RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 FAM9BQ8IZU0 186 aa33.53■■■□□ 2.96
DHFR-203ENST00000505337 SENP3Q9H4L4 574 aaPredicted RBP33.53■■■□□ 2.96
DHFR-203ENST00000505337 BCANQ96GW7 911 aa33.49■■■□□ 2.95
DHFR-203ENST00000505337 ALKQ9UM73 1620 aa33.49■■■□□ 2.95
DHFR-203ENST00000505337 TMEM132EQ6IEE7 984 aa33.48■■■□□ 2.95
DHFR-203ENST00000505337 TRAK1Q9UPV9 953 aa33.46■■■□□ 2.95
DHFR-203ENST00000505337 LRPPRCP42704 1394 aaKnown RBP33.45■■■□□ 2.95
DHFR-203ENST00000505337 LRRC7Q96NW7 1537 aa33.45■■■□□ 2.95
DHFR-203ENST00000505337 TULP4Q9NRJ4 1543 aa33.44■■■□□ 2.94
DHFR-203ENST00000505337 ZBED9Q6R2W3 1325 aa33.44■■■□□ 2.94
DHFR-203ENST00000505337 NLRP13Q86W25 1043 aa33.43■■■□□ 2.94
DHFR-203ENST00000505337 PNISRQ8TF01 805 aaKnown RBP33.43■■■□□ 2.94
DHFR-203ENST00000505337 ADAMTS13Q76LX8 1427 aa33.43■■■□□ 2.94
DHFR-203ENST00000505337 NRXN3Q9Y4C0 1643 aa33.42■■■□□ 2.94
DHFR-203ENST00000505337 TMC1Q8TDI8 760 aa33.42■■■□□ 2.94
DHFR-203ENST00000505337 KCNA6P17658 529 aa33.41■■■□□ 2.94
DHFR-203ENST00000505337 TBX22Q9Y458 520 aa33.41■■■□□ 2.94
DHFR-203ENST00000505337 NPC1L1Q9UHC9 1359 aa33.41■■■□□ 2.94
DHFR-203ENST00000505337 CC2D1BQ5T0F9 858 aaKnown RBP33.38■■■□□ 2.93
DHFR-203ENST00000505337 UBAP1LF5GYI3 381 aa33.36■■■□□ 2.93
DHFR-203ENST00000505337 AMER1Q5JTC6 1135 aaPredicted RBP33.36■■■□□ 2.93
DHFR-203ENST00000505337 USP32Q8NFA0 1604 aa33.36■■■□□ 2.93
DHFR-203ENST00000505337 NWD1Q149M9 1564 aa33.35■■■□□ 2.93
DHFR-203ENST00000505337 KNSTRNQ9Y448 316 aa33.35■■■□□ 2.93
DHFR-203ENST00000505337 YTHDC2Q9H6S0 1430 aaKnown RBP33.34■■■□□ 2.93
DHFR-203ENST00000505337 DIP2AQ14689 1571 aa33.34■■■□□ 2.93
DHFR-203ENST00000505337 CHD2O14647 1828 aaKnown RBP33.32■■■□□ 2.92
DHFR-203ENST00000505337 DLC1Q96QB1 1528 aa33.31■■■□□ 2.92
DHFR-203ENST00000505337 XIRP1Q702N8 1843 aaKnown RBP33.31■■■□□ 2.92
DHFR-203ENST00000505337 SUPT16HQ9Y5B9 1047 aaKnown RBP33.29■■■□□ 2.92
DHFR-203ENST00000505337 KNDC1Q76NI1 1749 aa33.29■■■□□ 2.92
DHFR-203ENST00000505337 NKTRP30414 1462 aaKnown RBP33.28■■■□□ 2.92
DHFR-203ENST00000505337 PUS7Q96PZ0 661 aaKnown RBP33.28■■■□□ 2.92
DHFR-203ENST00000505337 TMEM94Q12767 1356 aa33.26■■■□□ 2.92
DHFR-203ENST00000505337 PIK3R4Q99570 1358 aa33.26■■■□□ 2.92
DHFR-203ENST00000505337 PROSER2Q86WR7 435 aaPredicted RBP33.25■■■□□ 2.91
DHFR-203ENST00000505337 INSRP06213 1382 aa33.25■■■□□ 2.91
DHFR-203ENST00000505337 TOM1O60784 492 aa33.25■■■□□ 2.91
DHFR-203ENST00000505337 RBM33Q96EV2 1170 aaKnown RBP33.25■■■□□ 2.91
DHFR-203ENST00000505337 PTPRUQ92729 1446 aa33.24■■■□□ 2.91
DHFR-203ENST00000505337 EVC2Q86UK5 1308 aa33.23■■■□□ 2.91
DHFR-203ENST00000505337 METP08581 1390 aa33.21■■■□□ 2.91
DHFR-203ENST00000505337 CARD14Q9BXL6 1004 aa33.2■■■□□ 2.91
DHFR-203ENST00000505337 AMOTL2Q9Y2J4 779 aa33.19■■■□□ 2.9
DHFR-203ENST00000505337 BLMP54132 1417 aaPredicted RBP33.19■■■□□ 2.9
DHFR-203ENST00000505337 PPP2R1AP30153 589 aa33.17■■■□□ 2.9
DHFR-203ENST00000505337 PIP4K2BP78356 416 aa33.17■■■□□ 2.9
DHFR-203ENST00000505337 STK26Q9P289 416 aa33.16■■■□□ 2.9
DHFR-203ENST00000505337 NSD3Q9BZ95 1437 aa33.16■■■□□ 2.9
DHFR-203ENST00000505337 NINLQ9Y2I6 1382 aa33.13■■■□□ 2.89
DHFR-203ENST00000505337 XRN1Q8IZH2 1706 aaKnown RBP33.12■■■□□ 2.89
DHFR-203ENST00000505337 SMG6Q86US8 1419 aaKnown RBP33.12■■■□□ 2.89
DHFR-203ENST00000505337 ANKRD36BQ8N2N9 1353 aa33.12■■■□□ 2.89
DHFR-203ENST00000505337 PRAM1Q96QH2 718 aa33.11■■■□□ 2.89
DHFR-203ENST00000505337 SLC12A5Q9H2X9 1139 aa33.11■■■□□ 2.89
DHFR-203ENST00000505337 ANKRD26Q9UPS8 1709 aa33.1■■■□□ 2.89
DHFR-203ENST00000505337 ABCC11Q96J66 1382 aa33.09■■■□□ 2.89
DHFR-203ENST00000505337 NCOA3Q9Y6Q9 1424 aa33.07■■■□□ 2.88
DHFR-203ENST00000505337 NEFLP07196 543 aa33.07■■■□□ 2.88
DHFR-203ENST00000505337 SAFB2Q14151 953 aaKnown RBP eCLIP33.07■■■□□ 2.88
DHFR-203ENST00000505337 TECPR2O15040 1411 aa33.07■■■□□ 2.88
DHFR-203ENST00000505337 ATAD2Q6PL18 1390 aa33.06■■■□□ 2.88
DHFR-203ENST00000505337 FKBP8Q14318 412 aa33.06■■■□□ 2.88
DHFR-203ENST00000505337 MSH6P52701 1360 aa33.04■■■□□ 2.88
DHFR-203ENST00000505337 CABP2Q9NPB3 220 aa33.04■■■□□ 2.88
DHFR-203ENST00000505337 POGKQ9P215 609 aa33.04■■■□□ 2.88
DHFR-203ENST00000505337 MINK1Q8N4C8 1332 aaPredicted RBP33.02■■■□□ 2.88
DHFR-203ENST00000505337 SHPRHQ149N8 1683 aa33.01■■■□□ 2.87
DHFR-203ENST00000505337 CD163L1Q9NR16 1453 aa33.01■■■□□ 2.87
DHFR-203ENST00000505337 KIF20BQ96Q89 1820 aa33■■■□□ 2.87
DHFR-203ENST00000505337 HSPA1LP34931 641 aa32.99■■■□□ 2.87
DHFR-203ENST00000505337 NSD2O96028 1365 aa32.99■■■□□ 2.87
DHFR-203ENST00000505337 PLEKHH1Q9ULM0 1364 aa32.99■■■□□ 2.87
DHFR-203ENST00000505337 FAM135BQ49AJ0 1406 aa32.99■■■□□ 2.87
DHFR-203ENST00000505337 A0A1W2PP64 1363 aa32.98■■■□□ 2.87
DHFR-203ENST00000505337 C14orf37Q86TY3 774 aa32.97■■■□□ 2.87
DHFR-203ENST00000505337 NUDCQ9Y266 331 aa32.97■■■□□ 2.87
DHFR-203ENST00000505337 SRPK2P78362 688 aaKnown RBP32.97■■■□□ 2.87
DHFR-203ENST00000505337 C19orf44Q9H6X5 657 aa32.97■■■□□ 2.87
DHFR-203ENST00000505337 CGNL1Q0VF96 1302 aa32.95■■■□□ 2.87
DHFR-203ENST00000505337 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.95■■■□□ 2.87
DHFR-203ENST00000505337 PTCH1Q13635 1447 aa32.94■■■□□ 2.86
DHFR-203ENST00000505337 ROBO2Q9HCK4 1378 aa32.94■■■□□ 2.86
DHFR-203ENST00000505337 ADGRB2O60241 1585 aa32.93■■■□□ 2.86
DHFR-203ENST00000505337 SLAIN2Q9P270 581 aa32.92■■■□□ 2.86
DHFR-203ENST00000505337 POLR3AO14802 1390 aaPredicted RBP32.91■■■□□ 2.86
DHFR-203ENST00000505337 SIRT1Q96EB6 747 aa32.9■■■□□ 2.86
DHFR-203ENST00000505337 ADAMTS8Q9UP79 889 aa32.9■■■□□ 2.86
DHFR-203ENST00000505337 ATP7BP35670 1465 aa32.9■■■□□ 2.86
DHFR-203ENST00000505337 SENP3-EIF4A1A0A087X0R7 540 aa32.89■■■□□ 2.86
DHFR-203ENST00000505337 WAPLQ7Z5K2 1190 aa32.89■■■□□ 2.86
DHFR-203ENST00000505337 CADPS2Q86UW7 1296 aa32.88■■■□□ 2.85
DHFR-203ENST00000505337 CDK19Q9BWU1 502 aa32.88■■■□□ 2.85
DHFR-203ENST00000505337 WDR43Q15061 677 aaKnown RBP eCLIP32.88■■■□□ 2.857e-6■■■■■ 27.3
DHFR-203ENST00000505337 ROBO1Q9Y6N7 1651 aa32.87■■■□□ 2.85
DHFR-203ENST00000505337 ATF3P18847 181 aa32.86■■■□□ 2.85
DHFR-203ENST00000505337 DCCP43146 1447 aa32.85■■■□□ 2.85
DHFR-203ENST00000505337 ADGRL3Q9HAR2 1447 aa32.85■■■□□ 2.85
DHFR-203ENST00000505337 MORC1Q86VD1 984 aa32.85■■■□□ 2.85
DHFR-203ENST00000505337 MON2Q7Z3U7 1717 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms