RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 XRN1Q8IZH2 1706 aaKnown RBP24.22■■□□□ 1.47
RNF4-209ENST00000507784 FAM135BQ49AJ0 1406 aa24.22■■□□□ 1.47
RNF4-209ENST00000507784 KCNA6P17658 529 aa24.22■■□□□ 1.47
RNF4-209ENST00000507784 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
RNF4-209ENST00000507784 EVC2Q86UK5 1308 aa24.21■■□□□ 1.47
RNF4-209ENST00000507784 PTCH1Q13635 1447 aa24.17■■□□□ 1.46
RNF4-209ENST00000507784 SRPK2P78362 688 aaKnown RBP24.15■■□□□ 1.46
RNF4-209ENST00000507784 DMRT2Q9Y5R5 561 aa24.15■■□□□ 1.46
RNF4-209ENST00000507784 TULP4Q9NRJ4 1543 aa24.15■■□□□ 1.46
RNF4-209ENST00000507784 CDK19Q9BWU1 502 aa24.14■■□□□ 1.45
RNF4-209ENST00000507784 CABP2Q9NPB3 220 aa24.14■■□□□ 1.45
RNF4-209ENST00000507784 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.13■■□□□ 1.45
RNF4-209ENST00000507784 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
RNF4-209ENST00000507784 PROSER2Q86WR7 435 aaPredicted RBP24.12■■□□□ 1.45
RNF4-209ENST00000507784 RBM33Q96EV2 1170 aaKnown RBP24.11■■□□□ 1.45
RNF4-209ENST00000507784 WASLO00401 505 aaPredicted RBP24.1■■□□□ 1.45
RNF4-209ENST00000507784 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
RNF4-209ENST00000507784 C14orf37Q86TY3 774 aa24.09■■□□□ 1.45
RNF4-209ENST00000507784 PUS7Q96PZ0 661 aaKnown RBP24.08■■□□□ 1.45
RNF4-209ENST00000507784 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.44
RNF4-209ENST00000507784 PANK3Q9H999 370 aa24.05■■□□□ 1.44
RNF4-209ENST00000507784 ADGRB2O60241 1585 aa24.04■■□□□ 1.44
RNF4-209ENST00000507784 NKTRP30414 1462 aaKnown RBP24.04■■□□□ 1.44
RNF4-209ENST00000507784 MYOM1P52179 1685 aa24.04■■□□□ 1.44
RNF4-209ENST00000507784 ZNF335Q9H4Z2 1342 aaPredicted RBP24.03■■□□□ 1.44
RNF4-209ENST00000507784 ATAD2Q6PL18 1390 aa24.03■■□□□ 1.44
RNF4-209ENST00000507784 NUTM2FA1L443 756 aa24.02■■□□□ 1.44
RNF4-209ENST00000507784 SLC12A5Q9H2X9 1139 aa24.02■■□□□ 1.44
RNF4-209ENST00000507784 NALCNQ8IZF0 1738 aa24.01■■□□□ 1.43
RNF4-209ENST00000507784 NUDT16Q96DE0 195 aaKnown RBP24■■□□□ 1.43
RNF4-209ENST00000507784 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
RNF4-209ENST00000507784 TMEM94Q12767 1356 aa23.97■■□□□ 1.43
RNF4-209ENST00000507784 ADGRL3Q9HAR2 1447 aa23.97■■□□□ 1.43
RNF4-209ENST00000507784 ANP32CO43423 234 aa23.96■■□□□ 1.43
RNF4-209ENST00000507784 CABP1Q9NZU7 370 aa23.96■■□□□ 1.43
RNF4-209ENST00000507784 NINLQ9Y2I6 1382 aa23.94■■□□□ 1.42
RNF4-209ENST00000507784 PRR36Q9H6K5 1346 aa23.94■■□□□ 1.42
RNF4-209ENST00000507784 FMN2Q9NZ56 1722 aa23.94■■□□□ 1.42
RNF4-209ENST00000507784 CCDC61Q9Y6R9 512 aa23.94■■□□□ 1.42
RNF4-209ENST00000507784 PPIP5K1Q6PFW1 1433 aa23.93■■□□□ 1.42
RNF4-209ENST00000507784 RGPD8O14715 1765 aaPredicted RBP23.93■■□□□ 1.42
RNF4-209ENST00000507784 MIER1Q8N108 512 aa23.93■■□□□ 1.42
RNF4-209ENST00000507784 CDC42BPGQ6DT37 1551 aa23.93■■□□□ 1.42
RNF4-209ENST00000507784 HDGFL2Q7Z4V5 671 aaPredicted RBP23.92■■□□□ 1.42
RNF4-209ENST00000507784 C19orf44Q9H6X5 657 aa23.92■■□□□ 1.42
RNF4-209ENST00000507784 TERF2IPQ9NYB0 399 aa23.92■■□□□ 1.42
RNF4-209ENST00000507784 KNSTRNQ9Y448 316 aa23.92■■□□□ 1.42
RNF4-209ENST00000507784 ATP7BP35670 1465 aa23.91■■□□□ 1.42
RNF4-209ENST00000507784 NCOA3Q9Y6Q9 1424 aa23.91■■□□□ 1.42
RNF4-209ENST00000507784 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
RNF4-209ENST00000507784 ANKRD36BQ8N2N9 1353 aa23.9■■□□□ 1.42
RNF4-209ENST00000507784 XIRP1Q702N8 1843 aaKnown RBP23.89■■□□□ 1.42
RNF4-209ENST00000507784 USP32Q8NFA0 1604 aa23.89■■□□□ 1.42
RNF4-209ENST00000507784 PER1O15534 1290 aaPredicted RBP23.89■■□□□ 1.41
RNF4-209ENST00000507784 ATF3P18847 181 aa23.89■■□□□ 1.41
RNF4-209ENST00000507784 ITSN1Q15811 1721 aa23.89■■□□□ 1.41
RNF4-209ENST00000507784 CARD14Q9BXL6 1004 aa23.88■■□□□ 1.41
RNF4-209ENST00000507784 ANKARQ7Z5J8 1434 aa23.87■■□□□ 1.41
RNF4-209ENST00000507784 MSH6P52701 1360 aa23.87■■□□□ 1.41
RNF4-209ENST00000507784 TOPAZ1Q8N9V7 1692 aa23.86■■□□□ 1.41
RNF4-209ENST00000507784 NSD3Q9BZ95 1437 aa23.85■■□□□ 1.41
RNF4-209ENST00000507784 CC2D1BQ5T0F9 858 aaKnown RBP23.85■■□□□ 1.41
RNF4-209ENST00000507784 PMFBP1Q8TBY8 1022 aa23.85■■□□□ 1.41
RNF4-209ENST00000507784 A0A1W2PP64 1363 aa23.85■■□□□ 1.41
RNF4-209ENST00000507784 CD163L1Q9NR16 1453 aa23.83■■□□□ 1.41
RNF4-209ENST00000507784 PLEKHG3A1L390 1219 aa23.83■■□□□ 1.41
RNF4-209ENST00000507784 KTN1Q86UP2 1357 aaKnown RBP23.82■■□□□ 1.4
RNF4-209ENST00000507784 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
RNF4-209ENST00000507784 CADPS2Q86UW7 1296 aa23.82■■□□□ 1.4
RNF4-209ENST00000507784 NGDNQ8NEJ9 315 aaKnown RBP23.82■■□□□ 1.4
RNF4-209ENST00000507784 ACEP12821 1306 aa23.82■■□□□ 1.4
RNF4-209ENST00000507784 AKAP12Q02952 1782 aa23.81■■□□□ 1.4
RNF4-209ENST00000507784 ZNF692Q9BU19 519 aaPredicted RBP23.81■■□□□ 1.4
RNF4-209ENST00000507784 PRKRIP1Q9H875 184 aaPredicted RBP23.81■■□□□ 1.4
RNF4-209ENST00000507784 PHF8Q9UPP1 1060 aa23.8■■□□□ 1.4
RNF4-209ENST00000507784 DCCP43146 1447 aa23.79■■□□□ 1.4
RNF4-209ENST00000507784 AMER1Q5JTC6 1135 aaPredicted RBP23.78■■□□□ 1.4
RNF4-209ENST00000507784 CPSF1Q10570 1443 aaKnown RBP23.77■■□□□ 1.4
RNF4-209ENST00000507784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.77■■□□□ 1.4
RNF4-209ENST00000507784 ORAI2Q96SN7 254 aa23.77■■□□□ 1.4
RNF4-209ENST00000507784 CGNL1Q0VF96 1302 aa23.77■■□□□ 1.4
RNF4-209ENST00000507784 LTBP4Q8N2S1 1624 aa23.77■■□□□ 1.4
RNF4-209ENST00000507784 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
RNF4-209ENST00000507784 C1orf167Q5SNV9 1468 aa23.76■■□□□ 1.39
RNF4-209ENST00000507784 RALBP1Q15311 655 aa23.75■■□□□ 1.39
RNF4-209ENST00000507784 MST1RQ04912 1400 aa23.75■■□□□ 1.39
RNF4-209ENST00000507784 EDC4Q6P2E9 1401 aaKnown RBP23.73■■□□□ 1.39
RNF4-209ENST00000507784 POLR3AO14802 1390 aaPredicted RBP23.72■■□□□ 1.39
RNF4-209ENST00000507784 NPC1L1Q9UHC9 1359 aa23.72■■□□□ 1.39
RNF4-209ENST00000507784 KIF20BQ96Q89 1820 aa23.72■■□□□ 1.39
RNF4-209ENST00000507784 PSME1Q06323 249 aa23.71■■□□□ 1.39
RNF4-209ENST00000507784 MORC1Q86VD1 984 aa23.71■■□□□ 1.39
RNF4-209ENST00000507784 USP6P35125 1406 aa23.7■■□□□ 1.38
RNF4-209ENST00000507784 GGNBP2Q9H3C7 697 aa23.7■■□□□ 1.38
RNF4-209ENST00000507784 KIF1AQ12756 1690 aa23.7■■□□□ 1.38
RNF4-209ENST00000507784 PARD3Q8TEW0 1356 aa23.69■■□□□ 1.38
RNF4-209ENST00000507784 TTC21BQ7Z4L5 1316 aa23.69■■□□□ 1.38
RNF4-209ENST00000507784 SLAIN2Q9P270 581 aa23.69■■□□□ 1.38
RNF4-209ENST00000507784 FYB1O15117 783 aa23.68■■□□□ 1.38
RNF4-209ENST00000507784 NSD2O96028 1365 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms