RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	ORAI2	Q96SN7	254 aa		14.19	□□□□□ -0.14
UBE2D3-223	ENST00000508249	ABCA3	Q99758	1704 aa		14.18	□□□□□ -0.14
UBE2D3-223	ENST00000508249	BLM	P54132	1417 aa	Predicted RBP	14.18	□□□□□ -0.14
UBE2D3-223	ENST00000508249	USP32	Q8NFA0	1604 aa		14.18	□□□□□ -0.14
UBE2D3-223	ENST00000508249	RALGAPB	Q86X10	1494 aa		14.18	□□□□□ -0.14
UBE2D3-223	ENST00000508249	KIF1B	O60333	1816 aa		14.18	□□□□□ -0.14
UBE2D3-223	ENST00000508249	PLCH1	Q4KWH8	1693 aa		14.17	□□□□□ -0.14
UBE2D3-223	ENST00000508249	SLIT2	O94813	1529 aa		14.17	□□□□□ -0.14
UBE2D3-223	ENST00000508249	ROCK1	Q13464	1354 aa		14.17	□□□□□ -0.14
UBE2D3-223	ENST00000508249	PPL	O60437	1756 aa		14.15	□□□□□ -0.14
UBE2D3-223	ENST00000508249	CCDC125	Q86Z20	511 aa		14.15	□□□□□ -0.14
UBE2D3-223	ENST00000508249	NWD2	Q9ULI1	1742 aa		14.13	□□□□□ -0.15
UBE2D3-223	ENST00000508249	DEFB132	Q7Z7B7	95 aa		14.13	□□□□□ -0.15
UBE2D3-223	ENST00000508249	NUP155	O75694	1391 aa		14.12	□□□□□ -0.15
UBE2D3-223	ENST00000508249	GJD4	Q96KN9	370 aa	Predicted RBP	14.12	□□□□□ -0.15
UBE2D3-223	ENST00000508249	NRAP	Q86VF7	1730 aa		14.12	□□□□□ -0.15
UBE2D3-223	ENST00000508249	FMN2	Q9NZ56	1722 aa		14.12	□□□□□ -0.15
UBE2D3-223	ENST00000508249	FAM50A	Q14320	339 aa	Known RBP	14.11	□□□□□ -0.15
UBE2D3-223	ENST00000508249	TNS1	Q9HBL0	1735 aa	Known RBP	14.11	□□□□□ -0.15
UBE2D3-223	ENST00000508249	KNDC1	Q76NI1	1749 aa		14.1	□□□□□ -0.15
UBE2D3-223	ENST00000508249	HFM1	A2PYH4	1435 aa		14.09	□□□□□ -0.15
UBE2D3-223	ENST00000508249	FOXD1	Q16676	465 aa		14.09	□□□□□ -0.15
UBE2D3-223	ENST00000508249	KIF1A	Q12756	1690 aa		14.09	□□□□□ -0.15
UBE2D3-223	ENST00000508249	RGPD8	O14715	1765 aa	Predicted RBP	14.08	□□□□□ -0.16
UBE2D3-223	ENST00000508249	RGPD1	P0DJD0	1748 aa		14.07	□□□□□ -0.16
UBE2D3-223	ENST00000508249	IFT172	Q9UG01	1749 aa		14.07	□□□□□ -0.16
UBE2D3-223	ENST00000508249	NPHP3	Q7Z494	1330 aa		14.06	□□□□□ -0.16
UBE2D3-223	ENST00000508249	XPC	Q01831	940 aa	Predicted RBP	14.05	□□□□□ -0.16
UBE2D3-223	ENST00000508249	ZNF326	Q5BKZ1	582 aa	Known RBP	14.05	□□□□□ -0.16
UBE2D3-223	ENST00000508249	NAIP	Q13075	1403 aa		14.05	□□□□□ -0.16
UBE2D3-223	ENST00000508249	UNC5CL	Q8IV45	518 aa		14.04	□□□□□ -0.16
UBE2D3-223	ENST00000508249	TECPR2	O15040	1411 aa		14.04	□□□□□ -0.16
UBE2D3-223	ENST00000508249	CRYBG1	Q9Y4K1	1723 aa		14.04	□□□□□ -0.16
UBE2D3-223	ENST00000508249	HRC	P23327	699 aa		14.03	□□□□□ -0.16
UBE2D3-223	ENST00000508249	THSD7A	Q9UPZ6	1657 aa		14.03	□□□□□ -0.16
UBE2D3-223	ENST00000508249	SPATA31A3	Q5VYP0	1347 aa		14.01	□□□□□ -0.17
UBE2D3-223	ENST00000508249	PSD	A5PKW4	1024 aa	Predicted RBP	14.01	□□□□□ -0.17
UBE2D3-223	ENST00000508249	FOXO3	O43524	673 aa		14.01	□□□□□ -0.17
UBE2D3-223	ENST00000508249	ONECUT3	O60422	494 aa	Predicted RBP	14.01	□□□□□ -0.17
UBE2D3-223	ENST00000508249	SEPT12	Q8IYM1	358 aa		14.01	□□□□□ -0.17
UBE2D3-223	ENST00000508249	TRPM3	Q9HCF6	1732 aa	Predicted RBP	14.01	□□□□□ -0.17
UBE2D3-223	ENST00000508249	RREB1	Q92766	1687 aa		14.01	□□□□□ -0.17
UBE2D3-223	ENST00000508249	ESCO1	Q5FWF5	840 aa		14	□□□□□ -0.17
UBE2D3-223	ENST00000508249	DISP2	A7MBM2	1401 aa		13.99	□□□□□ -0.17
UBE2D3-223	ENST00000508249	PLEKHH1	Q9ULM0	1364 aa		13.99	□□□□□ -0.17
UBE2D3-223	ENST00000508249	CCDC144A	A2RUR9	1427 aa		13.98	□□□□□ -0.17
UBE2D3-223	ENST00000508249	TNS3	Q68CZ2	1445 aa		13.98	□□□□□ -0.17
UBE2D3-223	ENST00000508249	ALS2	Q96Q42	1657 aa		13.98	□□□□□ -0.17
UBE2D3-223	ENST00000508249	VPS72	Q15906	364 aa		13.98	□□□□□ -0.17
UBE2D3-223	ENST00000508249	NUP188	Q5SRE5	1749 aa		13.98	□□□□□ -0.17
UBE2D3-223	ENST00000508249	KRT27	Q7Z3Y8	459 aa		13.95	□□□□□ -0.18
UBE2D3-223	ENST00000508249	COL14A1	Q05707	1796 aa	Known RBP	13.95	□□□□□ -0.18
UBE2D3-223	ENST00000508249	LRPPRC	P42704	1394 aa	Known RBP	13.95	□□□□□ -0.18
UBE2D3-223	ENST00000508249	NRXN1	Q9ULB1	1477 aa		13.94	□□□□□ -0.18
UBE2D3-223	ENST00000508249	RRBP1	Q9P2E9	1410 aa	Known RBP	13.94	□□□□□ -0.18
UBE2D3-223	ENST00000508249	UTRN	P46939	3433 aa		13.93	□□□□□ -0.18
UBE2D3-223	ENST00000508249	ADGRB2	O60241	1585 aa		13.93	□□□□□ -0.18
UBE2D3-223	ENST00000508249	NUTM2F	A1L443	756 aa		13.93	□□□□□ -0.18
UBE2D3-223	ENST00000508249	VGF	O15240	615 aa	Predicted RBP	13.93	□□□□□ -0.18
UBE2D3-223	ENST00000508249	SF3B2	Q13435	895 aa	Known RBP	13.92	□□□□□ -0.18
UBE2D3-223	ENST00000508249	WAPL	Q7Z5K2	1190 aa		13.92	□□□□□ -0.18
UBE2D3-223	ENST00000508249	CABLES1	Q8TDN4	633 aa		13.92	□□□□□ -0.18
UBE2D3-223	ENST00000508249	PIK3C2G	O75747	1445 aa		13.91	□□□□□ -0.18
UBE2D3-223	ENST00000508249	BAG6	P46379	1132 aa		13.91	□□□□□ -0.18
UBE2D3-223	ENST00000508249	CAMTA1	Q9Y6Y1	1673 aa		13.91	□□□□□ -0.18
UBE2D3-223	ENST00000508249	RPGRIP1L	Q68CZ1	1315 aa		13.9	□□□□□ -0.18
UBE2D3-223	ENST00000508249	ADGRF5	Q8IZF2	1346 aa		13.9	□□□□□ -0.18
UBE2D3-223	ENST00000508249	SPATA31E1	Q6ZUB1	1445 aa		13.9	□□□□□ -0.18
UBE2D3-223	ENST00000508249	EN1	Q05925	392 aa	Predicted RBP	13.9	□□□□□ -0.18
UBE2D3-223	ENST00000508249	R3HDM1	Q15032	1099 aa	Known RBP	13.9	□□□□□ -0.18
UBE2D3-223	ENST00000508249	SBNO1	A3KN83	1393 aa		13.9	□□□□□ -0.18
UBE2D3-223	ENST00000508249	ABCC11	Q96J66	1382 aa		13.9	□□□□□ -0.18
UBE2D3-223	ENST00000508249	FAM83G	A6ND36	823 aa		13.88	□□□□□ -0.19
UBE2D3-223	ENST00000508249	FAM182B	Q5T319	152 aa		13.88	□□□□□ -0.19
UBE2D3-223	ENST00000508249	KRT28	Q7Z3Y7	464 aa		13.88	□□□□□ -0.19
UBE2D3-223	ENST00000508249	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.87	□□□□□ -0.19
UBE2D3-223	ENST00000508249	ITGAE	P38570	1179 aa		13.87	□□□□□ -0.19
UBE2D3-223	ENST00000508249	FAM98C	Q17RN3	349 aa	Known RBP	13.87	□□□□□ -0.19
UBE2D3-223	ENST00000508249	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.87	□□□□□ -0.19
UBE2D3-223	ENST00000508249	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.86	□□□□□ -0.19
UBE2D3-223	ENST00000508249	ARHGEF10	O15013	1369 aa		13.85	□□□□□ -0.19
UBE2D3-223	ENST00000508249	EZH2	Q15910	746 aa	Known RBP	13.85	□□□□□ -0.19
UBE2D3-223	ENST00000508249	CASZ1	Q86V15	1759 aa		13.84	□□□□□ -0.19
UBE2D3-223	ENST00000508249	CAMKK2	Q96RR4	588 aa		13.84	□□□□□ -0.19
UBE2D3-223	ENST00000508249	STK26	Q9P289	416 aa		13.84	□□□□□ -0.19
UBE2D3-223	ENST00000508249	TMEM132E	Q6IEE7	984 aa		13.83	□□□□□ -0.2
UBE2D3-223	ENST00000508249	PHF8	Q9UPP1	1060 aa		13.83	□□□□□ -0.2
UBE2D3-223	ENST00000508249	CCDC9	Q9Y3X0	531 aa	Known RBP	13.83	□□□□□ -0.2
UBE2D3-223	ENST00000508249	SPATA31A5	Q5VU36	1347 aa		13.83	□□□□□ -0.2
UBE2D3-223	ENST00000508249	SPATA31A7	Q8IWB4	1347 aa		13.83	□□□□□ -0.2
UBE2D3-223	ENST00000508249	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE2D3-223	ENST00000508249	RGPD4	Q7Z3J3	1758 aa		13.82	□□□□□ -0.2
UBE2D3-223	ENST00000508249	YY1	P25490	414 aa		13.82	□□□□□ -0.2
UBE2D3-223	ENST00000508249	ANKAR	Q7Z5J8	1434 aa		13.81	□□□□□ -0.2
UBE2D3-223	ENST00000508249	BTG4	Q9NY30	223 aa		13.81	□□□□□ -0.2
UBE2D3-223	ENST00000508249	PEAK1	Q9H792	1746 aa		13.81	□□□□□ -0.2
UBE2D3-223	ENST00000508249	DLC1	Q96QB1	1528 aa		13.8	□□□□□ -0.2
UBE2D3-223	ENST00000508249	PLEKHG5	O94827	1062 aa		13.8	□□□□□ -0.2
UBE2D3-223	ENST00000508249	PARD3	Q8TEW0	1356 aa		13.8	□□□□□ -0.2
UBE2D3-223	ENST00000508249	LMO7	Q8WWI1	1683 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms