.15
RNF4-212ENST00000509258 GJD4Q96KN9 370 aaPredicted RBP16.01■□□□□ 0.15
RNF4-212ENST00000509258 PRAM1Q96QH2 718 aa16.01■□□□□ 0.15
RNF4-212ENST00000509258 SRCAPQ6ZRS2 3230 aa16■□□□□ 0.15
RNF4-212ENST00000509258 ABCA3Q99758 1704 aa15.99■□□□□ 0.15
RNF4-212ENST00000509258 KRT28Q7Z3Y7 464 aa15.99■□□□□ 0.15
RNF4-212ENST00000509258 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
RNF4-212ENST00000509258 PHF8Q9UPP1 1060 aa15.99■□□□□ 0.15
RNF4-212ENST00000509258 RALGAPBQ86X10 1494 aa15.98■□□□□ 0.15
RNF4-212ENST00000509258 PSME1Q06323 249 aa15.98■□□□□ 0.15
RNF4-212ENST00000509258 CCDC125Q86Z20 511 aa15.98■□□□□ 0.15
RNF4-212ENST00000509258 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
RNF4-212ENST00000509258 TRAK1Q9UPV9 953 aa15.98■□□□□ 0.15
RNF4-212ENST00000509258 SBNO1A3KN83 1393 aa15.98■□□□□ 0.15
RNF4-212ENST00000509258 TRPM3Q9HCF6 1732 aaPredicted RBP15.97■□□□□ 0.15
RNF4-212ENST00000509258 GLI3P10071 1580 aa15.97■□□□□ 0.15
RNF4-212ENST00000509258 ANKARQ7Z5J8 1434 aa15.97■□□□□ 0.15
RNF4-212ENST00000509258 HAP1P54257 671 aaPredicted RBP15.97■□□□□ 0.15
RNF4-212ENST00000509258 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
RNF4-212ENST00000509258 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
RNF4-212ENST00000509258 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
RNF4-212ENST00000509258 POGKQ9P215 609 aa15.94■□□□□ 0.14
RNF4-212ENST00000509258 ZRANB1Q9UGI0 708 aa15.94■□□□□ 0.14
RNF4-212ENST00000509258 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
RNF4-212ENST00000509258 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
RNF4-212ENST00000509258 NWD2Q9ULI1 1742 aa15.93■□□□□ 0.14
RNF4-212ENST00000509258 BLMP54132 1417 aaPredicted RBP15.93■□□□□ 0.14
RNF4-212ENST00000509258 PLCH1Q4KWH8 1693 aa15.92■□□□□ 0.14
RNF4-212ENST00000509258 ALS2Q96Q42 1657 aa15.92■□□□□ 0.14
RNF4-212ENST00000509258 LMOD2Q6P5Q4 547 aa15.92■□□□□ 0.14
RNF4-212ENST00000509258 CABLES1Q8TDN4 633 aa15.92■□□□□ 0.14
RNF4-212ENST00000509258 CRYBG1Q9Y4K1 1723 aa15.91■□□□□ 0.14
RNF4-212ENST00000509258 TULP4Q9NRJ4 1543 aa15.91■□□□□ 0.14
RNF4-212ENST00000509258 VPS72Q15906 364 aa15.91■□□□□ 0.14
RNF4-212ENST00000509258 TOPAZ1Q8N9V7 1692 aa15.91■□□□□ 0.14
RNF4-212ENST00000509258 NBPF1Q3BBV0 1214 aa15.9■□□□□ 0.14
RNF4-212ENST00000509258 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
RNF4-212ENST00000509258 ITSN1Q15811 1721 aa15.9■□□□□ 0.14
RNF4-212ENST00000509258 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
RNF4-212ENST00000509258 PLEKHG5O94827 1062 aa15.89■□□□□ 0.13
RNF4-212ENST00000509258 SIN3AQ96ST3 1273 aa15.89■□□□□ 0.13
RNF4-212ENST00000509258 ATP7BP35670 1465 aa15.89■□□□□ 0.13
RNF4-212ENST00000509258 TRPM1Q7Z4N2 1603 aa15.88■□□□□ 0.13
RNF4-212ENST00000509258 SEPT12Q8IYM1 358 aa15.88■□□□□ 0.13
RNF4-212ENST00000509258 STAC3Q96MF2 364 aa15.88■□□□□ 0.13
RNF4-212ENST00000509258 CCDC9Q9Y3X0 531 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms