RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
SFXN1-208ENST00000507823 ATAD2Q6PL18 1390 aa23.52■■□□□ 1.36
SFXN1-208ENST00000507823 TSHZ2Q9NRE2 1034 aa23.52■■□□□ 1.36
SFXN1-208ENST00000507823 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.52■■□□□ 1.36
SFXN1-208ENST00000507823 TNRQ92752 1358 aa23.51■■□□□ 1.35
SFXN1-208ENST00000507823 ABCC11Q96J66 1382 aa23.51■■□□□ 1.35
SFXN1-208ENST00000507823 CGNL1Q0VF96 1302 aa23.5■■□□□ 1.35
SFXN1-208ENST00000507823 UBR1Q8IWV7 1749 aa23.5■■□□□ 1.35
SFXN1-208ENST00000507823 ZNF521Q96K83 1311 aa23.5■■□□□ 1.35
SFXN1-208ENST00000507823 ESF1Q9H501 851 aaKnown RBP23.5■■□□□ 1.35
SFXN1-208ENST00000507823 STK26Q9P289 416 aa23.5■■□□□ 1.35
SFXN1-208ENST00000507823 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
SFXN1-208ENST00000507823 PRAM1Q96QH2 718 aa23.49■■□□□ 1.35
SFXN1-208ENST00000507823 KNDC1Q76NI1 1749 aa23.49■■□□□ 1.35
SFXN1-208ENST00000507823 SHPRHQ149N8 1683 aa23.49■■□□□ 1.35
SFXN1-208ENST00000507823 CABP2Q9NPB3 220 aa23.48■■□□□ 1.35
SFXN1-208ENST00000507823 CD163L1Q9NR16 1453 aa23.47■■□□□ 1.35
SFXN1-208ENST00000507823 MED14O60244 1454 aa23.46■■□□□ 1.35
SFXN1-208ENST00000507823 PLEKHH1Q9ULM0 1364 aa23.46■■□□□ 1.35
SFXN1-208ENST00000507823 MORC1Q86VD1 984 aa23.46■■□□□ 1.35
SFXN1-208ENST00000507823 TECPR2O15040 1411 aa23.45■■□□□ 1.34
SFXN1-208ENST00000507823 ANKRD26Q9UPS8 1709 aa23.45■■□□□ 1.34
SFXN1-208ENST00000507823 A0A1W2PP64 1363 aa23.45■■□□□ 1.34
SFXN1-208ENST00000507823 NGEFQ8N5V2 710 aa23.45■■□□□ 1.34
SFXN1-208ENST00000507823 POGKQ9P215 609 aa23.45■■□□□ 1.34
SFXN1-208ENST00000507823 CDCA7LQ96GN5 454 aa23.44■■□□□ 1.34
SFXN1-208ENST00000507823 RCAN3Q9UKA8 241 aa23.44■■□□□ 1.34
SFXN1-208ENST00000507823 NLRP1Q9C000 1473 aa23.44■■□□□ 1.34
SFXN1-208ENST00000507823 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
SFXN1-208ENST00000507823 SIRT1Q96EB6 747 aa23.43■■□□□ 1.34
SFXN1-208ENST00000507823 SALL2Q9Y467 1007 aaPredicted RBP23.43■■□□□ 1.34
SFXN1-208ENST00000507823 TMEM2Q9UHN6 1383 aa23.42■■□□□ 1.34
SFXN1-208ENST00000507823 SAFB2Q14151 953 aaKnown RBP eCLIP23.42■■□□□ 1.34
SFXN1-208ENST00000507823 MINK1Q8N4C8 1332 aaPredicted RBP23.42■■□□□ 1.34
SFXN1-208ENST00000507823 RRP1P56182 461 aaKnown RBP23.41■■□□□ 1.34
SFXN1-208ENST00000507823 FAM135BQ49AJ0 1406 aa23.41■■□□□ 1.34
SFXN1-208ENST00000507823 SRPK2P78362 688 aaKnown RBP23.41■■□□□ 1.34
SFXN1-208ENST00000507823 CPS1P31327 1500 aa23.4■■□□□ 1.34
SFXN1-208ENST00000507823 METP08581 1390 aa23.38■■□□□ 1.33
SFXN1-208ENST00000507823 CDK19Q9BWU1 502 aa23.38■■□□□ 1.33
SFXN1-208ENST00000507823 TERF2IPQ9NYB0 399 aa23.38■■□□□ 1.33
SFXN1-208ENST00000507823 ATP7BP35670 1465 aa23.37■■□□□ 1.33
SFXN1-208ENST00000507823 C3P01024 1663 aa23.37■■□□□ 1.33
SFXN1-208ENST00000507823 TRMT2AQ8IZ69 625 aaKnown RBP23.36■■□□□ 1.33
SFXN1-208ENST00000507823 DUSP27Q5VZP5 1158 aa23.35■■□□□ 1.33
SFXN1-208ENST00000507823 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
SFXN1-208ENST00000507823 ADAMTS13Q76LX8 1427 aa23.34■■□□□ 1.33
SFXN1-208ENST00000507823 GOLGA2Q08379 1002 aa23.33■■□□□ 1.33
SFXN1-208ENST00000507823 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
SFXN1-208ENST00000507823 IQSEC2Q5JU85 1478 aa23.33■■□□□ 1.33
SFXN1-208ENST00000507823 PLEKHG1Q9ULL1 1385 aa23.33■■□□□ 1.33
SFXN1-208ENST00000507823 FER1L4A9Z1Z3 1794 aa23.33■■□□□ 1.32
SFXN1-208ENST00000507823 SLIT1O75093 1534 aa23.32■■□□□ 1.32
SFXN1-208ENST00000507823 MTHFSP49914 203 aa23.32■■□□□ 1.32
SFXN1-208ENST00000507823 SLFN5Q08AF3 891 aa23.32■■□□□ 1.32
SFXN1-208ENST00000507823 B4GALNT3Q6L9W6 998 aa23.32■■□□□ 1.32
SFXN1-208ENST00000507823 ARHGAP23Q9P227 1491 aa23.32■■□□□ 1.32
SFXN1-208ENST00000507823 NCBP3Q53F19 620 aaKnown RBP23.31■■□□□ 1.32
SFXN1-208ENST00000507823 WAPLQ7Z5K2 1190 aa23.31■■□□□ 1.32
SFXN1-208ENST00000507823 APAF1O14727 1248 aa23.31■■□□□ 1.32
SFXN1-208ENST00000507823 CCDC146Q8IYE0 955 aa23.3■■□□□ 1.32
SFXN1-208ENST00000507823 CFAP53Q96M91 514 aa23.3■■□□□ 1.32
SFXN1-208ENST00000507823 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
SFXN1-208ENST00000507823 FYB1O15117 783 aa23.29■■□□□ 1.32
SFXN1-208ENST00000507823 HDGFL2Q7Z4V5 671 aaPredicted RBP23.29■■□□□ 1.32
SFXN1-208ENST00000507823 ADGRB2O60241 1585 aa23.29■■□□□ 1.32
SFXN1-208ENST00000507823 CPSF1Q10570 1443 aaKnown RBP23.28■■□□□ 1.32
SFXN1-208ENST00000507823 WASLO00401 505 aaPredicted RBP23.27■■□□□ 1.32
SFXN1-208ENST00000507823 CABP1Q9NZU7 370 aa23.27■■□□□ 1.32
SFXN1-208ENST00000507823 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
SFXN1-208ENST00000507823 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
SFXN1-208ENST00000507823 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
SFXN1-208ENST00000507823 CDC42BPGQ6DT37 1551 aa23.25■■□□□ 1.31
SFXN1-208ENST00000507823 E9PSI1 815 aa23.23■■□□□ 1.31
SFXN1-208ENST00000507823 PNPLA6Q8IY17 1366 aa23.23■■□□□ 1.31
SFXN1-208ENST00000507823 MON2Q7Z3U7 1717 aa23.23■■□□□ 1.31
SFXN1-208ENST00000507823 LTKP29376 864 aa23.23■■□□□ 1.31
SFXN1-208ENST00000507823 GGNBP2Q9H3C7 697 aa23.23■■□□□ 1.31
SFXN1-208ENST00000507823 NKTRP30414 1462 aaKnown RBP23.23■■□□□ 1.31
SFXN1-208ENST00000507823 TXNDC2Q86VQ3 553 aa23.22■■□□□ 1.31
SFXN1-208ENST00000507823 EDC4Q6P2E9 1401 aaKnown RBP23.22■■□□□ 1.31
SFXN1-208ENST00000507823 CCDC27Q2M243 656 aa23.21■■□□□ 1.31
SFXN1-208ENST00000507823 AKAP12Q02952 1782 aa23.21■■□□□ 1.31
SFXN1-208ENST00000507823 CCDC136Q96JN2 1154 aa23.21■■□□□ 1.31
SFXN1-208ENST00000507823 ROBO2Q9HCK4 1378 aa23.2■■□□□ 1.31
SFXN1-208ENST00000507823 CEBPAP49715 358 aaPredicted RBP23.2■■□□□ 1.3
SFXN1-208ENST00000507823 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
SFXN1-208ENST00000507823 DIP2AQ14689 1571 aa23.2■■□□□ 1.3
SFXN1-208ENST00000507823 PPIP5K1Q6PFW1 1433 aa23.2■■□□□ 1.3
SFXN1-208ENST00000507823 SPINK5Q9NQ38 1064 aaPredicted RBP23.2■■□□□ 1.3
SFXN1-208ENST00000507823 EXOC6Q8TAG9 804 aa23.19■■□□□ 1.3
SFXN1-208ENST00000507823 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
SFXN1-208ENST00000507823 TOPAZ1Q8N9V7 1692 aa23.18■■□□□ 1.3
SFXN1-208ENST00000507823 TCP11L2Q8N4U5 519 aa23.16■■□□□ 1.3
SFXN1-208ENST00000507823 RBM19Q9Y4C8 960 aaKnown RBP23.16■■□□□ 1.3
SFXN1-208ENST00000507823 PTPRUQ92729 1446 aa23.16■■□□□ 1.3
SFXN1-208ENST00000507823 NUDT16Q96DE0 195 aaKnown RBP23.15■■□□□ 1.3
SFXN1-208ENST00000507823 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
SFXN1-208ENST00000507823 CCDC61Q9Y6R9 512 aa23.15■■□□□ 1.3
SFXN1-208ENST00000507823 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms