RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TECPR2O15040 1411 aa36.56■■■■□ 3.44
HERC4-212ENST00000505760 SOS2Q07890 1332 aaPredicted RBP36.56■■■■□ 3.44
HERC4-212ENST00000505760 RXRBP28702 533 aa36.55■■■■□ 3.44
HERC4-212ENST00000505760 TMEM132EQ6IEE7 984 aa36.55■■■■□ 3.44
HERC4-212ENST00000505760 C8orf37Q96NL8 207 aa36.55■■■■□ 3.44
HERC4-212ENST00000505760 WAPLQ7Z5K2 1190 aa36.53■■■■□ 3.44
HERC4-212ENST00000505760 ABCC11Q96J66 1382 aa36.53■■■■□ 3.44
HERC4-212ENST00000505760 KNDC1Q76NI1 1749 aa36.52■■■■□ 3.44
HERC4-212ENST00000505760 ESCO1Q5FWF5 840 aa36.52■■■■□ 3.44
HERC4-212ENST00000505760 RAB3GAP2Q9H2M9 1393 aa36.52■■■■□ 3.44
HERC4-212ENST00000505760 ADAMTS2O95450 1211 aa36.48■■■■□ 3.43
HERC4-212ENST00000505760 YTHDC2Q9H6S0 1430 aaKnown RBP36.48■■■■□ 3.43
HERC4-212ENST00000505760 NPHP3Q7Z494 1330 aa36.46■■■■□ 3.43
HERC4-212ENST00000505760 PLEKHH1Q9ULM0 1364 aa36.45■■■■□ 3.43
HERC4-212ENST00000505760 NUTM2FA1L443 756 aa36.44■■■■□ 3.42
HERC4-212ENST00000505760 NGLY1Q96IV0 654 aa36.44■■■■□ 3.42
HERC4-212ENST00000505760 C14orf93Q9H972 538 aaKnown RBP36.43■■■■□ 3.42
HERC4-212ENST00000505760 MYOM2P54296 1465 aa36.42■■■■□ 3.42
HERC4-212ENST00000505760 CDK12Q9NYV4 1490 aaPredicted RBP36.42■■■■□ 3.42
HERC4-212ENST00000505760 QTRT2Q9H974 415 aaKnown RBP36.41■■■■□ 3.42
HERC4-212ENST00000505760 NRXN1Q9ULB1 1477 aa36.41■■■■□ 3.42
HERC4-212ENST00000505760 FOXO3O43524 673 aa36.39■■■■□ 3.42
HERC4-212ENST00000505760 COL22A1Q8NFW1 1626 aaPredicted RBP36.38■■■■□ 3.41
HERC4-212ENST00000505760 CFAP70Q5T0N1 1121 aa36.38■■■■□ 3.41
HERC4-212ENST00000505760 FMN2Q9NZ56 1722 aa36.38■■■■□ 3.41
HERC4-212ENST00000505760 DHX57Q6P158 1386 aaKnown RBP36.38■■■■□ 3.41
HERC4-212ENST00000505760 PXDNQ92626 1479 aa36.37■■■■□ 3.41
HERC4-212ENST00000505760 XPCQ01831 940 aaPredicted RBP36.36■■■■□ 3.41
HERC4-212ENST00000505760 SIRT1Q96EB6 747 aa36.36■■■■□ 3.41
HERC4-212ENST00000505760 RBM6P78332 1123 aaKnown RBP36.35■■■■□ 3.41
HERC4-212ENST00000505760 UPF1Q92900 1129 aaKnown RBP eCLIP36.33■■■■□ 3.41
HERC4-212ENST00000505760 USP21Q9UK80 565 aa36.3■■■■□ 3.4
HERC4-212ENST00000505760 KIF1AQ12756 1690 aa36.29■■■■□ 3.4
HERC4-212ENST00000505760 RGS12O14924 1447 aa36.27■■■■□ 3.4
HERC4-212ENST00000505760 SAFB2Q14151 953 aaKnown RBP eCLIP36.26■■■■□ 3.4
HERC4-212ENST00000505760 PRAM1Q96QH2 718 aa36.26■■■■□ 3.4
HERC4-212ENST00000505760 RGPD8O14715 1765 aaPredicted RBP36.25■■■■□ 3.39
HERC4-212ENST00000505760 FNBP4Q8N3X1 1017 aaPredicted RBP36.25■■■■□ 3.39
HERC4-212ENST00000505760 MARF1Q9Y4F3 1742 aaKnown RBP36.23■■■■□ 3.39
HERC4-212ENST00000505760 POGKQ9P215 609 aa36.23■■■■□ 3.39
HERC4-212ENST00000505760 TRPC5Q9UL62 973 aaPredicted RBP36.23■■■■□ 3.39
HERC4-212ENST00000505760 KDM2AQ9Y2K7 1162 aa36.21■■■■□ 3.39
HERC4-212ENST00000505760 DLC1Q96QB1 1528 aa36.2■■■■□ 3.39
HERC4-212ENST00000505760 HRCP23327 699 aa36.2■■■■□ 3.39
HERC4-212ENST00000505760 KRT28Q7Z3Y7 464 aa36.19■■■■□ 3.38
HERC4-212ENST00000505760 DCAF11Q8TEB1 546 aa36.19■■■■□ 3.38
HERC4-212ENST00000505760 PHF8Q9UPP1 1060 aa36.19■■■■□ 3.38
HERC4-212ENST00000505760 SPATA31A3Q5VYP0 1347 aa36.18■■■■□ 3.38
HERC4-212ENST00000505760 ADGRB1O14514 1584 aa36.16■■■■□ 3.38
HERC4-212ENST00000505760 ATRNO75882 1429 aa36.15■■■■□ 3.38
HERC4-212ENST00000505760 TRAK1Q9UPV9 953 aa36.14■■■■□ 3.38
HERC4-212ENST00000505760 PSME1Q06323 249 aa36.13■■■■□ 3.37
HERC4-212ENST00000505760 STAC3Q96MF2 364 aa36.12■■■■□ 3.37
HERC4-212ENST00000505760 BCL9LQ86UU0 1499 aa36.11■■■■□ 3.37
HERC4-212ENST00000505760 ADGRB2O60241 1585 aa36.1■■■■□ 3.37
HERC4-212ENST00000505760 TNS3Q68CZ2 1445 aa36.08■■■■□ 3.37
HERC4-212ENST00000505760 ANKARQ7Z5J8 1434 aa36.08■■■■□ 3.37
HERC4-212ENST00000505760 HAP1P54257 671 aaPredicted RBP36.07■■■■□ 3.36
HERC4-212ENST00000505760 HIRIP3Q9BW71 556 aaPredicted RBP36.07■■■■□ 3.36
HERC4-212ENST00000505760 USP32Q8NFA0 1604 aa36.06■■■■□ 3.36
HERC4-212ENST00000505760 ATAD2Q6PL18 1390 aa36.04■■■■□ 3.36
HERC4-212ENST00000505760 LMOD2Q6P5Q4 547 aa36.04■■■■□ 3.36
HERC4-212ENST00000505760 PMFBP1Q8TBY8 1022 aa36.04■■■■□ 3.36
HERC4-212ENST00000505760 MINK1Q8N4C8 1332 aaPredicted RBP36.04■■■■□ 3.36
HERC4-212ENST00000505760 SBNO1A3KN83 1393 aa36.03■■■■□ 3.36
HERC4-212ENST00000505760 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.03■■■■□ 3.36
HERC4-212ENST00000505760 PLEKHG5O94827 1062 aa36.01■■■■□ 3.36
HERC4-212ENST00000505760 EIF3AQ14152 1382 aaKnown RBP36.01■■■■□ 3.35
HERC4-212ENST00000505760 UNC5CLQ8IV45 518 aa36■■■■□ 3.35
HERC4-212ENST00000505760 GJD4Q96KN9 370 aaPredicted RBP36■■■■□ 3.35
HERC4-212ENST00000505760 ARHGEF10O15013 1369 aa36■■■■□ 3.35
HERC4-212ENST00000505760 CABLES1Q8TDN4 633 aa35.99■■■■□ 3.35
HERC4-212ENST00000505760 SLIT2O94813 1529 aa35.98■■■■□ 3.35
HERC4-212ENST00000505760 TULP4Q9NRJ4 1543 aa35.95■■■■□ 3.35
HERC4-212ENST00000505760 WASLO00401 505 aaPredicted RBP35.95■■■■□ 3.35
HERC4-212ENST00000505760 EP400Q96L91 3159 aa35.94■■■■□ 3.34
HERC4-212ENST00000505760 ARHGEF28Q8N1W1 1705 aaKnown RBP35.94■■■■□ 3.34
HERC4-212ENST00000505760 ABCA3Q99758 1704 aa35.94■■■■□ 3.34
HERC4-212ENST00000505760 GPRASP1Q5JY77 1395 aa35.92■■■■□ 3.34
HERC4-212ENST00000505760 PRR36Q9H6K5 1346 aa35.92■■■■□ 3.34
HERC4-212ENST00000505760 RALGAPBQ86X10 1494 aa35.9■■■■□ 3.34
HERC4-212ENST00000505760 TRPM3Q9HCF6 1732 aaPredicted RBP35.89■■■■□ 3.34
HERC4-212ENST00000505760 PLCH1Q4KWH8 1693 aa35.88■■■■□ 3.33
HERC4-212ENST00000505760 GLI3P10071 1580 aa35.88■■■■□ 3.33
HERC4-212ENST00000505760 NWD2Q9ULI1 1742 aa35.87■■■■□ 3.33
HERC4-212ENST00000505760 NGDNQ8NEJ9 315 aaKnown RBP35.86■■■■□ 3.33
HERC4-212ENST00000505760 ALS2Q96Q42 1657 aa35.84■■■■□ 3.33
HERC4-212ENST00000505760 ITSN1Q15811 1721 aa35.83■■■■□ 3.33
HERC4-212ENST00000505760 KIAA1210Q9ULL0 1709 aa35.83■■■■□ 3.33
HERC4-212ENST00000505760 VPS72Q15906 364 aa35.82■■■■□ 3.32
HERC4-212ENST00000505760 CCDC9Q9Y3X0 531 aaKnown RBP35.81■■■■□ 3.32
HERC4-212ENST00000505760 FAM83GA6ND36 823 aa35.8■■■■□ 3.32
HERC4-212ENST00000505760 PAK3O75914 559 aaPredicted RBP35.79■■■■□ 3.32
HERC4-212ENST00000505760 NUDT16Q96DE0 195 aaKnown RBP35.79■■■■□ 3.32
HERC4-212ENST00000505760 ATP7BP35670 1465 aa35.78■■■■□ 3.32
HERC4-212ENST00000505760 CCDC125Q86Z20 511 aa35.77■■■■□ 3.32
HERC4-212ENST00000505760 BRWD3Q6RI45 1802 aa35.76■■■■□ 3.32
HERC4-212ENST00000505760 CDK19Q9BWU1 502 aa35.75■■■■□ 3.31
HERC4-212ENST00000505760 SEPT12Q8IYM1 358 aa35.73■■■■□ 3.31
HERC4-212ENST00000505760 NBPF1Q3BBV0 1214 aa35.72■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms