RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 COL17A1Q9UMD9 1497 aaPredicted RBP18.17■□□□□ 0.5
ATP2C1-214ENST00000508532 ATF7IPQ6VMQ6 1270 aa18.17■□□□□ 0.5
ATP2C1-214ENST00000508532 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
ATP2C1-214ENST00000508532 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
ATP2C1-214ENST00000508532 CABP2Q9NPB3 220 aa18.17■□□□□ 0.5
ATP2C1-214ENST00000508532 RBM10P98175 930 aaKnown RBP18.16■□□□□ 0.5
ATP2C1-214ENST00000508532 CAVIN1Q6NZI2 390 aaKnown RBP18.16■□□□□ 0.5
ATP2C1-214ENST00000508532 STAC3Q96MF2 364 aa18.16■□□□□ 0.5
ATP2C1-214ENST00000508532 R3HCC1Q9Y3T6 440 aaKnown RBP18.16■□□□□ 0.5
ATP2C1-214ENST00000508532 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
ATP2C1-214ENST00000508532 KIF21AQ7Z4S6 1674 aa18.15■□□□□ 0.5
ATP2C1-214ENST00000508532 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.5
ATP2C1-214ENST00000508532 TNPO1Q92973 898 aaKnown RBP18.14■□□□□ 0.5
ATP2C1-214ENST00000508532 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
ATP2C1-214ENST00000508532 HDGFL2Q7Z4V5 671 aaPredicted RBP18.14■□□□□ 0.49
ATP2C1-214ENST00000508532 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
ATP2C1-214ENST00000508532 SOX12O15370 315 aa18.14■□□□□ 0.49
ATP2C1-214ENST00000508532 EVC2Q86UK5 1308 aa18.14■□□□□ 0.49
ATP2C1-214ENST00000508532 GRIN2AQ12879 1464 aa18.13■□□□□ 0.49
ATP2C1-214ENST00000508532 KIAA1211Q6ZU35 1233 aa18.13■□□□□ 0.49
ATP2C1-214ENST00000508532 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
ATP2C1-214ENST00000508532 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
ATP2C1-214ENST00000508532 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
ATP2C1-214ENST00000508532 RRP9O43818 475 aaKnown RBP18.12■□□□□ 0.49
ATP2C1-214ENST00000508532 CLCN1P35523 988 aa18.12■□□□□ 0.49
ATP2C1-214ENST00000508532 ST18O60284 1047 aa18.12■□□□□ 0.49
ATP2C1-214ENST00000508532 TRIM27P14373 513 aa18.12■□□□□ 0.49
ATP2C1-214ENST00000508532 DIAPH1O60610 1272 aaKnown RBP18.12■□□□□ 0.49
ATP2C1-214ENST00000508532 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
ATP2C1-214ENST00000508532 MINK1Q8N4C8 1332 aaPredicted RBP18.11■□□□□ 0.49
ATP2C1-214ENST00000508532 ABCA5Q8WWZ7 1642 aa18.11■□□□□ 0.49
ATP2C1-214ENST00000508532 CHD1LQ86WJ1 897 aa18.11■□□□□ 0.49
ATP2C1-214ENST00000508532 RNF214Q8ND24 703 aa18.11■□□□□ 0.49
ATP2C1-214ENST00000508532 HMOX1P09601 288 aa18.11■□□□□ 0.49
ATP2C1-214ENST00000508532 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
ATP2C1-214ENST00000508532 A2MP01023 1474 aa18.1■□□□□ 0.49
ATP2C1-214ENST00000508532 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
ATP2C1-214ENST00000508532 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
ATP2C1-214ENST00000508532 K7ELQ4 463 aaPredicted RBP18.09■□□□□ 0.49
ATP2C1-214ENST00000508532 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
ATP2C1-214ENST00000508532 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.09■□□□□ 0.49
ATP2C1-214ENST00000508532 ASXL1Q8IXJ9 1541 aa18.08■□□□□ 0.49
ATP2C1-214ENST00000508532 DISP1Q96F81 1524 aa18.08■□□□□ 0.48
ATP2C1-214ENST00000508532 CFAP44Q96MT7 982 aa18.08■□□□□ 0.48
ATP2C1-214ENST00000508532 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
ATP2C1-214ENST00000508532 SSFA2P28290 1259 aa18.08■□□□□ 0.48
ATP2C1-214ENST00000508532 CCDC173Q0VFZ6 552 aa18.08■□□□□ 0.48
ATP2C1-214ENST00000508532 SCAPERQ9BY12 1400 aa18.07■□□□□ 0.48
ATP2C1-214ENST00000508532 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
ATP2C1-214ENST00000508532 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
ATP2C1-214ENST00000508532 KIAA0556O60303 1618 aa18.07■□□□□ 0.48
ATP2C1-214ENST00000508532 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
ATP2C1-214ENST00000508532 CDC45O75419 566 aa18.07■□□□□ 0.48
ATP2C1-214ENST00000508532 ZMYND15Q9H091 742 aa18.07■□□□□ 0.48
ATP2C1-214ENST00000508532 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
ATP2C1-214ENST00000508532 KIAA2012Q0VF49 1180 aa18.06■□□□□ 0.48
ATP2C1-214ENST00000508532 TPM2P07951 284 aa18.06■□□□□ 0.48
ATP2C1-214ENST00000508532 NUCB2P80303 420 aa18.06■□□□□ 0.48
ATP2C1-214ENST00000508532 LRRIQ1Q96JM4 1722 aa18.06■□□□□ 0.48
ATP2C1-214ENST00000508532 ATP10BO94823 1461 aa18.06■□□□□ 0.48
ATP2C1-214ENST00000508532 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
ATP2C1-214ENST00000508532 MCCP23508 829 aa18.06■□□□□ 0.48
ATP2C1-214ENST00000508532 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
ATP2C1-214ENST00000508532 CIZ1Q9ULV3 898 aaPredicted RBP18.05■□□□□ 0.48
ATP2C1-214ENST00000508532 USP19O94966 1318 aa18.05■□□□□ 0.48
ATP2C1-214ENST00000508532 MPNDQ8N594 471 aa18.05■□□□□ 0.48
ATP2C1-214ENST00000508532 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
ATP2C1-214ENST00000508532 PIK3C2GO75747 1445 aa18.04■□□□□ 0.48
ATP2C1-214ENST00000508532 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
ATP2C1-214ENST00000508532 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
ATP2C1-214ENST00000508532 INSRP06213 1382 aa18.03■□□□□ 0.48
ATP2C1-214ENST00000508532 PRKAR2BP31323 418 aa18.03■□□□□ 0.48
ATP2C1-214ENST00000508532 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
ATP2C1-214ENST00000508532 ADAMTS12P58397 1594 aa18.02■□□□□ 0.48
ATP2C1-214ENST00000508532 ZSCAN30Q86W11 494 aa18.02■□□□□ 0.48
ATP2C1-214ENST00000508532 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
ATP2C1-214ENST00000508532 SYAP1Q96A49 352 aaPredicted RBP18.01■□□□□ 0.47
ATP2C1-214ENST00000508532 ANTXR1Q9H6X2 564 aa18.01■□□□□ 0.47
ATP2C1-214ENST00000508532 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
ATP2C1-214ENST00000508532 VGFO15240 615 aaPredicted RBP18■□□□□ 0.47
ATP2C1-214ENST00000508532 INTS3Q68E01 1043 aaKnown RBP18■□□□□ 0.47
ATP2C1-214ENST00000508532 RILPL2Q969X0 211 aa18■□□□□ 0.47
ATP2C1-214ENST00000508532 GCC1Q96CN9 775 aa18■□□□□ 0.47
ATP2C1-214ENST00000508532 REC8O95072 547 aa17.98■□□□□ 0.47
ATP2C1-214ENST00000508532 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
ATP2C1-214ENST00000508532 RABEP1Q15276 862 aa17.98■□□□□ 0.47
ATP2C1-214ENST00000508532 API5Q9BZZ5 524 aaKnown RBP17.98■□□□□ 0.47
ATP2C1-214ENST00000508532 NUP160Q12769 1436 aa17.98■□□□□ 0.47
ATP2C1-214ENST00000508532 CHAF1AQ13111 956 aaPredicted RBP17.97■□□□□ 0.47
ATP2C1-214ENST00000508532 TBC1D9Q6ZT07 1266 aa17.97■□□□□ 0.47
ATP2C1-214ENST00000508532 XPCQ01831 940 aaPredicted RBP17.97■□□□□ 0.47
ATP2C1-214ENST00000508532 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
ATP2C1-214ENST00000508532 SHANK2Q9UPX8 1470 aa17.97■□□□□ 0.47
ATP2C1-214ENST00000508532 HMMRO75330 724 aa17.97■□□□□ 0.47
ATP2C1-214ENST00000508532 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
ATP2C1-214ENST00000508532 PLEKHG5O94827 1062 aa17.96■□□□□ 0.47
ATP2C1-214ENST00000508532 NEK4P51957 841 aa17.96■□□□□ 0.47
ATP2C1-214ENST00000508532 HAP1P54257 671 aaPredicted RBP17.95■□□□□ 0.46
ATP2C1-214ENST00000508532 GNAI1P63096 354 aa17.95■□□□□ 0.46
ATP2C1-214ENST00000508532 SYCP2Q9BX26 1530 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms