RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 ACIN1Q9UKV3 1341 aaKnown RBP33.51■■■□□ 2.95
CDC42SE2-207ENST00000504701 NRXN1Q9ULB1 1477 aa33.5■■■□□ 2.95
CDC42SE2-207ENST00000504701 LAMC1P11047 1609 aa33.5■■■□□ 2.95
CDC42SE2-207ENST00000504701 MYOM2P54296 1465 aa33.48■■■□□ 2.95
CDC42SE2-207ENST00000504701 YTHDC2Q9H6S0 1430 aaKnown RBP33.47■■■□□ 2.95
CDC42SE2-207ENST00000504701 PNPLA6Q8IY17 1366 aa33.47■■■□□ 2.95
CDC42SE2-207ENST00000504701 CFAP70Q5T0N1 1121 aa33.46■■■□□ 2.95
CDC42SE2-207ENST00000504701 ABCC11Q96J66 1382 aa33.46■■■□□ 2.95
CDC42SE2-207ENST00000504701 LRRC59Q96AG4 307 aaKnown RBP33.45■■■□□ 2.95
CDC42SE2-207ENST00000504701 C14orf93Q9H972 538 aaKnown RBP33.44■■■□□ 2.94
CDC42SE2-207ENST00000504701 NUTM2FA1L443 756 aa33.43■■■□□ 2.94
CDC42SE2-207ENST00000504701 SOS2Q07890 1332 aaPredicted RBP33.39■■■□□ 2.94
CDC42SE2-207ENST00000504701 ESCO1Q5FWF5 840 aa33.38■■■□□ 2.93
CDC42SE2-207ENST00000504701 FMN2Q9NZ56 1722 aa33.38■■■□□ 2.93
CDC42SE2-207ENST00000504701 XPCQ01831 940 aaPredicted RBP33.34■■■□□ 2.93
CDC42SE2-207ENST00000504701 AFF2P51816 1311 aa33.33■■■□□ 2.93
CDC42SE2-207ENST00000504701 KDM2AQ9Y2K7 1162 aa33.33■■■□□ 2.93
CDC42SE2-207ENST00000504701 RGPD8O14715 1765 aaPredicted RBP33.33■■■□□ 2.93
CDC42SE2-207ENST00000504701 PXDNQ92626 1479 aa33.32■■■□□ 2.92
CDC42SE2-207ENST00000504701 ZNF772Q68DY9 489 aaPredicted RBP33.32■■■□□ 2.92
CDC42SE2-207ENST00000504701 ADGRB1O14514 1584 aa33.31■■■□□ 2.92
CDC42SE2-207ENST00000504701 HRCP23327 699 aa33.31■■■□□ 2.92
CDC42SE2-207ENST00000504701 SAFB2Q14151 953 aaKnown RBP eCLIP33.31■■■□□ 2.92
CDC42SE2-207ENST00000504701 DHX57Q6P158 1386 aaKnown RBP33.31■■■□□ 2.92
CDC42SE2-207ENST00000504701 C8orf37Q96NL8 207 aa33.3■■■□□ 2.92
CDC42SE2-207ENST00000504701 FOXO3O43524 673 aa33.29■■■□□ 2.92
CDC42SE2-207ENST00000504701 ADAMTS2O95450 1211 aa33.28■■■□□ 2.92
CDC42SE2-207ENST00000504701 DCAF11Q8TEB1 546 aa33.28■■■□□ 2.92
CDC42SE2-207ENST00000504701 PRAM1Q96QH2 718 aa33.27■■■□□ 2.92
CDC42SE2-207ENST00000504701 COL22A1Q8NFW1 1626 aaPredicted RBP33.27■■■□□ 2.92
CDC42SE2-207ENST00000504701 NPHP3Q7Z494 1330 aa33.26■■■□□ 2.91
CDC42SE2-207ENST00000504701 SIRT1Q96EB6 747 aa33.25■■■□□ 2.91
CDC42SE2-207ENST00000504701 DLC1Q96QB1 1528 aa33.23■■■□□ 2.91
CDC42SE2-207ENST00000504701 KIF1AQ12756 1690 aa33.2■■■□□ 2.91
CDC42SE2-207ENST00000504701 TRAK1Q9UPV9 953 aa33.2■■■□□ 2.91
CDC42SE2-207ENST00000504701 USP32Q8NFA0 1604 aa33.19■■■□□ 2.9
CDC42SE2-207ENST00000504701 RXRBP28702 533 aa33.18■■■□□ 2.9
CDC42SE2-207ENST00000504701 POGKQ9P215 609 aa33.16■■■□□ 2.9
CDC42SE2-207ENST00000504701 NGLY1Q96IV0 654 aa33.15■■■□□ 2.9
CDC42SE2-207ENST00000504701 ADGRB2O60241 1585 aa33.14■■■□□ 2.9
CDC42SE2-207ENST00000504701 HIRIP3Q9BW71 556 aaPredicted RBP33.14■■■□□ 2.9
CDC42SE2-207ENST00000504701 QTRT2Q9H974 415 aaKnown RBP33.13■■■□□ 2.89
CDC42SE2-207ENST00000504701 MARF1Q9Y4F3 1742 aaKnown RBP33.13■■■□□ 2.89
CDC42SE2-207ENST00000504701 ARHGEF28Q8N1W1 1705 aaKnown RBP33.11■■■□□ 2.89
CDC42SE2-207ENST00000504701 MINK1Q8N4C8 1332 aaPredicted RBP33.1■■■□□ 2.89
CDC42SE2-207ENST00000504701 PHF8Q9UPP1 1060 aa33.1■■■□□ 2.89
CDC42SE2-207ENST00000504701 KRT28Q7Z3Y7 464 aa33.09■■■□□ 2.89
CDC42SE2-207ENST00000504701 RGS12O14924 1447 aa33.09■■■□□ 2.89
CDC42SE2-207ENST00000504701 SPATA31A3Q5VYP0 1347 aa33.08■■■□□ 2.89
CDC42SE2-207ENST00000504701 CDK12Q9NYV4 1490 aaPredicted RBP33.08■■■□□ 2.89
CDC42SE2-207ENST00000504701 PMFBP1Q8TBY8 1022 aa33.05■■■□□ 2.88
CDC42SE2-207ENST00000504701 USP21Q9UK80 565 aa33.05■■■□□ 2.88
CDC42SE2-207ENST00000504701 PRR36Q9H6K5 1346 aa33.04■■■□□ 2.88
CDC42SE2-207ENST00000504701 RBM6P78332 1123 aaKnown RBP33.03■■■□□ 2.88
CDC42SE2-207ENST00000504701 FNBP4Q8N3X1 1017 aaPredicted RBP33.03■■■□□ 2.88
CDC42SE2-207ENST00000504701 PLEKHG5O94827 1062 aa33.02■■■□□ 2.88
CDC42SE2-207ENST00000504701 ANKARQ7Z5J8 1434 aa33.02■■■□□ 2.88
CDC42SE2-207ENST00000504701 UPF1Q92900 1129 aaKnown RBP eCLIP33.01■■■□□ 2.87
CDC42SE2-207ENST00000504701 STAC3Q96MF2 364 aa33.01■■■□□ 2.87
CDC42SE2-207ENST00000504701 TNS3Q68CZ2 1445 aa33.01■■■□□ 2.87
CDC42SE2-207ENST00000504701 ATRNO75882 1429 aa32.99■■■□□ 2.87
CDC42SE2-207ENST00000504701 ABCA3Q99758 1704 aa32.99■■■□□ 2.87
CDC42SE2-207ENST00000504701 BCL9LQ86UU0 1499 aa32.99■■■□□ 2.87
CDC42SE2-207ENST00000504701 TULP4Q9NRJ4 1543 aa32.98■■■□□ 2.87
CDC42SE2-207ENST00000504701 CABLES1Q8TDN4 633 aa32.98■■■□□ 2.87
CDC42SE2-207ENST00000504701 TRPM3Q9HCF6 1732 aaPredicted RBP32.97■■■□□ 2.87
CDC42SE2-207ENST00000504701 KIAA1210Q9ULL0 1709 aa32.96■■■□□ 2.87
CDC42SE2-207ENST00000504701 WASLO00401 505 aaPredicted RBP32.95■■■□□ 2.87
CDC42SE2-207ENST00000504701 NBPF1Q3BBV0 1214 aa32.95■■■□□ 2.87
CDC42SE2-207ENST00000504701 PSME1Q06323 249 aa32.94■■■□□ 2.86
CDC42SE2-207ENST00000504701 TRPC5Q9UL62 973 aaPredicted RBP32.94■■■□□ 2.86
CDC42SE2-207ENST00000504701 SBNO1A3KN83 1393 aa32.93■■■□□ 2.86
CDC42SE2-207ENST00000504701 LMOD2Q6P5Q4 547 aa32.92■■■□□ 2.86
CDC42SE2-207ENST00000504701 SIN3AQ96ST3 1273 aa32.9■■■□□ 2.86
CDC42SE2-207ENST00000504701 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.89■■■□□ 2.86
CDC42SE2-207ENST00000504701 ALS2Q96Q42 1657 aa32.89■■■□□ 2.86
CDC42SE2-207ENST00000504701 SLIT2O94813 1529 aa32.89■■■□□ 2.86
CDC42SE2-207ENST00000504701 ATP7BP35670 1465 aa32.89■■■□□ 2.86
CDC42SE2-207ENST00000504701 PLCH1Q4KWH8 1693 aa32.86■■■□□ 2.85
CDC42SE2-207ENST00000504701 EIF3AQ14152 1382 aaKnown RBP32.85■■■□□ 2.85
CDC42SE2-207ENST00000504701 ITSN1Q15811 1721 aa32.85■■■□□ 2.85
CDC42SE2-207ENST00000504701 ARHGEF10O15013 1369 aa32.83■■■□□ 2.85
CDC42SE2-207ENST00000504701 GLI3P10071 1580 aa32.83■■■□□ 2.85
CDC42SE2-207ENST00000504701 HAP1P54257 671 aaPredicted RBP32.83■■■□□ 2.85
CDC42SE2-207ENST00000504701 L3MBTL2Q969R5 705 aa32.83■■■□□ 2.85
CDC42SE2-207ENST00000504701 NUDT16Q96DE0 195 aaKnown RBP32.82■■■□□ 2.84
CDC42SE2-207ENST00000504701 TOPAZ1Q8N9V7 1692 aa32.82■■■□□ 2.84
CDC42SE2-207ENST00000504701 CDK19Q9BWU1 502 aa32.81■■■□□ 2.84
CDC42SE2-207ENST00000504701 CRYBG1Q9Y4K1 1723 aa32.8■■■□□ 2.84
CDC42SE2-207ENST00000504701 UNC5CLQ8IV45 518 aa32.8■■■□□ 2.84
CDC42SE2-207ENST00000504701 GPRASP1Q5JY77 1395 aa32.8■■■□□ 2.84
CDC42SE2-207ENST00000504701 NGDNQ8NEJ9 315 aaKnown RBP32.79■■■□□ 2.84
CDC42SE2-207ENST00000504701 GJD4Q96KN9 370 aaPredicted RBP32.79■■■□□ 2.84
CDC42SE2-207ENST00000504701 RALGAPBQ86X10 1494 aa32.79■■■□□ 2.84
CDC42SE2-207ENST00000504701 NEUROD1Q13562 356 aa32.77■■■□□ 2.84
CDC42SE2-207ENST00000504701 NWD2Q9ULI1 1742 aa32.76■■■□□ 2.83
CDC42SE2-207ENST00000504701 QRICH2Q9H0J4 1663 aa32.75■■■□□ 2.83
CDC42SE2-207ENST00000504701 TRPM1Q7Z4N2 1603 aa32.74■■■□□ 2.83
CDC42SE2-207ENST00000504701 FAM83GA6ND36 823 aa32.73■■■□□ 2.83
CDC42SE2-207ENST00000504701 PAK3O75914 559 aaPredicted RBP32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms