RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SOS2Q07890 1332 aaPredicted RBP29.5■■■□□ 2.31
UBE2D3-220ENST00000505307 STK26Q9P289 416 aa29.5■■■□□ 2.31
UBE2D3-220ENST00000505307 CDC42BPGQ6DT37 1551 aa29.49■■■□□ 2.31
UBE2D3-220ENST00000505307 TMEM132EQ6IEE7 984 aa29.46■■■□□ 2.31
UBE2D3-220ENST00000505307 SIRT1Q96EB6 747 aa29.46■■■□□ 2.31
UBE2D3-220ENST00000505307 C14orf93Q9H972 538 aaKnown RBP29.46■■■□□ 2.31
UBE2D3-220ENST00000505307 WAPLQ7Z5K2 1190 aa29.45■■■□□ 2.31
UBE2D3-220ENST00000505307 RXRBP28702 533 aa29.44■■■□□ 2.3
UBE2D3-220ENST00000505307 ESCO1Q5FWF5 840 aa29.44■■■□□ 2.3
UBE2D3-220ENST00000505307 YTHDC2Q9H6S0 1430 aaKnown RBP29.44■■■□□ 2.3
UBE2D3-220ENST00000505307 AFF2P51816 1311 aa29.44■■■□□ 2.3
UBE2D3-220ENST00000505307 NPHP3Q7Z494 1330 aa29.44■■■□□ 2.3
UBE2D3-220ENST00000505307 MYOM2P54296 1465 aa29.43■■■□□ 2.3
UBE2D3-220ENST00000505307 KNDC1Q76NI1 1749 aa29.43■■■□□ 2.3
UBE2D3-220ENST00000505307 HRCP23327 699 aa29.43■■■□□ 2.3
UBE2D3-220ENST00000505307 NRXN1Q9ULB1 1477 aa29.42■■■□□ 2.3
UBE2D3-220ENST00000505307 C8orf37Q96NL8 207 aa29.4■■■□□ 2.3
UBE2D3-220ENST00000505307 DHX57Q6P158 1386 aaKnown RBP29.39■■■□□ 2.3
UBE2D3-220ENST00000505307 CDK12Q9NYV4 1490 aaPredicted RBP29.37■■■□□ 2.29
UBE2D3-220ENST00000505307 PLEKHH1Q9ULM0 1364 aa29.37■■■□□ 2.29
UBE2D3-220ENST00000505307 CFAP70Q5T0N1 1121 aa29.36■■■□□ 2.29
UBE2D3-220ENST00000505307 NGLY1Q96IV0 654 aa29.35■■■□□ 2.29
UBE2D3-220ENST00000505307 ADAMTS2O95450 1211 aa29.34■■■□□ 2.29
UBE2D3-220ENST00000505307 FOXO3O43524 673 aa29.33■■■□□ 2.29
UBE2D3-220ENST00000505307 STAC3Q96MF2 364 aa29.33■■■□□ 2.29
UBE2D3-220ENST00000505307 QTRT2Q9H974 415 aaKnown RBP29.32■■■□□ 2.28
UBE2D3-220ENST00000505307 PXDNQ92626 1479 aa29.31■■■□□ 2.28
UBE2D3-220ENST00000505307 RBM6P78332 1123 aaKnown RBP29.31■■■□□ 2.28
UBE2D3-220ENST00000505307 NUTM2FA1L443 756 aa29.3■■■□□ 2.28
UBE2D3-220ENST00000505307 COL22A1Q8NFW1 1626 aaPredicted RBP29.3■■■□□ 2.28
UBE2D3-220ENST00000505307 FMN2Q9NZ56 1722 aa29.28■■■□□ 2.28
UBE2D3-220ENST00000505307 PRAM1Q96QH2 718 aa29.26■■■□□ 2.27
UBE2D3-220ENST00000505307 DLC1Q96QB1 1528 aa29.25■■■□□ 2.27
UBE2D3-220ENST00000505307 FNBP4Q8N3X1 1017 aaPredicted RBP29.25■■■□□ 2.27
UBE2D3-220ENST00000505307 XPCQ01831 940 aaPredicted RBP29.24■■■□□ 2.27
UBE2D3-220ENST00000505307 POGKQ9P215 609 aa29.24■■■□□ 2.27
UBE2D3-220ENST00000505307 USP21Q9UK80 565 aa29.24■■■□□ 2.27
UBE2D3-220ENST00000505307 KIF1AQ12756 1690 aa29.24■■■□□ 2.27
UBE2D3-220ENST00000505307 UPF1Q92900 1129 aaKnown RBP eCLIP29.23■■■□□ 2.27
UBE2D3-220ENST00000505307 DCAF11Q8TEB1 546 aa29.22■■■□□ 2.27
UBE2D3-220ENST00000505307 TRPC5Q9UL62 973 aaPredicted RBP29.22■■■□□ 2.27
UBE2D3-220ENST00000505307 PHF8Q9UPP1 1060 aa29.2■■■□□ 2.26
UBE2D3-220ENST00000505307 KDM2AQ9Y2K7 1162 aa29.2■■■□□ 2.26
UBE2D3-220ENST00000505307 SPATA31A3Q5VYP0 1347 aa29.2■■■□□ 2.26
UBE2D3-220ENST00000505307 ADGRB1O14514 1584 aa29.19■■■□□ 2.26
UBE2D3-220ENST00000505307 PSME1Q06323 249 aa29.19■■■□□ 2.26
UBE2D3-220ENST00000505307 KRT28Q7Z3Y7 464 aa29.19■■■□□ 2.26
UBE2D3-220ENST00000505307 SAFB2Q14151 953 aaKnown RBP eCLIP29.18■■■□□ 2.26
UBE2D3-220ENST00000505307 RGS12O14924 1447 aa29.17■■■□□ 2.26
UBE2D3-220ENST00000505307 ANKARQ7Z5J8 1434 aa29.15■■■□□ 2.26
UBE2D3-220ENST00000505307 TRAK1Q9UPV9 953 aa29.15■■■□□ 2.26
UBE2D3-220ENST00000505307 EIF3AQ14152 1382 aaKnown RBP29.13■■■□□ 2.25
UBE2D3-220ENST00000505307 ATRNO75882 1429 aa29.12■■■□□ 2.25
UBE2D3-220ENST00000505307 ADGRB2O60241 1585 aa29.12■■■□□ 2.25
UBE2D3-220ENST00000505307 SBNO1A3KN83 1393 aa29.11■■■□□ 2.25
UBE2D3-220ENST00000505307 TNS3Q68CZ2 1445 aa29.1■■■□□ 2.25
UBE2D3-220ENST00000505307 MARF1Q9Y4F3 1742 aaKnown RBP29.09■■■□□ 2.25
UBE2D3-220ENST00000505307 BCL9LQ86UU0 1499 aa29.09■■■□□ 2.25
UBE2D3-220ENST00000505307 RGPD8O14715 1765 aaPredicted RBP29.08■■■□□ 2.25
UBE2D3-220ENST00000505307 ARHGEF10O15013 1369 aa29.06■■■□□ 2.24
UBE2D3-220ENST00000505307 MINK1Q8N4C8 1332 aaPredicted RBP29.05■■■□□ 2.24
UBE2D3-220ENST00000505307 HAP1P54257 671 aaPredicted RBP29.05■■■□□ 2.24
UBE2D3-220ENST00000505307 HIRIP3Q9BW71 556 aaPredicted RBP29.05■■■□□ 2.24
UBE2D3-220ENST00000505307 WASLO00401 505 aaPredicted RBP29.04■■■□□ 2.24
UBE2D3-220ENST00000505307 ATAD2Q6PL18 1390 aa29.03■■■□□ 2.24
UBE2D3-220ENST00000505307 UNC5CLQ8IV45 518 aa29.03■■■□□ 2.24
UBE2D3-220ENST00000505307 PMFBP1Q8TBY8 1022 aa29.03■■■□□ 2.24
UBE2D3-220ENST00000505307 GJD4Q96KN9 370 aaPredicted RBP29.02■■■□□ 2.24
UBE2D3-220ENST00000505307 USP32Q8NFA0 1604 aa29.02■■■□□ 2.24
UBE2D3-220ENST00000505307 SLIT2O94813 1529 aa29.01■■■□□ 2.23
UBE2D3-220ENST00000505307 GPRASP1Q5JY77 1395 aa29.01■■■□□ 2.23
UBE2D3-220ENST00000505307 TULP4Q9NRJ4 1543 aa29■■■□□ 2.23
UBE2D3-220ENST00000505307 LMOD2Q6P5Q4 547 aa29■■■□□ 2.23
UBE2D3-220ENST00000505307 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.98■■■□□ 2.23
UBE2D3-220ENST00000505307 PRR36Q9H6K5 1346 aa28.97■■■□□ 2.23
UBE2D3-220ENST00000505307 CABLES1Q8TDN4 633 aa28.96■■■□□ 2.23
UBE2D3-220ENST00000505307 PLEKHG5O94827 1062 aa28.95■■■□□ 2.22
UBE2D3-220ENST00000505307 NGDNQ8NEJ9 315 aaKnown RBP28.93■■■□□ 2.22
UBE2D3-220ENST00000505307 ARHGEF28Q8N1W1 1705 aaKnown RBP28.93■■■□□ 2.22
UBE2D3-220ENST00000505307 KIAA1210Q9ULL0 1709 aa28.92■■■□□ 2.22
UBE2D3-220ENST00000505307 RALGAPBQ86X10 1494 aa28.91■■■□□ 2.22
UBE2D3-220ENST00000505307 VPS72Q15906 364 aa28.9■■■□□ 2.22
UBE2D3-220ENST00000505307 CCDC125Q86Z20 511 aa28.89■■■□□ 2.22
UBE2D3-220ENST00000505307 NUDT16Q96DE0 195 aaKnown RBP28.89■■■□□ 2.22
UBE2D3-220ENST00000505307 TRPM3Q9HCF6 1732 aaPredicted RBP28.89■■■□□ 2.21
UBE2D3-220ENST00000505307 ABCA3Q99758 1704 aa28.86■■■□□ 2.21
UBE2D3-220ENST00000505307 NWD2Q9ULI1 1742 aa28.86■■■□□ 2.21
UBE2D3-220ENST00000505307 CDK19Q9BWU1 502 aa28.86■■■□□ 2.21
UBE2D3-220ENST00000505307 ATP7BP35670 1465 aa28.85■■■□□ 2.21
UBE2D3-220ENST00000505307 GLI3P10071 1580 aa28.85■■■□□ 2.21
UBE2D3-220ENST00000505307 FAM83GA6ND36 823 aa28.85■■■□□ 2.21
UBE2D3-220ENST00000505307 ALS2Q96Q42 1657 aa28.85■■■□□ 2.21
UBE2D3-220ENST00000505307 ITSN1Q15811 1721 aa28.85■■■□□ 2.21
UBE2D3-220ENST00000505307 PAK3O75914 559 aaPredicted RBP28.83■■■□□ 2.21
UBE2D3-220ENST00000505307 NBPF1Q3BBV0 1214 aa28.83■■■□□ 2.21
UBE2D3-220ENST00000505307 CCDC61Q9Y6R9 512 aa28.83■■■□□ 2.21
UBE2D3-220ENST00000505307 PLCH1Q4KWH8 1693 aa28.81■■■□□ 2.2
UBE2D3-220ENST00000505307 ONECUT3O60422 494 aaPredicted RBP28.81■■■□□ 2.2
UBE2D3-220ENST00000505307 CCDC9Q9Y3X0 531 aaKnown RBP28.81■■■□□ 2.2
UBE2D3-220ENST00000505307 SEPT12Q8IYM1 358 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms