RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
SMARCAD1-205ENST00000506089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
SMARCAD1-205ENST00000506089 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
SMARCAD1-205ENST00000506089 FAM160A2Q8N612 972 aaPredicted RBP8.51□□□□□ -1.05
SMARCAD1-205ENST00000506089 NLRP7Q8WX94 980 aa8.51□□□□□ -1.05
SMARCAD1-205ENST00000506089 THAP11Q96EK4 314 aa8.5□□□□□ -1.05
SMARCAD1-205ENST00000506089 SENP2Q9HC62 589 aa8.5□□□□□ -1.05
SMARCAD1-205ENST00000506089 J3QL48 77 aa8.49□□□□□ -1.05
SMARCAD1-205ENST00000506089 SNIP1Q8TAD8 396 aaKnown RBP8.49□□□□□ -1.05
SMARCAD1-205ENST00000506089 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
SMARCAD1-205ENST00000506089 WNT7AO00755 349 aa8.48□□□□□ -1.05
SMARCAD1-205ENST00000506089 LORP23490 312 aaPredicted RBP8.48□□□□□ -1.05
SMARCAD1-205ENST00000506089 MORN1Q5T089 497 aa8.48□□□□□ -1.05
SMARCAD1-205ENST00000506089 FAM181BA6NEQ2 426 aa8.47□□□□□ -1.05
SMARCAD1-205ENST00000506089 OATP04181 439 aa8.47□□□□□ -1.05
SMARCAD1-205ENST00000506089 MAP2K5Q13163 448 aa8.47□□□□□ -1.05
SMARCAD1-205ENST00000506089 ZBTB24O43167 697 aaPredicted RBP8.46□□□□□ -1.06
SMARCAD1-205ENST00000506089 GMPRP36959 345 aa8.46□□□□□ -1.06
SMARCAD1-205ENST00000506089 FUT2Q10981 343 aa8.46□□□□□ -1.06
SMARCAD1-205ENST00000506089 HPS1Q92902 700 aa8.46□□□□□ -1.06
SMARCAD1-205ENST00000506089 BCANQ96GW7 911 aa8.46□□□□□ -1.06
SMARCAD1-205ENST00000506089 IRF6O14896 467 aa8.45□□□□□ -1.06
SMARCAD1-205ENST00000506089 ZMYND10O75800 440 aa8.45□□□□□ -1.06
SMARCAD1-205ENST00000506089 RSPH4AQ5TD94 716 aa8.45□□□□□ -1.06
SMARCAD1-205ENST00000506089 BARGINQ6ZT62 677 aa8.45□□□□□ -1.06
SMARCAD1-205ENST00000506089 MRGPRX2Q96LB1 330 aa8.45□□□□□ -1.06
SMARCAD1-205ENST00000506089 SLC27A5Q9Y2P5 690 aa8.45□□□□□ -1.06
SMARCAD1-205ENST00000506089 FMNL1O95466 1100 aaPredicted RBP8.44□□□□□ -1.06
SMARCAD1-205ENST00000506089 ZSCAN1Q8NBB4 408 aa8.44□□□□□ -1.06
SMARCAD1-205ENST00000506089 CCDC102AQ96A19 550 aa8.44□□□□□ -1.06
SMARCAD1-205ENST00000506089 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
SMARCAD1-205ENST00000506089 TRIM32Q13049 653 aa8.43□□□□□ -1.06
SMARCAD1-205ENST00000506089 SLC16A10Q8TF71 515 aa8.43□□□□□ -1.06
SMARCAD1-205ENST00000506089 MINK1Q8N4C8 1332 aaPredicted RBP8.43□□□□□ -1.06
SMARCAD1-205ENST00000506089 RDH13Q8NBN7 331 aa8.42□□□□□ -1.06
SMARCAD1-205ENST00000506089 ATP6V1AP38606 617 aa8.41□□□□□ -1.06
SMARCAD1-205ENST00000506089 BRICD5Q6PL45 260 aa8.41□□□□□ -1.06
SMARCAD1-205ENST00000506089 NXF1Q9UBU9 619 aaKnown RBP8.41□□□□□ -1.06
SMARCAD1-205ENST00000506089 VEGFBP49765 207 aa8.39□□□□□ -1.07
SMARCAD1-205ENST00000506089 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
SMARCAD1-205ENST00000506089 RNF19BQ6ZMZ0 732 aa8.39□□□□□ -1.07
SMARCAD1-205ENST00000506089 MSS51Q4VC12 460 aa8.38□□□□□ -1.07
SMARCAD1-205ENST00000506089 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
SMARCAD1-205ENST00000506089 DAXXQ9UER7 740 aaPredicted RBP8.38□□□□□ -1.07
SMARCAD1-205ENST00000506089 SALL2Q9Y467 1007 aaPredicted RBP8.38□□□□□ -1.07
SMARCAD1-205ENST00000506089 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
SMARCAD1-205ENST00000506089 MDM2Q00987 491 aaPredicted RBP8.37□□□□□ -1.07
SMARCAD1-205ENST00000506089 IRF7Q92985 503 aa8.37□□□□□ -1.07
SMARCAD1-205ENST00000506089 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
SMARCAD1-205ENST00000506089 ERBB4Q15303 1308 aa8.36□□□□□ -1.07
SMARCAD1-205ENST00000506089 BMP1P13497 986 aa8.36□□□□□ -1.07
SMARCAD1-205ENST00000506089 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
SMARCAD1-205ENST00000506089 GCGRP47871 477 aa8.34□□□□□ -1.07
SMARCAD1-205ENST00000506089 H3BM21 787 aa8.33□□□□□ -1.08
SMARCAD1-205ENST00000506089 SKOR1P84550 965 aa8.33□□□□□ -1.08
SMARCAD1-205ENST00000506089 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
SMARCAD1-205ENST00000506089 TRIM46Q7Z4K8 759 aa8.33□□□□□ -1.08
SMARCAD1-205ENST00000506089 SLC24A3Q9HC58 644 aa8.33□□□□□ -1.08
SMARCAD1-205ENST00000506089 MMP16P51512 607 aa8.32□□□□□ -1.08
SMARCAD1-205ENST00000506089 NPAS3Q8IXF0 933 aa8.32□□□□□ -1.08
SMARCAD1-205ENST00000506089 TRIM66O15016 1216 aa8.31□□□□□ -1.08
SMARCAD1-205ENST00000506089 ALDH1A1P00352 501 aa8.31□□□□□ -1.08
SMARCAD1-205ENST00000506089 CD46P15529 392 aa8.31□□□□□ -1.08
SMARCAD1-205ENST00000506089 AMHR2Q16671 573 aa8.3□□□□□ -1.08
SMARCAD1-205ENST00000506089 GPCPD1Q9NPB8 672 aa8.3□□□□□ -1.08
SMARCAD1-205ENST00000506089 AK7Q96M32 723 aa8.29□□□□□ -1.08
SMARCAD1-205ENST00000506089 FAM217BQ9NTX9 383 aaPredicted RBP8.29□□□□□ -1.08
SMARCAD1-205ENST00000506089 DXOO77932 396 aaKnown RBP8.28□□□□□ -1.08
SMARCAD1-205ENST00000506089 CLCN1P35523 988 aa8.28□□□□□ -1.08
SMARCAD1-205ENST00000506089 SULF1Q8IWU6 871 aa8.28□□□□□ -1.08
SMARCAD1-205ENST00000506089 WNT7BP56706 349 aa8.27□□□□□ -1.09
SMARCAD1-205ENST00000506089 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
SMARCAD1-205ENST00000506089 CAPN5O15484 640 aaPredicted RBP8.26□□□□□ -1.09
SMARCAD1-205ENST00000506089 Q3C1V9 767 aa8.26□□□□□ -1.09
SMARCAD1-205ENST00000506089 PARP9Q8IXQ6 854 aa8.26□□□□□ -1.09
SMARCAD1-205ENST00000506089 KCTD17Q8N5Z5 321 aa8.26□□□□□ -1.09
SMARCAD1-205ENST00000506089 TTLL12Q14166 644 aaPredicted RBP8.25□□□□□ -1.09
SMARCAD1-205ENST00000506089 GIGYF2Q6Y7W6 1299 aaKnown RBP8.25□□□□□ -1.09
SMARCAD1-205ENST00000506089 SSTR3P32745 418 aaPredicted RBP8.24□□□□□ -1.09
SMARCAD1-205ENST00000506089 PDE4DQ08499 809 aa8.24□□□□□ -1.09
SMARCAD1-205ENST00000506089 GRIPAP1Q4V328 841 aa8.24□□□□□ -1.09
SMARCAD1-205ENST00000506089 USB1Q9BQ65 265 aaKnown RBP8.24□□□□□ -1.09
SMARCAD1-205ENST00000506089 GSK3AP49840 483 aa8.23□□□□□ -1.09
SMARCAD1-205ENST00000506089 HLA-CQ95604 372 aa8.23□□□□□ -1.09
SMARCAD1-205ENST00000506089 SIAH2O43255 324 aa8.22□□□□□ -1.09
SMARCAD1-205ENST00000506089 MS4A1P11836 297 aa8.22□□□□□ -1.09
SMARCAD1-205ENST00000506089 ZFP42Q96MM3 310 aa8.22□□□□□ -1.09
SMARCAD1-205ENST00000506089 KDM4AO75164 1064 aa8.21□□□□□ -1.1
SMARCAD1-205ENST00000506089 KCNMA1Q12791 1236 aa8.21□□□□□ -1.1
SMARCAD1-205ENST00000506089 WASF2Q9Y6W5 498 aa8.21□□□□□ -1.1
SMARCAD1-205ENST00000506089 EHBP1Q8NDI1 1231 aa8.2□□□□□ -1.1
SMARCAD1-205ENST00000506089 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
SMARCAD1-205ENST00000506089 SOBPA7XYQ1 873 aa8.18□□□□□ -1.1
SMARCAD1-205ENST00000506089 VSIG8P0DPA2 414 aa8.18□□□□□ -1.1
SMARCAD1-205ENST00000506089 HOXA2O43364 376 aa8.17□□□□□ -1.1
SMARCAD1-205ENST00000506089 SPIRE2Q8WWL2 714 aa8.17□□□□□ -1.1
SMARCAD1-205ENST00000506089 BEGAINQ9BUH8 593 aa8.17□□□□□ -1.1
SMARCAD1-205ENST00000506089 PTCRAQ6ISU1 281 aaPredicted RBP8.16□□□□□ -1.1
SMARCAD1-205ENST00000506089 GPBP1L1Q9HC44 474 aaPredicted RBP8.16□□□□□ -1.1
SMARCAD1-205ENST00000506089 NDUFV2P19404 249 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms